BLASTX nr result

ID: Dioscorea21_contig00002938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002938
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vi...    95   8e-18
emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]    95   8e-18
ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Br...    87   1e-15
gb|AEV43357.1| auxin-response factor [Citrus sinensis]                 82   4e-14
gb|AFW60887.1| auxin response factor [Zea mays]                        74   1e-11

>ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
            gi|297734502|emb|CBI15749.3| unnamed protein product
            [Vitis vinifera]
          Length = 862

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
 Frame = -1

Query: 532  ASHLKSHFQDQDGRLKSLSGSWSMMPPNIPF-IMESNMKMAPQPGELPYSGLGSIRFXXX 356
            A+ +K H +  + +   L+G WSMMP  +   ++ES++K+  Q  ++PY   G  RF   
Sbjct: 535  ANTMKKHLE-HESKFNLLAGPWSMMPSGLSLNLLESSIKVPVQGSDMPYQTRGDARFGGF 593

Query: 355  XXXXXXG---VEQHSPNWLSHLLPPAQ--IETTSHPRVLKPQPMMANHTEGAKPKGSGNC 191
                      VE    NWL  + PPAQ   E  +H R L P+P++    E  KPK  GNC
Sbjct: 594  SEYPTLHGHRVELQQGNWL--MPPPAQSHFENFAHSRELMPKPILVQKQEAVKPK-DGNC 650

Query: 190  KLFGIHLNSNPT-SGQVISHRSASYEPESHSHLVATLNESQAVEVNQQQEHLKG-KSVDA 17
            KLFGI L  NP  S   +S+RS + EP  H HL  +     A + +Q+ E  KG KS D 
Sbjct: 651  KLFGIPLIGNPVISEPAMSYRSMTNEPAGHLHLAPS-----AFDSDQKSEQSKGAKSTDN 705

Query: 16   GAASS 2
              A S
Sbjct: 706  PLAVS 710


>emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
          Length = 946

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
 Frame = -1

Query: 532  ASHLKSHFQDQDGRLKSLSGSWSMMPPNIPF-IMESNMKMAPQPGELPYSGLGSIRFXXX 356
            A+ +K H +  + +   L+G WSMMP  +   ++ES++K+  Q  ++PY   G  RF   
Sbjct: 535  ANTMKKHLE-HESKFNLLAGPWSMMPSGLSLNLLESSIKVPVQGSDMPYQTRGDARFGGF 593

Query: 355  XXXXXXG---VEQHSPNWLSHLLPPAQ--IETTSHPRVLKPQPMMANHTEGAKPKGSGNC 191
                      VE    NWL  + PPAQ   E  +H R L P+P++    E  KPK  GNC
Sbjct: 594  SEYPTLHGHRVELQQGNWL--MPPPAQSHFENFAHSRELMPKPILVQKQEAVKPK-DGNC 650

Query: 190  KLFGIHLNSNPT-SGQVISHRSASYEPESHSHLVATLNESQAVEVNQQQEHLKG-KSVDA 17
            KLFGI L  NP  S   +S+RS + EP  H HL  +     A + +Q+ E  KG KS D 
Sbjct: 651  KLFGIPLIGNPVISEPAMSYRSMTNEPAGHLHLAPS-----AFDSDQKSEQSKGAKSTDN 705

Query: 16   GAASS 2
              A S
Sbjct: 706  PLAVS 710


>ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
          Length = 882

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
 Frame = -1

Query: 523  LKSHFQDQDGRLKSLSGSWSMMPPNIPF-IMESNMKMAPQPGELPYSGLGS-IRFXXXXX 350
            + +H+QDQ G   +  GSWS+MP N  F + + N  M  +   LP     +         
Sbjct: 555  VNAHYQDQQGSHSTFPGSWSLMPQNTGFGLNKQNYPMMQEVAGLPQRAANTKFGNGGYAA 614

Query: 349  XXXXGVEQHSPNWLSHLLPPAQIETTSHPRVLKPQPMMANHTEGAKPKGSGNCKLFGIHL 170
                G +Q+S  W  H++P + ++ T  PRV+KPQP++  H +  K KG+ +CKLFGIHL
Sbjct: 615  LPGRGFDQYSTGWFGHMMPSSHMDDT-QPRVIKPQPLVVGHGDMQKTKGA-SCKLFGIHL 672

Query: 169  NSNPTSGQVISHRSASYEPESHSHLVATLNESQAVEVNQQQEHLK-GKSVDAGAASS 2
            +S   S  + S  S +Y+   H+   A L    A E  +  +  K  K +DA  A S
Sbjct: 673  DSPAKSEPLKSPPSVAYDGMPHTPGSAELCRMDATEPEKCYDPSKTPKPLDAPYADS 729


>gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
 Frame = -1

Query: 535  EASHLKSHFQDQDGRLKSLSGSWSMMPPNIPFIM-ESNMKMAPQPGELPYSGLGSIR--- 368
            +A  ++    DQ+G+   ++  WS+MP      M ESN K+  Q G++ Y   G++R   
Sbjct: 520  DAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGG 579

Query: 367  FXXXXXXXXXGVEQHSPNWLSHLLPPAQIETTSHPRVLKPQPMMANHTEGAKPKGSGNCK 188
            F          VE    NWL   LPP+  E ++H R L P+  M    E  K K   +CK
Sbjct: 580  FGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK---DCK 636

Query: 187  LFGIHLNSNPTSGQ-VISHRSASYEPESHSHLVATLNESQAVEVNQQQEHLKGKSV 23
            LFGI L SN    + V+SHR+   EP  +        + +A E +Q+ EH K   +
Sbjct: 637  LFGIPLFSNHVMPEPVVSHRNTMNEPAGNLD-----QQFRAFESDQKSEHSKSSKL 687


>gb|AFW60887.1| auxin response factor [Zea mays]
          Length = 849

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
 Frame = -1

Query: 523  LKSHFQDQDGRLKSLSGSWSMMPPNIPFIM-ESNMKMAPQPGELPYSGLGS-IRFXXXXX 350
            + +H+QDQ G      GSWSMMP +  F M   +  M  + G +  S   +         
Sbjct: 527  VNAHYQDQQGNHNLFPGSWSMMPSSTGFGMNRQSYPMIQEVGGMSQSCTNTKFGNGVYAA 586

Query: 349  XXXXGVEQHSPNWLSHLLPPAQIETTSHPRVLKPQPMMANHTEGAKPKGSGNCKLFGIHL 170
                G++++   W  H  P  +++  + PRV+KPQP++  H E  K KG+ +CKLFGIHL
Sbjct: 587  LPGRGIDRYPSGWFGHTTPGGRVD-DAQPRVIKPQPLVLAHGEALKMKGN-SCKLFGIHL 644

Query: 169  NSNPTSGQVISHRSASYEPESHSHLVATLNESQAVEVNQQQEHLKGKSVD 20
            +S P   + +    +   P +   +   ++  ++ E ++  + L    VD
Sbjct: 645  DS-PAKSEPLKSPPSVATPAAEKWMADGIDADKSPEPHKTPKQLGATQVD 693


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