BLASTX nr result

ID: Dioscorea21_contig00002834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002834
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   205   1e-62
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              205   1e-62
ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...   202   1e-60
ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6...   191   7e-59
ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chl...   191   7e-59

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  205 bits (522), Expect(2) = 1e-62
 Identities = 103/136 (75%), Positives = 120/136 (88%)
 Frame = +3

Query: 144 QILLVDKKIADPKAMFKVLDGAVKEKYPLLVIAEGVEQEVLALMIRNKLKGVFKVAAIKA 323
           ++LLVDKKI +PK MFK+LD AVKEKYP++++AEG+EQE LA +IRNKL+GV K AAIKA
Sbjct: 245 KLLLVDKKITNPKEMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKA 304

Query: 324 PSFGEGKSHFLDDLAILTGGKVVRDEMGLTLEKAGKEVLGSAAKVVITNNSTLIVTDGST 503
           P+FGE KSH+LDDLAILTGG V+ DEMGLTLEKAGKEVLG+A KVVIT +STLIVTDGST
Sbjct: 305 PAFGERKSHYLDDLAILTGGTVISDEMGLTLEKAGKEVLGTATKVVITKDSTLIVTDGST 364

Query: 504 KHAVEKRVHQIRSLAE 551
           + AVEKRV QIR L E
Sbjct: 365 QPAVEKRVSQIRGLVE 380



 Score = 59.7 bits (143), Expect(2) = 1e-62
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = +2

Query: 8   DSSLEILEGMQLDRGYLSPYFVTDSANMFAEFIDCKLI 121
           ++SL+I+EGMQ DRGYLSPYFVTD   M  EF DCKL+
Sbjct: 210 ENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLL 247


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  205 bits (522), Expect(2) = 1e-62
 Identities = 103/136 (75%), Positives = 120/136 (88%)
 Frame = +3

Query: 144 QILLVDKKIADPKAMFKVLDGAVKEKYPLLVIAEGVEQEVLALMIRNKLKGVFKVAAIKA 323
           ++LLVDKKI +PK MFK+LD AVKEKYP++++AEG+EQE LA +IRNKL+GV K AAIKA
Sbjct: 219 KLLLVDKKITNPKEMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKA 278

Query: 324 PSFGEGKSHFLDDLAILTGGKVVRDEMGLTLEKAGKEVLGSAAKVVITNNSTLIVTDGST 503
           P+FGE KSH+LDDLAILTGG V+ DEMGLTLEKAGKEVLG+A KVVIT +STLIVTDGST
Sbjct: 279 PAFGERKSHYLDDLAILTGGTVISDEMGLTLEKAGKEVLGTATKVVITKDSTLIVTDGST 338

Query: 504 KHAVEKRVHQIRSLAE 551
           + AVEKRV QIR L E
Sbjct: 339 QPAVEKRVSQIRGLVE 354



 Score = 59.7 bits (143), Expect(2) = 1e-62
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = +2

Query: 8   DSSLEILEGMQLDRGYLSPYFVTDSANMFAEFIDCKLI 121
           ++SL+I+EGMQ DRGYLSPYFVTD   M  EF DCKL+
Sbjct: 184 ENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLL 221


>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score =  202 bits (513), Expect(2) = 1e-60
 Identities = 101/136 (74%), Positives = 118/136 (86%)
 Frame = +3

Query: 144 QILLVDKKIADPKAMFKVLDGAVKEKYPLLVIAEGVEQEVLALMIRNKLKGVFKVAAIKA 323
           ++LLVDKKI +PK MFK+LD AVKEKYP++V+AEG+EQE LA +IRNKL+G  K AAIKA
Sbjct: 254 KLLLVDKKITNPKEMFKILDNAVKEKYPIVVVAEGIEQEALAPVIRNKLRGALKAAAIKA 313

Query: 324 PSFGEGKSHFLDDLAILTGGKVVRDEMGLTLEKAGKEVLGSAAKVVITNNSTLIVTDGST 503
           P+FGE K H+LDD+AILTG  V+RDEMGLTLEK GKEVLGSA KVVIT +STLIVTDGST
Sbjct: 314 PAFGERKGHYLDDIAILTGATVIRDEMGLTLEKVGKEVLGSATKVVITKDSTLIVTDGST 373

Query: 504 KHAVEKRVHQIRSLAE 551
           + AV+KRV QIR LAE
Sbjct: 374 QAAVQKRVSQIRGLAE 389



 Score = 56.6 bits (135), Expect(2) = 1e-60
 Identities = 24/39 (61%), Positives = 32/39 (82%)
 Frame = +2

Query: 5   LDSSLEILEGMQLDRGYLSPYFVTDSANMFAEFIDCKLI 121
           +D++L+I++GMQ DRGYLSPYFVTD   M  EF +CKL+
Sbjct: 218 IDNNLQIVKGMQFDRGYLSPYFVTDRRKMTVEFHNCKLL 256


>ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4,
           chloroplastic-like [Cucumis sativus]
          Length = 597

 Score =  191 bits (486), Expect(2) = 7e-59
 Identities = 95/136 (69%), Positives = 117/136 (86%)
 Frame = +3

Query: 144 QILLVDKKIADPKAMFKVLDGAVKEKYPLLVIAEGVEQEVLALMIRNKLKGVFKVAAIKA 323
           ++LLVDKKI+DPK MFK+LD AVKEKYP++++AEG+E E LA +IRNKL+GV K AAIKA
Sbjct: 266 KLLLVDKKISDPKEMFKILDNAVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKA 325

Query: 324 PSFGEGKSHFLDDLAILTGGKVVRDEMGLTLEKAGKEVLGSAAKVVITNNSTLIVTDGST 503
           P+FGE KSH+LDD+A LTG  VVR++ GLTLEK GKEVLGSA KVVI+ +STLIVTDG+T
Sbjct: 326 PAFGERKSHYLDDIATLTGATVVREDNGLTLEKTGKEVLGSACKVVISKDSTLIVTDGNT 385

Query: 504 KHAVEKRVHQIRSLAE 551
           + AV+KRV QI+ L E
Sbjct: 386 REAVQKRVLQIQKLME 401



 Score = 61.2 bits (147), Expect(2) = 7e-59
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +2

Query: 2   SLDSSLEILEGMQLDRGYLSPYFVTDSANMFAEFIDCKLI 121
           S+D+SL+I+EGMQ DRGYLSPYFVTD   M  EF +CKL+
Sbjct: 229 SVDNSLQIVEGMQFDRGYLSPYFVTDRRKMVVEFHECKLL 268


>ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like
           [Cucumis sativus]
          Length = 597

 Score =  191 bits (486), Expect(2) = 7e-59
 Identities = 95/136 (69%), Positives = 117/136 (86%)
 Frame = +3

Query: 144 QILLVDKKIADPKAMFKVLDGAVKEKYPLLVIAEGVEQEVLALMIRNKLKGVFKVAAIKA 323
           ++LLVDKKI+DPK MFK+LD AVKEKYP++++AEG+E E LA +IRNKL+GV K AAIKA
Sbjct: 266 KLLLVDKKISDPKEMFKILDNAVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKA 325

Query: 324 PSFGEGKSHFLDDLAILTGGKVVRDEMGLTLEKAGKEVLGSAAKVVITNNSTLIVTDGST 503
           P+FGE KSH+LDD+A LTG  VVR++ GLTLEK GKEVLGSA KVVI+ +STLIVTDG+T
Sbjct: 326 PAFGERKSHYLDDIATLTGATVVREDNGLTLEKTGKEVLGSACKVVISKDSTLIVTDGNT 385

Query: 504 KHAVEKRVHQIRSLAE 551
           + AV+KRV QI+ L E
Sbjct: 386 REAVQKRVLQIQKLME 401



 Score = 61.2 bits (147), Expect(2) = 7e-59
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +2

Query: 2   SLDSSLEILEGMQLDRGYLSPYFVTDSANMFAEFIDCKLI 121
           S+D+SL+I+EGMQ DRGYLSPYFVTD   M  EF +CKL+
Sbjct: 229 SVDNSLQIVEGMQFDRGYLSPYFVTDRRKMVVEFHECKLL 268


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