BLASTX nr result

ID: Dioscorea21_contig00002848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002848
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513843.1| eukaryotic translation initiation factor, pu...   183   3e-44
ref|XP_002302989.1| predicted protein [Populus trichocarpa] gi|2...   176   4e-42
ref|XP_002285825.1| PREDICTED: eukaryotic translation initiation...   176   6e-42
ref|XP_002333033.1| predicted protein [Populus trichocarpa] gi|2...   175   1e-41
emb|CBI19089.3| unnamed protein product [Vitis vinifera]              174   1e-41

>ref|XP_002513843.1| eukaryotic translation initiation factor, putative [Ricinus
           communis] gi|223546929|gb|EEF48426.1| eukaryotic
           translation initiation factor, putative [Ricinus
           communis]
          Length = 447

 Score =  183 bits (465), Expect = 3e-44
 Identities = 96/167 (57%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
 Frame = +3

Query: 18  EKEHPSNGNAESKVSEADNSVQAN-NYDNLLAEIKGNLKKGSSPSQLKTALSSLPGSPVE 194
           EK   +  + E +V   +N  ++N + + L+ EIK +LKKGSSPSQLK+ LSSL G+  E
Sbjct: 272 EKAKSAKKSPEREVKVHENGSKSNGSQEGLVHEIKAHLKKGSSPSQLKSYLSSLSGTSQE 331

Query: 195 VMNALFEALFDGAGKGFAKEVTKKKNYLTAFVQDEESQMLLLGAVETFCQKASADAVKEV 374
           VMNALF ALF+G  KGF+KEVTK+K YL A  Q+E SQ++LL A+E+F  K S +A KEV
Sbjct: 332 VMNALFAALFEGVEKGFSKEVTKRKKYLAAATQEEGSQIVLLHAIESFFAKLSPEATKEV 391

Query: 375 ALALKVLYDIDALEEDSIIQWYEAGLGGDNKNLPVWKNVKPFVEWLQ 515
           +L LKVLYD D LEED I+ WY+ GL G NKN  VWK VKPFVEWL+
Sbjct: 392 SLVLKVLYDNDVLEEDFILAWYQKGLSGSNKNSAVWKYVKPFVEWLE 438


>ref|XP_002302989.1| predicted protein [Populus trichocarpa] gi|222844715|gb|EEE82262.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score =  176 bits (446), Expect = 4e-42
 Identities = 91/171 (53%), Positives = 117/171 (68%), Gaps = 1/171 (0%)
 Frame = +3

Query: 6   PPKAEKEHPSNGNAESKVSEADNSVQANNYDNLLAEIKGNLKKGSSPSQLKTALSSLPGS 185
           P + EK  P NG++ +             ++ L+ EIK NLKKG S SQL++ LSSL GS
Sbjct: 289 PAREEKPKPDNGSSST-------------HETLVIEIKENLKKGVSASQLRSTLSSLNGS 335

Query: 186 PVEVMNALFEALFDGAGKGFAKEVTKKKNYLTAFV-QDEESQMLLLGAVETFCQKASADA 362
             E ++ALFEALF+G  KGF KEV KKKNYL A V QDE SQ+LLL A+E FC K+S+ A
Sbjct: 336 AQEKIDALFEALFEGVAKGFVKEVDKKKNYLAAAVAQDERSQLLLLRAIEAFCIKSSSSA 395

Query: 363 VKEVALALKVLYDIDALEEDSIIQWYEAGLGGDNKNLPVWKNVKPFVEWLQ 515
           ++EV L LK LYD D LEE+ I+ WY+ GL   NK+  +WKNV+PF++WLQ
Sbjct: 396 LREVGLVLKALYDADVLEEECIVHWYQEGLARGNKDSQIWKNVEPFIKWLQ 446


>ref|XP_002285825.1| PREDICTED: eukaryotic translation initiation factor 5-like [Vitis
           vinifera]
          Length = 450

 Score =  176 bits (445), Expect = 6e-42
 Identities = 90/169 (53%), Positives = 119/169 (70%), Gaps = 1/169 (0%)
 Frame = +3

Query: 12  KAEKEHPSNGNAESKVSEADNSVQA-NNYDNLLAEIKGNLKKGSSPSQLKTALSSLPGSP 188
           K+ K+ P +   +S++  A N  ++ NN + L+ EIK  LKKG S  +LK  L SL G+ 
Sbjct: 274 KSTKKSPKH-EEKSELKGAQNGTKSGNNQERLVDEIKEYLKKGPSAVKLKNFLGSLSGTS 332

Query: 189 VEVMNALFEALFDGAGKGFAKEVTKKKNYLTAFVQDEESQMLLLGAVETFCQKASADAVK 368
            E+++ALFEALF G GKG AKEV KKK YL A  Q++ SQ +LL A+E+FC K++ +AVK
Sbjct: 333 QEIIDALFEALFMGIGKGLAKEVAKKKTYLAAVTQEDRSQSILLRAIESFCGKSNPEAVK 392

Query: 369 EVALALKVLYDIDALEEDSIIQWYEAGLGGDNKNLPVWKNVKPFVEWLQ 515
           EV L LK LYD D LEE+ I++WY+ GL G NKN  +WKNVKPF+EWLQ
Sbjct: 393 EVGLVLKALYDNDLLEEEFILEWYKQGLAGGNKNSKIWKNVKPFIEWLQ 441


>ref|XP_002333033.1| predicted protein [Populus trichocarpa] gi|222834469|gb|EEE72946.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score =  175 bits (443), Expect = 1e-41
 Identities = 91/171 (53%), Positives = 117/171 (68%), Gaps = 1/171 (0%)
 Frame = +3

Query: 6   PPKAEKEHPSNGNAESKVSEADNSVQANNYDNLLAEIKGNLKKGSSPSQLKTALSSLPGS 185
           P + EK  P NG++ +             ++ L+ EIK NLKKG S SQL++ LSSL GS
Sbjct: 289 PAREEKPKPDNGSSST-------------HETLVIEIKENLKKGVSASQLRSTLSSLNGS 335

Query: 186 PVEVMNALFEALFDGAGKGFAKEVTKKKNYLTAFV-QDEESQMLLLGAVETFCQKASADA 362
             E ++ALFEALF+G  KGF KEV KKKNYL A V QDE SQ+LLL A+E FC K+S+ A
Sbjct: 336 AQEKIDALFEALFEGVVKGFVKEVDKKKNYLAAAVAQDERSQLLLLRAIEAFCIKSSSSA 395

Query: 363 VKEVALALKVLYDIDALEEDSIIQWYEAGLGGDNKNLPVWKNVKPFVEWLQ 515
           ++EV L LK LYD D LEE+ I+ WY+ GL   NK+  +WKNV+PF++WLQ
Sbjct: 396 LREVGLVLKALYDADVLEEECIVHWYQEGLARGNKDSQIWKNVEPFIKWLQ 446


>emb|CBI19089.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  174 bits (442), Expect = 1e-41
 Identities = 91/171 (53%), Positives = 117/171 (68%), Gaps = 6/171 (3%)
 Frame = +3

Query: 21  KEHPSNGNAESKVSE-----ADNSVQA-NNYDNLLAEIKGNLKKGSSPSQLKTALSSLPG 182
           K  PS   A+ ++ E     A N  ++ NN + L+ EIK  LKKG S  +LK  L SL G
Sbjct: 83  KTDPSVEAAQQRIKEQLSAGAQNGTKSGNNQERLVDEIKEYLKKGPSAVKLKNFLGSLSG 142

Query: 183 SPVEVMNALFEALFDGAGKGFAKEVTKKKNYLTAFVQDEESQMLLLGAVETFCQKASADA 362
           +  E+++ALFEALF G GKG AKEV KKK YL A  Q++ SQ +LL A+E+FC K++ +A
Sbjct: 143 TSQEIIDALFEALFMGIGKGLAKEVAKKKTYLAAVTQEDRSQSILLRAIESFCGKSNPEA 202

Query: 363 VKEVALALKVLYDIDALEEDSIIQWYEAGLGGDNKNLPVWKNVKPFVEWLQ 515
           VKEV L LK LYD D LEE+ I++WY+ GL G NKN  +WKNVKPF+EWLQ
Sbjct: 203 VKEVGLVLKALYDNDLLEEEFILEWYKQGLAGGNKNSKIWKNVKPFIEWLQ 253


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