BLASTX nr result

ID: Dioscorea21_contig00002811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002811
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457669.1| hypothetical protein SORBIDRAFT_03g011390 [S...   479   e-133
ref|XP_003567334.1| PREDICTED: ERI1 exoribonuclease 2-like [Brac...   471   e-130
gb|ACG36494.1| histone mRNA exonuclease 1 [Zea mays]                  467   e-129
tpg|DAA54203.1| TPA: histone mRNA exonuclease 1 [Zea mays]            464   e-128
tpg|DAA54202.1| TPA: hypothetical protein ZEAMMB73_728544 [Zea m...   464   e-128

>ref|XP_002457669.1| hypothetical protein SORBIDRAFT_03g011390 [Sorghum bicolor]
            gi|241929644|gb|EES02789.1| hypothetical protein
            SORBIDRAFT_03g011390 [Sorghum bicolor]
          Length = 424

 Score =  479 bits (1233), Expect = e-133
 Identities = 233/347 (67%), Positives = 258/347 (74%), Gaps = 1/347 (0%)
 Frame = -3

Query: 1345 IYPDIHKLQQSQMNIFENHIYPTNRDYFLPVENRIHYLPYKMFSQGHQHQLQFQDFQYFV 1166
            I+ D   ++Q     F+N  Y  NRD+  P+ENR+ YLP+KM  QGH H  Q Q+FQYFV
Sbjct: 82   IHSDYQMVRQPLPYGFDNQFYQINRDHGFPIENRVQYLPFKMLPQGHPHDAQLQEFQYFV 141

Query: 1165 VIDFEATCDKERKPHPQEIIEFPSVLVNSVTGQLEASFQTYVRPVYHQLLTDFCKELTGI 986
            VIDFEATCDK   P PQEIIEFPSVLVNS TG+LE  FQTYVRP YHQ LTDFCKELTGI
Sbjct: 142  VIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCKELTGI 201

Query: 985  QQIQVDRGVSLSEALLMHDKWLEDKGIKHKSFAVVTWGNWDCRTMLESECKFKRIRKPPY 806
            QQIQVDRGV L EALLMHDKWLEDKGIK+ +FA+VTW NWDCRTMLESEC+FKRIRKPPY
Sbjct: 202  QQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRTMLESECRFKRIRKPPY 261

Query: 805  FNRWINLKALFQEMVSGARCNLMEAVQRAGLTWEGRPHCGLDDARNTARLLALLMHWGFK 626
            FNRWINLK  FQE+    RCNL EAVQ AGLTWEGR HCGLDDARNTARLLAL+MH GFK
Sbjct: 262  FNRWINLKVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALMMHRGFK 321

Query: 625  FSITNELPPSP-PTDHPMAYSPFXXXXXXXXXXXXXQKLKELPGPITQFHPFMDPTGKER 449
            FSITN L   P P       SP              QK KE+ G   Q +P+    GK+R
Sbjct: 322  FSITNSLVWQPAPQSTTCQLSP----DRSPDPVQQQQKPKEMLGSPVQVNPYATSAGKDR 377

Query: 448  FTYCFCGVISSKCVIRKPGPMQGRCFFGCGNWTASRRAVCNYFVWAS 308
              YC+CGV+S   V+RKPGPMQGR FFGCGNWTA+RRA+C YF WAS
Sbjct: 378  AMYCYCGVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFAWAS 424


>ref|XP_003567334.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
          Length = 425

 Score =  471 bits (1213), Expect = e-130
 Identities = 236/349 (67%), Positives = 260/349 (74%), Gaps = 2/349 (0%)
 Frame = -3

Query: 1348 NIYPDIHKLQQSQMNIFENHIYPTNRDYFLPVENRIHYLPYKMFSQGHQHQLQFQDFQYF 1169
            +I+ +    +Q Q   F+N  Y  NRD+   VE R+ + P KM  QG+ H  Q Q+FQYF
Sbjct: 81   HIHSEYQMPRQPQPYGFDNQFYQINRDHNFSVEKRVQF-PLKMLPQGYPHDAQLQEFQYF 139

Query: 1168 VVIDFEATCDKERKPHPQEIIEFPSVLVNSVTGQLEASFQTYVRPVYHQLLTDFCKELTG 989
            VVIDFEATCDKE  PHPQEIIEFPSVLVNS TGQLEASFQTYVRP YHQ LTDFCKELTG
Sbjct: 140  VVIDFEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQTYVRPAYHQNLTDFCKELTG 199

Query: 988  IQQIQVDRGVSLSEALLMHDKWLEDKGIKHKSFAVVTWGNWDCRTMLESECKFKRIRKPP 809
            IQQIQVDRGV LSEALLMHDKWLEDKGIKHK+FAVVTW NWDCR MLESEC+FK IRKPP
Sbjct: 200  IQQIQVDRGVPLSEALLMHDKWLEDKGIKHKNFAVVTWSNWDCRVMLESECRFKSIRKPP 259

Query: 808  YFNRWINLKALFQEMVSGARCNLMEAVQRAGLTWEGRPHCGLDDARNTARLLALLMHWGF 629
            YFNRWINLK  FQEM  G RCNL +AVQ AGLTWEGR HCGLDDARNTARLLALLMH GF
Sbjct: 260  YFNRWINLKVPFQEMYGGVRCNLKDAVQLAGLTWEGRAHCGLDDARNTARLLALLMHRGF 319

Query: 628  KFSITNELPPSPPTDHPMAYSPFXXXXXXXXXXXXXQKLKE-LPGPITQFHPFMDPT-GK 455
            KFSITN L   P    P   +               QK KE L GP  Q +P+   T GK
Sbjct: 320  KFSITNSLVWQPA---PQQITCQPLPDRSLEPTQLQQKAKEMLLGPHVQVNPYAGSTAGK 376

Query: 454  ERFTYCFCGVISSKCVIRKPGPMQGRCFFGCGNWTASRRAVCNYFVWAS 308
            ++  YC+CGV+S   V+RKPGPMQGR F+GCGNWT +RRA+C YF WAS
Sbjct: 377  DKPMYCYCGVLSRWSVVRKPGPMQGRYFYGCGNWTVTRRAICPYFAWAS 425


>gb|ACG36494.1| histone mRNA exonuclease 1 [Zea mays]
          Length = 437

 Score =  467 bits (1202), Expect = e-129
 Identities = 231/358 (64%), Positives = 257/358 (71%), Gaps = 12/358 (3%)
 Frame = -3

Query: 1345 IYPDIHKLQQSQMNIFENHIYPTNRDYFLPVENRIHYLPYKMFSQGHQHQLQFQDFQYFV 1166
            IY D   ++Q     F+N  Y  NRD+  P+ENR+ YLP+KM  QGH H  Q Q+FQYFV
Sbjct: 80   IYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRVQYLPFKMLPQGHPHDAQLQEFQYFV 139

Query: 1165 VIDFEATCDKERKPHPQEIIEFPSVLVNSVTGQLEASFQTYVRPVYHQLLTDFCKELTGI 986
            VIDFEATCDK   P PQEIIEFPSVLVNS TG+LE  FQTYVRP YHQ LTDFCKELTGI
Sbjct: 140  VIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCKELTGI 199

Query: 985  QQIQVDRGVSLSEALLMHDKWLEDKGIKHKSFAVVTWGNWDCRTMLESECKFKRIRKPPY 806
            QQIQVDRGV L EALLMHDKWLEDKGIK+ +FA+VTW NWDCR MLESEC+FKRIRKPPY
Sbjct: 200  QQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRIRKPPY 259

Query: 805  FNRWINLKALFQEMVSGARCNLMEAVQRAGLTWEGRPHCGLDDARNTARLLALLMHWGFK 626
            FNRWINL+  FQE+    RCNL EAVQ AGLTWEGR HCGLDDARNTARLLALLMH GFK
Sbjct: 260  FNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALLMHRGFK 319

Query: 625  FSITNEL---PPSPPTDHPMA------YSPFXXXXXXXXXXXXXQKLKELPGPITQFHPF 473
            FSITN L   P + P             SP              +  + L  P +Q +P 
Sbjct: 320  FSITNSLVWQPAAAPQSTAATCHFSPDRSPDPVVVQLQHQHQQHKPKEALGSPASQVNPS 379

Query: 472  MDPT---GKERFTYCFCGVISSKCVIRKPGPMQGRCFFGCGNWTASRRAVCNYFVWAS 308
               T   GK+R  YC+CGV+S   V+RKPGPMQGR FFGCGNWTA+RRA+C YF WAS
Sbjct: 380  YAATPAGGKDRAMYCYCGVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFAWAS 437


>tpg|DAA54203.1| TPA: histone mRNA exonuclease 1 [Zea mays]
          Length = 436

 Score =  464 bits (1194), Expect = e-128
 Identities = 230/357 (64%), Positives = 257/357 (71%), Gaps = 11/357 (3%)
 Frame = -3

Query: 1345 IYPDIHKLQQSQMNIFENHIYPTNRDYFLPVENRIHYLPYKMFSQGHQHQLQFQDFQYFV 1166
            IY D   ++Q     F+N  Y  NRD+  P+ENR+ YLP+KM  QGH H  Q Q+FQYFV
Sbjct: 80   IYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRVQYLPFKMLPQGHPHDAQLQEFQYFV 139

Query: 1165 VIDFEATCDKERKPHPQEIIEFPSVLVNSVTGQLEASFQTYVRPVYHQLLTDFCKELTGI 986
            VIDFEATCDK   P PQEIIEFPSVLVNS TG+LE  FQTYVRP YHQ LTDFCKELTGI
Sbjct: 140  VIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCKELTGI 199

Query: 985  QQIQVDRGVSLSEALLMHDKWLEDKGIKHKSFAVVTWGNWDCRTMLESECKFKRIRKPPY 806
            QQIQVDRGV L EALLMHDKWLEDKGIK+ +FA+VTW NWDCR MLESEC+FKRIRKPPY
Sbjct: 200  QQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRIRKPPY 259

Query: 805  FNRWINLKALFQEMVSGARCNLMEAVQRAGLTWEGRPHCGLDDARNTARLLALLMHWGFK 626
            FNRWINL+  FQE+    RCNL EAVQ AGLTWEGR HCGLDDARNTARLLALLMH GFK
Sbjct: 260  FNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALLMHRGFK 319

Query: 625  FSITNEL---PPSPPTDHPMA------YSPFXXXXXXXXXXXXXQKLKELPGPITQFHP- 476
            FSITN L   P + P             SP              +  + L  P +  +P 
Sbjct: 320  FSITNSLVWQPAAAPQSTAATCHFSPDRSPDPVVVQLQHQQQQHKPKEALGSPASLVNPS 379

Query: 475  FMDPT-GKERFTYCFCGVISSKCVIRKPGPMQGRCFFGCGNWTASRRAVCNYFVWAS 308
            +  P  GK+R  YC+CGV+S   V+RKPGPMQGR FFGCGNWTA+RRA+C YF WAS
Sbjct: 380  YATPAGGKDRAMYCYCGVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFAWAS 436


>tpg|DAA54202.1| TPA: hypothetical protein ZEAMMB73_728544 [Zea mays]
          Length = 433

 Score =  464 bits (1194), Expect = e-128
 Identities = 230/357 (64%), Positives = 257/357 (71%), Gaps = 11/357 (3%)
 Frame = -3

Query: 1345 IYPDIHKLQQSQMNIFENHIYPTNRDYFLPVENRIHYLPYKMFSQGHQHQLQFQDFQYFV 1166
            IY D   ++Q     F+N  Y  NRD+  P+ENR+ YLP+KM  QGH H  Q Q+FQYFV
Sbjct: 77   IYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRVQYLPFKMLPQGHPHDAQLQEFQYFV 136

Query: 1165 VIDFEATCDKERKPHPQEIIEFPSVLVNSVTGQLEASFQTYVRPVYHQLLTDFCKELTGI 986
            VIDFEATCDK   P PQEIIEFPSVLVNS TG+LE  FQTYVRP YHQ LTDFCKELTGI
Sbjct: 137  VIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCKELTGI 196

Query: 985  QQIQVDRGVSLSEALLMHDKWLEDKGIKHKSFAVVTWGNWDCRTMLESECKFKRIRKPPY 806
            QQIQVDRGV L EALLMHDKWLEDKGIK+ +FA+VTW NWDCR MLESEC+FKRIRKPPY
Sbjct: 197  QQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRIRKPPY 256

Query: 805  FNRWINLKALFQEMVSGARCNLMEAVQRAGLTWEGRPHCGLDDARNTARLLALLMHWGFK 626
            FNRWINL+  FQE+    RCNL EAVQ AGLTWEGR HCGLDDARNTARLLALLMH GFK
Sbjct: 257  FNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALLMHRGFK 316

Query: 625  FSITNEL---PPSPPTDHPMA------YSPFXXXXXXXXXXXXXQKLKELPGPITQFHP- 476
            FSITN L   P + P             SP              +  + L  P +  +P 
Sbjct: 317  FSITNSLVWQPAAAPQSTAATCHFSPDRSPDPVVVQLQHQQQQHKPKEALGSPASLVNPS 376

Query: 475  FMDPT-GKERFTYCFCGVISSKCVIRKPGPMQGRCFFGCGNWTASRRAVCNYFVWAS 308
            +  P  GK+R  YC+CGV+S   V+RKPGPMQGR FFGCGNWTA+RRA+C YF WAS
Sbjct: 377  YATPAGGKDRAMYCYCGVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFAWAS 433


Top