BLASTX nr result

ID: Dioscorea21_contig00002943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002943
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001141179.1| uncharacterized protein LOC100273266 [Zea ma...   252   2e-65
ref|NP_001146933.1| nifU-like N-terminal domain-containing prote...   252   3e-65
gb|ACF83495.1| unknown [Zea mays] gi|414881115|tpg|DAA58246.1| T...   252   3e-65
ref|XP_004152478.1| PREDICTED: iron-sulfur cluster assembly prot...   251   3e-65
ref|XP_002458268.1| hypothetical protein SORBIDRAFT_03g030300 [S...   251   3e-65

>ref|NP_001141179.1| uncharacterized protein LOC100273266 [Zea mays]
           gi|194702780|gb|ACF85474.1| unknown [Zea mays]
           gi|194703112|gb|ACF85640.1| unknown [Zea mays]
           gi|195617538|gb|ACG30599.1| nifU-like N-terminal
           domain-containing protein [Zea mays]
           gi|195639094|gb|ACG39015.1| nifU-like N-terminal
           domain-containing protein [Zea mays]
           gi|413950825|gb|AFW83474.1| nifU-like domain-containing
           protein [Zea mays]
          Length = 180

 Score =  252 bits (644), Expect = 2e-65
 Identities = 128/148 (86%), Positives = 133/148 (89%), Gaps = 2/148 (1%)
 Frame = +3

Query: 6   RLLGLGFGR-GTPSPAMTVA-RRGYHERVVDHYNNPRNVGSFDKNDPSVGTGLVGAPACG 179
           R LGLG G  G   PA   A  R YHERVVDHYNNPRNVGSFDK DP+VGTGLVGAPACG
Sbjct: 15  RRLGLGTGAAGQVGPAAAAAGMRAYHERVVDHYNNPRNVGSFDKEDPNVGTGLVGAPACG 74

Query: 180 DVMKLQIKVDDESGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHL 359
           DVMKLQI+VD++SGKIVDACFKTFGCGSAIASSSVATEWVKGK M+EVLTIKNTEIAKHL
Sbjct: 75  DVMKLQIRVDEDSGKIVDACFKTFGCGSAIASSSVATEWVKGKPMDEVLTIKNTEIAKHL 134

Query: 360 SLPPVKLHCSMLAEDAIKAAVKDYEAKK 443
           SLPPVKLHCSMLAEDAIKAAVKDYEAKK
Sbjct: 135 SLPPVKLHCSMLAEDAIKAAVKDYEAKK 162


>ref|NP_001146933.1| nifU-like N-terminal domain-containing protein [Zea mays]
           gi|195605342|gb|ACG24501.1| nifU-like N-terminal
           domain-containing protein [Zea mays]
          Length = 180

 Score =  252 bits (643), Expect = 3e-65
 Identities = 128/148 (86%), Positives = 133/148 (89%), Gaps = 2/148 (1%)
 Frame = +3

Query: 6   RLLGLGFGR-GTPSPAMTVAR-RGYHERVVDHYNNPRNVGSFDKNDPSVGTGLVGAPACG 179
           R LGLG G  G   PA   A  R YHERVVDHYNNPRNVGSFDK+DP+VGTGLVGAPACG
Sbjct: 15  RRLGLGTGASGEAGPAAAAAGVRAYHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACG 74

Query: 180 DVMKLQIKVDDESGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHL 359
           DVMKLQI+VD+ SGKIVDACFKTFGCGSAIASSSVATEWVKGK M+EVLTIKNTEIAKHL
Sbjct: 75  DVMKLQIRVDENSGKIVDACFKTFGCGSAIASSSVATEWVKGKPMDEVLTIKNTEIAKHL 134

Query: 360 SLPPVKLHCSMLAEDAIKAAVKDYEAKK 443
           SLPPVKLHCSMLAEDAIKAAVKDYEAKK
Sbjct: 135 SLPPVKLHCSMLAEDAIKAAVKDYEAKK 162


>gb|ACF83495.1| unknown [Zea mays] gi|414881115|tpg|DAA58246.1| TPA: nifU-like
           domain-containing protein [Zea mays]
          Length = 180

 Score =  252 bits (643), Expect = 3e-65
 Identities = 128/148 (86%), Positives = 133/148 (89%), Gaps = 2/148 (1%)
 Frame = +3

Query: 6   RLLGLGFGR-GTPSPAMTVAR-RGYHERVVDHYNNPRNVGSFDKNDPSVGTGLVGAPACG 179
           R LGLG G  G   PA   A  R YHERVVDHYNNPRNVGSFDK+DP+VGTGLVGAPACG
Sbjct: 15  RRLGLGTGASGEAGPAAAAAGVRAYHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACG 74

Query: 180 DVMKLQIKVDDESGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHL 359
           DVMKLQI+VD+ SGKIVDACFKTFGCGSAIASSSVATEWVKGK M+EVLTIKNTEIAKHL
Sbjct: 75  DVMKLQIRVDENSGKIVDACFKTFGCGSAIASSSVATEWVKGKPMDEVLTIKNTEIAKHL 134

Query: 360 SLPPVKLHCSMLAEDAIKAAVKDYEAKK 443
           SLPPVKLHCSMLAEDAIKAAVKDYEAKK
Sbjct: 135 SLPPVKLHCSMLAEDAIKAAVKDYEAKK 162


>ref|XP_004152478.1| PREDICTED: iron-sulfur cluster assembly protein 1-like [Cucumis
           sativus] gi|449520487|ref|XP_004167265.1| PREDICTED:
           iron-sulfur cluster assembly protein 1-like [Cucumis
           sativus]
          Length = 170

 Score =  251 bits (642), Expect = 3e-65
 Identities = 121/147 (82%), Positives = 136/147 (92%)
 Frame = +3

Query: 3   KRLLGLGFGRGTPSPAMTVARRGYHERVVDHYNNPRNVGSFDKNDPSVGTGLVGAPACGD 182
           KRLLG+   +  PSPA+ +  R YHERV+DHYNNPRNVGSFDKNDP+VGTGLVGAPACGD
Sbjct: 7   KRLLGIA-SKDLPSPAVQIVPRFYHERVIDHYNNPRNVGSFDKNDPTVGTGLVGAPACGD 65

Query: 183 VMKLQIKVDDESGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHLS 362
           VMKLQIK+D+++GK+VDACFKTFGCGSAIASSS+ATE VKGKQM+E LTIKN+EIAKHLS
Sbjct: 66  VMKLQIKIDEKTGKVVDACFKTFGCGSAIASSSLATEMVKGKQMDEALTIKNSEIAKHLS 125

Query: 363 LPPVKLHCSMLAEDAIKAAVKDYEAKK 443
           LPPVKLHCSMLAEDAIKAAVKDYEAK+
Sbjct: 126 LPPVKLHCSMLAEDAIKAAVKDYEAKR 152


>ref|XP_002458268.1| hypothetical protein SORBIDRAFT_03g030300 [Sorghum bicolor]
           gi|241930243|gb|EES03388.1| hypothetical protein
           SORBIDRAFT_03g030300 [Sorghum bicolor]
          Length = 181

 Score =  251 bits (642), Expect = 3e-65
 Identities = 125/145 (86%), Positives = 130/145 (89%), Gaps = 1/145 (0%)
 Frame = +3

Query: 12  LGLGFGRGTPSPAMTVAR-RGYHERVVDHYNNPRNVGSFDKNDPSVGTGLVGAPACGDVM 188
           LG G   G   PA   A  R YHERVVDHYNNPRNVGSFDK DP+VGTGLVGAPACGDVM
Sbjct: 19  LGTGAAAGEAGPAAAAAGVRAYHERVVDHYNNPRNVGSFDKEDPNVGTGLVGAPACGDVM 78

Query: 189 KLQIKVDDESGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHLSLP 368
           KLQI+VD++SGKIVDACFKTFGCGSAIASSSVATEWVKGK M+EVLTIKNTEIAKHLSLP
Sbjct: 79  KLQIRVDEDSGKIVDACFKTFGCGSAIASSSVATEWVKGKPMDEVLTIKNTEIAKHLSLP 138

Query: 369 PVKLHCSMLAEDAIKAAVKDYEAKK 443
           PVKLHCSMLAEDAIKAAVKDYEAKK
Sbjct: 139 PVKLHCSMLAEDAIKAAVKDYEAKK 163


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