BLASTX nr result

ID: Dioscorea21_contig00002870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002870
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282901.1| PREDICTED: sec-independent protein transloca...    92   4e-17
emb|CAN69811.1| hypothetical protein VITISV_043107 [Vitis vinifera]    92   4e-17
ref|XP_002468243.1| hypothetical protein SORBIDRAFT_01g042360 [S...    91   1e-16
ref|XP_002532235.1| Sec-independent protein translocase protein ...    90   2e-16
ref|XP_002315904.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16

>ref|XP_002282901.1| PREDICTED: sec-independent protein translocase protein TatC [Vitis
           vinifera] gi|297737744|emb|CBI26945.3| unnamed protein
           product [Vitis vinifera]
          Length = 352

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 47/64 (73%), Positives = 52/64 (81%)
 Frame = -3

Query: 528 LLLGQVGLVSGDQMLSIWRYXXXXXXXXXXVLTPSTDPLTQILLAGPLVFLYFGGAFMVK 349
           LLLGQVG+VSGDQMLSIWRY          VLTPSTDPLTQ+LLAGPL+ LY GGA+MVK
Sbjct: 289 LLLGQVGVVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVK 348

Query: 348 LIGR 337
           L+GR
Sbjct: 349 LMGR 352


>emb|CAN69811.1| hypothetical protein VITISV_043107 [Vitis vinifera]
          Length = 352

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 47/64 (73%), Positives = 52/64 (81%)
 Frame = -3

Query: 528 LLLGQVGLVSGDQMLSIWRYXXXXXXXXXXVLTPSTDPLTQILLAGPLVFLYFGGAFMVK 349
           LLLGQVG+VSGDQMLSIWRY          VLTPSTDPLTQ+LLAGPL+ LY GGA+MVK
Sbjct: 289 LLLGQVGVVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVK 348

Query: 348 LIGR 337
           L+GR
Sbjct: 349 LMGR 352


>ref|XP_002468243.1| hypothetical protein SORBIDRAFT_01g042360 [Sorghum bicolor]
           gi|241922097|gb|EER95241.1| hypothetical protein
           SORBIDRAFT_01g042360 [Sorghum bicolor]
          Length = 352

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/64 (73%), Positives = 51/64 (79%)
 Frame = -3

Query: 528 LLLGQVGLVSGDQMLSIWRYXXXXXXXXXXVLTPSTDPLTQILLAGPLVFLYFGGAFMVK 349
           LLLGQ+GLVS DQMLSIWRY          VLTPSTDPLTQ+LLAGPL+ LY GGA+MVK
Sbjct: 289 LLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVK 348

Query: 348 LIGR 337
           LIGR
Sbjct: 349 LIGR 352


>ref|XP_002532235.1| Sec-independent protein translocase protein tatC, putative [Ricinus
           communis] gi|223528092|gb|EEF30166.1| Sec-independent
           protein translocase protein tatC, putative [Ricinus
           communis]
          Length = 340

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/64 (71%), Positives = 51/64 (79%)
 Frame = -3

Query: 528 LLLGQVGLVSGDQMLSIWRYXXXXXXXXXXVLTPSTDPLTQILLAGPLVFLYFGGAFMVK 349
           +LLGQVGLVSGDQMLSIWRY          VLTPSTDPLTQ+LLAGPL+ LY GGA++VK
Sbjct: 277 VLLGQVGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWVVK 336

Query: 348 LIGR 337
           L GR
Sbjct: 337 LTGR 340


>ref|XP_002315904.1| predicted protein [Populus trichocarpa] gi|222864944|gb|EEF02075.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/64 (71%), Positives = 51/64 (79%)
 Frame = -3

Query: 528 LLLGQVGLVSGDQMLSIWRYXXXXXXXXXXVLTPSTDPLTQILLAGPLVFLYFGGAFMVK 349
           +LLGQVGLVSGDQMLSIWRY          VLTPSTDPLTQ+LLAGPL+ LY GGA++VK
Sbjct: 215 ILLGQVGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQLLLAGPLLGLYLGGAWVVK 274

Query: 348 LIGR 337
           L GR
Sbjct: 275 LTGR 278


Top