BLASTX nr result

ID: Dioscorea21_contig00002862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002862
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275216.1| PREDICTED: translocon-associated protein sub...   295   1e-77
ref|NP_001058585.1| Os06g0715500 [Oryza sativa Japonica Group] g...   294   4e-77
gb|EAZ02360.1| hypothetical protein OsI_24464 [Oryza sativa Indi...   294   4e-77
ref|XP_002529245.1| translocon-associated protein, alpha subunit...   293   5e-77
ref|XP_002305486.1| predicted protein [Populus trichocarpa] gi|1...   291   2e-76

>ref|XP_002275216.1| PREDICTED: translocon-associated protein subunit alpha [Vitis
           vinifera] gi|147821778|emb|CAN77171.1| hypothetical
           protein VITISV_029842 [Vitis vinifera]
           gi|297744658|emb|CBI37920.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  295 bits (756), Expect = 1e-77
 Identities = 153/247 (61%), Positives = 178/247 (72%)
 Frame = +3

Query: 201 MEIRVFASLIFAFLLIASPSVKFVRCQXXXXXXXXXXXXXXXXXIVXXXXXXXXXXXXXA 380
           M IRVF     AFLL+ SP ++  RCQ                 IV              
Sbjct: 1   MAIRVF---FLAFLLLCSPFLQVARCQSEVEVSEAAEEGGDLG-IVGEDAQDFGDGSFSP 56

Query: 381 APGVGTICVFPKNTARLVAAGEETELLVGMHNEGEXXXXXXXXKASVHYPFDHHMLVQNL 560
           APGV T+CVFPKN+ARLV AGEE ELLVGM N+GE        KASVH PF+H +LVQNL
Sbjct: 57  APGVDTVCVFPKNSARLVTAGEEAELLVGMKNDGESSLNVIAVKASVHLPFNHQLLVQNL 116

Query: 561 TSQSFYNASVPVSAQATFPYIFAVSKYLQPGSFDLVGTILYEIDQQPYQSTFYNGTIEVV 740
           ++Q F NASVP SAQATFPYIFAVSKYLQPG+FDLVGTI+YEIDQ PYQS FYNGTIEVV
Sbjct: 117 STQGFNNASVPASAQATFPYIFAVSKYLQPGTFDLVGTIVYEIDQHPYQSVFYNGTIEVV 176

Query: 741 DAGSFLSVESVFLITLGLALIGLFGLWAYSQVQHFSKKTKKAPKVEVGTGITDANMDEWL 920
           +AG F+S+ESVFL+ LG+AL+  FG+W   Q+Q+ SKKTK+APKVEVGTG TDA++DEWL
Sbjct: 177 EAGGFVSIESVFLVFLGIALLVFFGVWIRGQIQNLSKKTKRAPKVEVGTGTTDASLDEWL 236

Query: 921 QGTAYSQ 941
           QGTAY+Q
Sbjct: 237 QGTAYTQ 243


>ref|NP_001058585.1| Os06g0715500 [Oryza sativa Japonica Group]
           gi|53791783|dbj|BAD53577.1| putative SSR alpha subunit
           [Oryza sativa Japonica Group]
           gi|113596625|dbj|BAF20499.1| Os06g0715500 [Oryza sativa
           Japonica Group] gi|125598503|gb|EAZ38283.1| hypothetical
           protein OsJ_22661 [Oryza sativa Japonica Group]
           gi|215704734|dbj|BAG94762.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765401|dbj|BAG87098.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765644|dbj|BAG87341.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 257

 Score =  294 bits (752), Expect = 4e-77
 Identities = 147/241 (60%), Positives = 174/241 (72%)
 Frame = +3

Query: 219 ASLIFAFLLIASPSVKFVRCQXXXXXXXXXXXXXXXXXIVXXXXXXXXXXXXXAAPGVGT 398
           ++L+ AFLL A+P V+  R Q                 IV              APGV T
Sbjct: 9   SALLLAFLLAAAPVVQVARAQSMEEAATAEVVDGADLGIVSDDTQVSSDGPLSPAPGVET 68

Query: 399 ICVFPKNTARLVAAGEETELLVGMHNEGEXXXXXXXXKASVHYPFDHHMLVQNLTSQSFY 578
           +CVFPKN  ++V AGEETELLVG+ NEGE         +++H PFDH M  QNLT Q+F+
Sbjct: 69  VCVFPKNAGKIVLAGEETELLVGLQNEGESTLNVVAIHSTLHLPFDHKMYGQNLTVQNFF 128

Query: 579 NASVPVSAQATFPYIFAVSKYLQPGSFDLVGTILYEIDQQPYQSTFYNGTIEVVDAGSFL 758
           NASVPVS QATFPY FAVSK+LQPG++DLVG I+YEIDQ PYQ+ FYNGT+EVV+AG  L
Sbjct: 129 NASVPVSVQATFPYTFAVSKFLQPGAYDLVGYIVYEIDQNPYQNVFYNGTVEVVEAGGLL 188

Query: 759 SVESVFLITLGLALIGLFGLWAYSQVQHFSKKTKKAPKVEVGTGITDANMDEWLQGTAYS 938
           SVESVFLITLG+AL+GLFGLWAY QVQ  SKKTKKAPKVE+GTG TDANMDEWL+GTA++
Sbjct: 189 SVESVFLITLGVALLGLFGLWAYGQVQQLSKKTKKAPKVELGTGTTDANMDEWLEGTAFA 248

Query: 939 Q 941
           Q
Sbjct: 249 Q 249


>gb|EAZ02360.1| hypothetical protein OsI_24464 [Oryza sativa Indica Group]
          Length = 257

 Score =  294 bits (752), Expect = 4e-77
 Identities = 147/241 (60%), Positives = 174/241 (72%)
 Frame = +3

Query: 219 ASLIFAFLLIASPSVKFVRCQXXXXXXXXXXXXXXXXXIVXXXXXXXXXXXXXAAPGVGT 398
           ++L+ AFLL A+P V+  R Q                 IV              APGV T
Sbjct: 9   SALLLAFLLAAAPVVQVARAQSEEEAATAEVVDGADLGIVSDDTQVSSDGPLSPAPGVET 68

Query: 399 ICVFPKNTARLVAAGEETELLVGMHNEGEXXXXXXXXKASVHYPFDHHMLVQNLTSQSFY 578
           +CVFPKN  ++V AGEETELLVG+ NEGE         +++H PFDH M  QNLT Q+F+
Sbjct: 69  VCVFPKNAGKIVLAGEETELLVGLQNEGESTLNVVAIHSTLHLPFDHKMYGQNLTVQNFF 128

Query: 579 NASVPVSAQATFPYIFAVSKYLQPGSFDLVGTILYEIDQQPYQSTFYNGTIEVVDAGSFL 758
           NASVPVS QATFPY FAVSK+LQPG++DLVG I+YEIDQ PYQ+ FYNGT+EVV+AG  L
Sbjct: 129 NASVPVSVQATFPYTFAVSKFLQPGAYDLVGYIVYEIDQNPYQNVFYNGTVEVVEAGGLL 188

Query: 759 SVESVFLITLGLALIGLFGLWAYSQVQHFSKKTKKAPKVEVGTGITDANMDEWLQGTAYS 938
           SVESVFLITLG+AL+GLFGLWAY QVQ  SKKTKKAPKVE+GTG TDANMDEWL+GTA++
Sbjct: 189 SVESVFLITLGVALLGLFGLWAYGQVQQLSKKTKKAPKVELGTGTTDANMDEWLEGTAFA 248

Query: 939 Q 941
           Q
Sbjct: 249 Q 249


>ref|XP_002529245.1| translocon-associated protein, alpha subunit, putative [Ricinus
           communis] gi|223531281|gb|EEF33123.1|
           translocon-associated protein, alpha subunit, putative
           [Ricinus communis]
          Length = 260

 Score =  293 bits (751), Expect = 5e-77
 Identities = 149/247 (60%), Positives = 180/247 (72%), Gaps = 2/247 (0%)
 Frame = +3

Query: 207 IRVFASLIFAFLLIASPSVKFVRCQ--XXXXXXXXXXXXXXXXXIVXXXXXXXXXXXXXA 380
           +RVF    FA LL+ASP ++  +CQ                   +               
Sbjct: 7   LRVF---FFALLLLASPLLQVAKCQSDSEAEIAGSGEEVSDLGIVGEDAHDDFGDGSFSP 63

Query: 381 APGVGTICVFPKNTARLVAAGEETELLVGMHNEGEXXXXXXXXKASVHYPFDHHMLVQNL 560
           APGV T+CVFPKN+AR+V AGEETE+LVG+ N+G+        KASVH PFDH +LVQNL
Sbjct: 64  APGVNTVCVFPKNSARVVPAGEETEVLVGVKNDGDSSINVIAVKASVHLPFDHRLLVQNL 123

Query: 561 TSQSFYNASVPVSAQATFPYIFAVSKYLQPGSFDLVGTILYEIDQQPYQSTFYNGTIEVV 740
           T+Q+F NA+VP SAQATFPYIFAVSKYLQPGSFDLVGTI+YEIDQ PYQSTFYNGTIEVV
Sbjct: 124 TAQAFNNATVPASAQATFPYIFAVSKYLQPGSFDLVGTIIYEIDQHPYQSTFYNGTIEVV 183

Query: 741 DAGSFLSVESVFLITLGLALIGLFGLWAYSQVQHFSKKTKKAPKVEVGTGITDANMDEWL 920
           ++G FLS+ESVFL+TLG+AL+ L GLW + Q+Q+ SKKTK+APKVEVGTG  D ++DEWL
Sbjct: 184 ESGGFLSIESVFLVTLGIALLVLLGLWIHGQIQNLSKKTKRAPKVEVGTGTRDVSLDEWL 243

Query: 921 QGTAYSQ 941
           QGTAY+Q
Sbjct: 244 QGTAYTQ 250


>ref|XP_002305486.1| predicted protein [Populus trichocarpa] gi|118486855|gb|ABK95262.1|
           unknown [Populus trichocarpa]
           gi|222848450|gb|EEE85997.1| predicted protein [Populus
           trichocarpa]
          Length = 256

 Score =  291 bits (746), Expect = 2e-76
 Identities = 153/246 (62%), Positives = 178/246 (72%), Gaps = 1/246 (0%)
 Frame = +3

Query: 207 IRVFASLIFAFLLIASPSVKFVRCQXXXXXXXXXXXXXXXXX-IVXXXXXXXXXXXXXAA 383
           +RVF    FA LL+ASP ++   CQ                  IV              A
Sbjct: 4   LRVF---FFALLLLASPLLQVATCQSDSDAEVAETAEEVSDLGIVGEDAQDFGDANFSPA 60

Query: 384 PGVGTICVFPKNTARLVAAGEETELLVGMHNEGEXXXXXXXXKASVHYPFDHHMLVQNLT 563
           PGV T+CVFPKN+ARLV AGEETELLVGM N+GE        +ASVH PFDH +LVQNL+
Sbjct: 61  PGVETVCVFPKNSARLVTAGEETELLVGMKNDGELPITIIAIRASVHLPFDHKLLVQNLS 120

Query: 564 SQSFYNASVPVSAQATFPYIFAVSKYLQPGSFDLVGTILYEIDQQPYQSTFYNGTIEVVD 743
           +Q F NA+VP SAQATFPYIF VSKYLQPGSFDLVGTI+YEIDQ PYQSTF+NGTIEVVD
Sbjct: 121 AQGFNNATVPASAQATFPYIFGVSKYLQPGSFDLVGTIVYEIDQHPYQSTFHNGTIEVVD 180

Query: 744 AGSFLSVESVFLITLGLALIGLFGLWAYSQVQHFSKKTKKAPKVEVGTGITDANMDEWLQ 923
           +G FLS+ESVFLITLG+AL+ LFGLW   Q+Q+ SKKTK+APKVEVGTG  DA+MDEWL+
Sbjct: 181 SGVFLSMESVFLITLGIALLVLFGLWVNGQIQNLSKKTKRAPKVEVGTGTRDASMDEWLE 240

Query: 924 GTAYSQ 941
           GTA ++
Sbjct: 241 GTALAK 246


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