BLASTX nr result

ID: Dioscorea21_contig00002932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002932
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001168054.1| putative DEAD-box ATP-dependent RNA helicase...    91   7e-17
ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
gb|AFW80160.1| putative DEAD-box ATP-dependent RNA helicase fami...    89   3e-16
ref|NP_001183594.1| uncharacterized protein LOC100502188 [Zea ma...    89   3e-16
ref|XP_002884587.1| hypothetical protein ARALYDRAFT_477953 [Arab...    89   4e-16

>ref|NP_001168054.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
           mays] gi|223945725|gb|ACN26946.1| unknown [Zea mays]
           gi|414876118|tpg|DAA53249.1| TPA: putative DEAD-box
           ATP-dependent RNA helicase family protein [Zea mays]
          Length = 672

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 37/51 (72%), Positives = 46/51 (90%)
 Frame = -3

Query: 249 MTAAASNPASSEPRYAPDDPSLPKPWKGLVDGSTGYIYYWNPVTNVTQYER 97
           MT++AS PAS+ PRYAP DP+LPKPW+GL+DG+TGY+Y+WNP T VTQYER
Sbjct: 1   MTSSASAPASNGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYER 51


>ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|222867004|gb|EEF04135.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = -3

Query: 249 MTAAASNPASSEPRYAPDDPSLPKPWKGLVDGSTGYIYYWNPVTNVTQYER 97
           MTAAA+  +S+ PRYAPDDP+LPKPW+GLVDG TGY+Y+WNP TNVTQYER
Sbjct: 1   MTAAATT-SSAGPRYAPDDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYER 50


>gb|AFW80160.1| putative DEAD-box ATP-dependent RNA helicase family protein,
           partial [Zea mays]
          Length = 232

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = -3

Query: 249 MTAAASNPASSEPRYAPDDPSLPKPWKGLVDGSTGYIYYWNPVTNVTQYER 97
           M ++AS PAS+ PRYAP DP+LPKPW+GL+DG+TGY+Y+WNP T VTQYER
Sbjct: 1   MASSASAPASTGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYER 51


>ref|NP_001183594.1| uncharacterized protein LOC100502188 [Zea mays]
           gi|238013292|gb|ACR37681.1| unknown [Zea mays]
          Length = 131

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = -3

Query: 249 MTAAASNPASSEPRYAPDDPSLPKPWKGLVDGSTGYIYYWNPVTNVTQYER 97
           M ++AS PAS+ PRYAP DP+LPKPW+GL+DG+TGY+Y+WNP T VTQYER
Sbjct: 1   MASSASAPASTGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYER 51


>ref|XP_002884587.1| hypothetical protein ARALYDRAFT_477953 [Arabidopsis lyrata subsp.
           lyrata] gi|297330427|gb|EFH60846.1| hypothetical protein
           ARALYDRAFT_477953 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 36/51 (70%), Positives = 43/51 (84%)
 Frame = -3

Query: 249 MTAAASNPASSEPRYAPDDPSLPKPWKGLVDGSTGYIYYWNPVTNVTQYER 97
           M    + PAS+ PRYAP+DP+LP+PWKGL+DGSTG +YYWNP TNVTQYER
Sbjct: 1   MATTEATPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYER 51


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