BLASTX nr result

ID: Dioscorea21_contig00002783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002783
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284579.1| PREDICTED: uncharacterized protein LOC100252...   115   4e-24
ref|XP_002329360.1| predicted protein [Populus trichocarpa] gi|1...   110   2e-22
gb|ABK93118.1| unknown [Populus trichocarpa] gi|118483290|gb|ABK...   110   2e-22
gb|AEL99255.1| hypothetical protein, partial [Silene latifolia]       107   2e-21
gb|AEL99256.1| hypothetical protein, partial [Silene latifolia]       105   5e-21

>ref|XP_002284579.1| PREDICTED: uncharacterized protein LOC100252136 [Vitis vinifera]
           gi|302143071|emb|CBI20366.3| unnamed protein product
           [Vitis vinifera]
          Length = 98

 Score =  115 bits (289), Expect = 4e-24
 Identities = 51/63 (80%), Positives = 56/63 (88%), Gaps = 3/63 (4%)
 Frame = -1

Query: 523 SPAP---SLIARRGLSGGGDHHGPPRINFWQDPLSPSKWKEEHFVLVSLSGWGLLIYGGF 353
           SPAP   SLI RRGL+ GGDHHGPP++NFWQDPLSPSKWKEEHFV+VSLSGWGLL YGG+
Sbjct: 19  SPAPLATSLIHRRGLASGGDHHGPPKVNFWQDPLSPSKWKEEHFVIVSLSGWGLLFYGGY 78

Query: 352 KLF 344
           K F
Sbjct: 79  KFF 81


>ref|XP_002329360.1| predicted protein [Populus trichocarpa] gi|118481328|gb|ABK92607.1|
           unknown [Populus trichocarpa]
           gi|118481455|gb|ABK92670.1| unknown [Populus
           trichocarpa] gi|118483232|gb|ABK93519.1| unknown
           [Populus trichocarpa] gi|222870410|gb|EEF07541.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score =  110 bits (274), Expect = 2e-22
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = -1

Query: 517 APSLIARRGLSGGGDHHGPPRINFWQDPLSPSKWKEEHFVLVSLSGWGLLIYGGFKLFGG 338
           A +LI RRGL+G  DHHGPPRIN WQDP+SPSKWKEEHFV+VSLSGWG+LIYGG+K F G
Sbjct: 27  AAALIHRRGLAGAADHHGPPRINCWQDPMSPSKWKEEHFVIVSLSGWGVLIYGGYKFFTG 86


>gb|ABK93118.1| unknown [Populus trichocarpa] gi|118483290|gb|ABK93547.1| unknown
           [Populus trichocarpa]
          Length = 100

 Score =  110 bits (274), Expect = 2e-22
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = -1

Query: 517 APSLIARRGLSGGGDHHGPPRINFWQDPLSPSKWKEEHFVLVSLSGWGLLIYGGFKLFGG 338
           A +LI RRGL+G  DHHGPPRIN WQDP+SPSKWKEEHFV+VSLSGWG+LIYGG+K F G
Sbjct: 27  AAALIHRRGLAGAADHHGPPRINCWQDPMSPSKWKEEHFVIVSLSGWGVLIYGGYKFFTG 86


>gb|AEL99255.1| hypothetical protein, partial [Silene latifolia]
          Length = 78

 Score =  107 bits (267), Expect = 2e-21
 Identities = 44/57 (77%), Positives = 50/57 (87%)
 Frame = -1

Query: 508 LIARRGLSGGGDHHGPPRINFWQDPLSPSKWKEEHFVLVSLSGWGLLIYGGFKLFGG 338
           L+ RRG +G  DHHGPP++N WQDP SPSKWKEEHFV+VSLSGWGLLIYGG+KLF G
Sbjct: 19  LLQRRGFAGAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIYGGYKLFSG 75


>gb|AEL99256.1| hypothetical protein, partial [Silene latifolia]
          Length = 78

 Score =  105 bits (263), Expect = 5e-21
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = -1

Query: 505 IARRGLSGGGDHHGPPRINFWQDPLSPSKWKEEHFVLVSLSGWGLLIYGGFKLFGG 338
           + RRG +G  DHHGPP++N WQDP SPSKWKEEHFV+VSLSGWGLLIYGG+KLF G
Sbjct: 20  LQRRGFAGAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIYGGYKLFSG 75


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