BLASTX nr result
ID: Dioscorea21_contig00002910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002910
(1432 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like ... 297 5e-78
gb|ABK94247.1| unknown [Populus trichocarpa] 284 4e-74
ref|XP_002320819.1| predicted protein [Populus trichocarpa] gi|2... 283 8e-74
ref|XP_002511905.1| conserved hypothetical protein [Ricinus comm... 278 2e-72
gb|ABB16971.1| unknown [Solanum tuberosum] 277 6e-72
>ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like [Vitis vinifera]
Length = 350
Score = 297 bits (760), Expect = 5e-78
Identities = 173/347 (49%), Positives = 227/347 (65%), Gaps = 1/347 (0%)
Frame = -3
Query: 1292 FGNP-RGFFSKKPYLSPELLSLLHVFEQNLAESLRKLMAVDNKDVLSLSWMRVAMDTLCT 1116
FGNP R K YLSP LLSLL+ FE LAE LRKL +DVLS SWM++AM+ LC
Sbjct: 14 FGNPFRMILPKGSYLSPRLLSLLNDFENTLAERLRKLKPKGTEDVLSCSWMKLAMELLCE 73
Query: 1115 IHDSLKTLITDLKFPSSDWDNKWINMYLEDSVKLLDVCIALISEVSRLDQCQLFLRYSLH 936
IH +K LITDL+ P DWD+KWI++YL++SVKLLD+CIAL SE+SRL+Q L L+ L
Sbjct: 74 IHKDIKILITDLELPVCDWDDKWIDVYLDNSVKLLDICIALSSELSRLNQGHLLLQCVLR 133
Query: 935 LLDPANNYPPEKAKKAHTCLQDWMQKIKSRSPKLENCPATLQVLERSLYLGKVKDSAKGE 756
LD A+ P++ +A + L W Q I S++PKL+NC L L S+ L K+K+SAKG+
Sbjct: 134 NLDTAS---PKQLVRARSSLDSWRQHIGSKNPKLQNCLTILDSLAESINLPKIKNSAKGK 190
Query: 755 ILGRALYGLKVVTVFICSLLVAAFSGHSKPLLLNLDVPRKFTWSVAFTDLQAYVNNEILN 576
+L RA+YG++V TVF+CS+ AAF+G S L++L V F WS AFTDLQ+YVN EI N
Sbjct: 191 VLMRAMYGVRVGTVFVCSVFAAAFTG-SANKLIDLHVADTFLWSEAFTDLQSYVNVEIRN 249
Query: 575 LFPSGKVASPREVEAVRIAVEKFTISNHVDCNEEALAPVRNSTQEEEGLQVTVSKLIKSA 396
F SG+V +E+EAV ++ K ++ + P + T Q +VS L KS
Sbjct: 250 TFSSGRVTVLKELEAVDTSINKL-----YPMVQDGVGPAEDGT-----FQNSVSDLGKSV 299
Query: 395 EELDRGLDLLSKQVNTFFKIVLTGRDALLNTLRGSDFTPESNKDANL 255
E+L GLDLL+K V+ FF++VLTGRDALL LR S E N A +
Sbjct: 300 EKLSEGLDLLTKDVDGFFQMVLTGRDALLCNLRVSPM-HEDNTQARI 345
>gb|ABK94247.1| unknown [Populus trichocarpa]
Length = 354
Score = 284 bits (727), Expect = 4e-74
Identities = 167/359 (46%), Positives = 228/359 (63%), Gaps = 1/359 (0%)
Frame = -3
Query: 1331 MSQTHHGQWTFRQFGNPRGFFSKK-PYLSPELLSLLHVFEQNLAESLRKLMAVDNKDVLS 1155
MSQ F FGNP S K LSP LLSLL+ FE+ LA LRKL D DVLS
Sbjct: 1 MSQPQQPHRPFFPFGNPFRMLSPKGSQLSPRLLSLLNTFEEALAARLRKLNPKDKGDVLS 60
Query: 1154 LSWMRVAMDTLCTIHDSLKTLITDLKFPSSDWDNKWINMYLEDSVKLLDVCIALISEVSR 975
+WM++AM++LC H +KTLIT+L+ P ++WD KWI++YL+ +VKLLD+CIA SE+S
Sbjct: 61 FTWMKLAMESLCETHTVIKTLITELELPVTEWDEKWIDVYLDITVKLLDICIAFSSELSW 120
Query: 974 LDQCQLFLRYSLHLLDPANNYPPEKAKKAHTCLQDWMQKIKSRSPKLENCPATLQVLERS 795
L+Q QLFL+ +LH L+ N+ EK +A + L W Q I S++P+LENC + L+ L S
Sbjct: 121 LNQGQLFLQCALHKLESNNS---EKLMQACSSLDSWRQHIGSKNPRLENCKSILENLVDS 177
Query: 794 LYLGKVKDSAKGEILGRALYGLKVVTVFICSLLVAAFSGHSKPLLLNLDVPRKFTWSVAF 615
L L KVK+SAKG++L RA+YG+KV TVF+CS+ AAFS +SK L++LDVP W+ A+
Sbjct: 178 LTLPKVKNSAKGKVLMRAMYGVKVQTVFVCSVFAAAFSVNSKN-LIDLDVPNTILWAQAY 236
Query: 614 TDLQAYVNNEILNLFPSGKVASPREVEAVRIAVEKFTISNHVDCNEEALAPVRNSTQEEE 435
+DLQ VN EI +F GK +E++ V V +N ++ + P E E
Sbjct: 237 SDLQTTVNGEIREVFSRGKFTFLKELDEVETVV-----NNLYPMIQDGMGPT-----EVE 286
Query: 434 GLQVTVSKLIKSAEELDRGLDLLSKQVNTFFKIVLTGRDALLNTLRGSDFTPESNKDAN 258
+ S L + AE L + LD L+K+V+ FFKIVL+GRDALL LR SD + + +N
Sbjct: 287 AFSSSFSDLGRRAERLSQVLDFLAKEVDGFFKIVLSGRDALLCNLRVSDTVADPFRGSN 345
>ref|XP_002320819.1| predicted protein [Populus trichocarpa] gi|222861592|gb|EEE99134.1|
predicted protein [Populus trichocarpa]
Length = 338
Score = 283 bits (724), Expect = 8e-74
Identities = 166/349 (47%), Positives = 224/349 (64%), Gaps = 1/349 (0%)
Frame = -3
Query: 1331 MSQTHHGQWTFRQFGNPRGFFSKK-PYLSPELLSLLHVFEQNLAESLRKLMAVDNKDVLS 1155
MSQ F FGNP S K LSP LLSLL+ FE+ LA LRKL D DVLS
Sbjct: 1 MSQPQQPHRPFFPFGNPFRMLSPKGSQLSPRLLSLLNTFEEALAARLRKLNPKDKGDVLS 60
Query: 1154 LSWMRVAMDTLCTIHDSLKTLITDLKFPSSDWDNKWINMYLEDSVKLLDVCIALISEVSR 975
+WM++AM++LC H +KTLIT+L+ P ++WD KWI++YL+ +VKLLD+CIA SE+S
Sbjct: 61 FTWMKLAMESLCETHTVIKTLITELELPVTEWDEKWIDVYLDITVKLLDICIAFSSELSW 120
Query: 974 LDQCQLFLRYSLHLLDPANNYPPEKAKKAHTCLQDWMQKIKSRSPKLENCPATLQVLERS 795
L+Q QLFL+ +LH L+ N+ EK +A + L W Q I S++P+LENC + L+ L S
Sbjct: 121 LNQGQLFLQCALHKLESNNS---EKLMQACSSLDSWRQHIGSKNPRLENCKSILENLVDS 177
Query: 794 LYLGKVKDSAKGEILGRALYGLKVVTVFICSLLVAAFSGHSKPLLLNLDVPRKFTWSVAF 615
L L KVK+SAKG++L RA+YG+KV TVF+CS+ AAFS +SK L++LDVP W+ A+
Sbjct: 178 LTLPKVKNSAKGKVLMRAMYGVKVQTVFVCSVFAAAFSVNSKN-LIDLDVPNTILWAQAY 236
Query: 614 TDLQAYVNNEILNLFPSGKVASPREVEAVRIAVEKFTISNHVDCNEEALAPVRNSTQEEE 435
+DLQ VN EI +F GK +E++ V V +N ++ + P E E
Sbjct: 237 SDLQTTVNGEIREVFSRGKFTFLKELDEVETVV-----NNLYPMIQDGMGPT-----EVE 286
Query: 434 GLQVTVSKLIKSAEELDRGLDLLSKQVNTFFKIVLTGRDALLNTLRGSD 288
+ S L + AE L + LD L+K+V+ FFKIVL+GRDALL LR SD
Sbjct: 287 AFSSSFSDLGRRAERLSQVLDFLAKEVDGFFKIVLSGRDALLCNLRVSD 335
>ref|XP_002511905.1| conserved hypothetical protein [Ricinus communis]
gi|223549085|gb|EEF50574.1| conserved hypothetical
protein [Ricinus communis]
Length = 381
Score = 278 bits (712), Expect = 2e-72
Identities = 166/360 (46%), Positives = 226/360 (62%), Gaps = 1/360 (0%)
Frame = -3
Query: 1331 MSQTHHGQWTFRQFGNPRGFFSKK-PYLSPELLSLLHVFEQNLAESLRKLMAVDNKDVLS 1155
MS F FGNP S K L+P LLSLL+ FE+ L E L+KL+ D DVLS
Sbjct: 1 MSTPQEPHRPFFSFGNPFRMMSPKGSQLTPRLLSLLNAFEETLVERLKKLIPKDKDDVLS 60
Query: 1154 LSWMRVAMDTLCTIHDSLKTLITDLKFPSSDWDNKWINMYLEDSVKLLDVCIALISEVSR 975
L+WM+ AM++LC H +KTLITDL+ P ++WD KWI++YL+ SVKLLD+CIA SE+SR
Sbjct: 61 LTWMKSAMESLCETHTDIKTLITDLELPVANWDEKWIDVYLDISVKLLDICIAFSSELSR 120
Query: 974 LDQCQLFLRYSLHLLDPANNYPPEKAKKAHTCLQDWMQKIKSRSPKLENCPATLQVLERS 795
L+Q L L+ LH L+ + ++ +A L W Q I S++ ++ENC + L+ L S
Sbjct: 121 LNQGHLLLQCVLHNLESNTS---KQFVRASASLDSWRQHISSKNQRVENCRSILENLRGS 177
Query: 794 LYLGKVKDSAKGEILGRALYGLKVVTVFICSLLVAAFSGHSKPLLLNLDVPRKFTWSVAF 615
L L KVK+SAKG++L RA+YG+KV TVF+CS+ AAFS SK LL+ LDV W+ AF
Sbjct: 178 LNLPKVKNSAKGKVLMRAMYGVKVQTVFLCSVFAAAFSNSSKNLLV-LDVSDTIKWAQAF 236
Query: 614 TDLQAYVNNEILNLFPSGKVASPREVEAVRIAVEKFTISNHVDCNEEALAPVRNSTQEEE 435
+DLQ +N EI F GK +E++AV V+K ++ + PV E E
Sbjct: 237 SDLQTNLNVEIREKFCHGKFTVLKELDAVDSIVKKL-----YPMIQDGVGPV-----EVE 286
Query: 434 GLQVTVSKLIKSAEELDRGLDLLSKQVNTFFKIVLTGRDALLNTLRGSDFTPESNKDANL 255
+ +VS L K +E+L +GLDLL+KQV+ FFKIVL+GRDALL LR S ++ N+
Sbjct: 287 AFENSVSDLRKGSEKLSQGLDLLAKQVDGFFKIVLSGRDALLCKLRESGAVNDTTLGTNV 346
>gb|ABB16971.1| unknown [Solanum tuberosum]
Length = 352
Score = 277 bits (708), Expect = 6e-72
Identities = 155/348 (44%), Positives = 221/348 (63%), Gaps = 3/348 (0%)
Frame = -3
Query: 1331 MSQTHHGQWTFRQFGNPRGFFSKK-PYLSPELLSLLHVFEQNLAESLRKLMAVDNKDVLS 1155
MS+ F FGNP F K YLSP+LL+LL+ FE++LAE ++ L +D+L+
Sbjct: 1 MSRPQEPHRPFLPFGNPFKFILPKGSYLSPKLLALLNAFEESLAERVKSLKPGGKEDILT 60
Query: 1154 LSWMRVAMDTLCTIHDSLKTLITDLKFPSSDWDNKWINMYLEDSVKLLDVCIALISEVSR 975
LSWM A+ TLC IH +KTLIT+L+ P DWD KWI++YL++SVKLLD+CIA S++SR
Sbjct: 61 LSWMTQAISTLCAIHTDVKTLITELELPVCDWDEKWIDVYLDNSVKLLDICIAFSSDISR 120
Query: 974 LDQCQLFLRYSLHLLDPANNYPPEKAKKAHTCLQDWMQKIKSRSPKLENCPATLQVLERS 795
L+Q L+L+ LH LD +N + KA + W Q I S++P+LENC A L L S
Sbjct: 121 LNQGHLYLQCGLHNLDGTSN----QFMKARSSFDGWKQHINSKNPRLENCFAILDSLTES 176
Query: 794 LYLGKVKDSAKGEILGRALYGLKVVTVFICSLLVAAFSGHSKPLLLNLDVPRKFTWSVAF 615
L L K+K+SAKG++L RA+YG++VVTVFI S+ FSG +K L +L + W+ AF
Sbjct: 177 LNLPKIKNSAKGKVLMRAMYGVRVVTVFILSMFAVTFSGSTKE-LKDLQIHETCLWTEAF 235
Query: 614 TDLQAYVNNEILNLFPSGKVASPREVEAVRIAVEKF--TISNHVDCNEEALAPVRNSTQE 441
D++ +++ EI ++ SG++ + +E+E V +V+K I + VD N E
Sbjct: 236 VDVRDFISQEIRRIYSSGRITALKELEVVDTSVKKLYPLIQDGVDPN------------E 283
Query: 440 EEGLQVTVSKLIKSAEELDRGLDLLSKQVNTFFKIVLTGRDALLNTLR 297
E L + S L + AE+L GLDLL+K+ + FF I+LTGRD+LL LR
Sbjct: 284 AEQLHLLTSNLTEKAEKLSGGLDLLAKEADRFFHILLTGRDSLLCNLR 331