BLASTX nr result

ID: Dioscorea21_contig00002767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002767
         (1626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus ...   312   1e-82
ref|XP_002308504.1| f-box family protein [Populus trichocarpa] g...   311   3e-82
ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glyci...   298   2e-78
ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucum...   294   4e-77
ref|XP_003526091.1| PREDICTED: F-box only protein 13-like [Glyci...   291   4e-76

>ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544660|gb|EEF46176.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 412

 Score =  312 bits (800), Expect = 1e-82
 Identities = 143/239 (59%), Positives = 189/239 (79%)
 Frame = +3

Query: 6   KAQSCYRIILVYSELAKLTLKVYDASTGFWENEMMLHRKAESSTMSGMAGNETIYFLSKA 185
           K Q  Y+++LV  EL KL+ ++Y++S   W+ E++L RK + S     A +  +YFLSKA
Sbjct: 174 KNQQSYKLVLVSGELPKLSCRMYNSSANCWDEEILLKRKVDESQEFDAADDNAVYFLSKA 233

Query: 186 GDVVAASIQRCSSKQYSSVLIIENGEEVVYFLSHTGSVIACNVTQKYFFEYPRLLPVYSE 365
           G+VVA  +QR  SKQYSSV+ ++NGEE  YFLS +G+++ACN+T K FFEYPRLLPV+ E
Sbjct: 234 GNVVATDMQRSPSKQYSSVMTVKNGEETAYFLSSSGTIVACNLTGKCFFEYPRLLPVFYE 293

Query: 366 YSIDVVDCKGEMLVVVLSEFLESASLRVWRFCKGDRAWRQIAAMPPWMSHEFYGKKADIN 545
           YSID+V+C+GEMLVV+LSEF  SASLR+WRF +  R+W+QIAAMPP MSHEFYGKK DIN
Sbjct: 294 YSIDIVECRGEMLVVLLSEFFGSASLRIWRFSEDIRSWQQIAAMPPAMSHEFYGKKVDIN 353

Query: 546 CVGCGDNIFICINSSKFSSCVMCDVVINEWIELPKCYVNRRPIEFVSAFSFEPRMEVSV 722
           CVG GD IFIC+NS++F S +MC++  N+W+ELPKC++N   +EF+SAFSFEPR+E SV
Sbjct: 354 CVGAGDQIFICLNSAEFFSYIMCNLRNNDWVELPKCFMNGEAVEFMSAFSFEPRIEASV 412


>ref|XP_002308504.1| f-box family protein [Populus trichocarpa]
           gi|222854480|gb|EEE92027.1| f-box family protein
           [Populus trichocarpa]
          Length = 409

 Score =  311 bits (797), Expect = 3e-82
 Identities = 146/234 (62%), Positives = 184/234 (78%)
 Frame = +3

Query: 21  YRIILVYSELAKLTLKVYDASTGFWENEMMLHRKAESSTMSGMAGNETIYFLSKAGDVVA 200
           Y+++LV  EL KL+ KVY++STG W  E+ L RK + S       +  +YFLSKAG+VVA
Sbjct: 176 YKLVLVSGELPKLSCKVYNSSTGCWGEEIFLRRKVDESQEFDSNDDNAVYFLSKAGNVVA 235

Query: 201 ASIQRCSSKQYSSVLIIENGEEVVYFLSHTGSVIACNVTQKYFFEYPRLLPVYSEYSIDV 380
             +QR  SKQYSSV+ +++GEE+VYFLS +G++++CN+T K F EYPRLLPV+ EYSIDV
Sbjct: 236 TDMQRSPSKQYSSVITVKDGEEIVYFLSSSGTIVSCNLTTKCFSEYPRLLPVFCEYSIDV 295

Query: 381 VDCKGEMLVVVLSEFLESASLRVWRFCKGDRAWRQIAAMPPWMSHEFYGKKADINCVGCG 560
           V+CKGEMLVVVLSEF ESA+LR+WRF +  R+W QI AMPP MSHEFYGKK DINCVG G
Sbjct: 296 VECKGEMLVVVLSEFFESANLRIWRFDESIRSWNQIVAMPPAMSHEFYGKKVDINCVGAG 355

Query: 561 DNIFICINSSKFSSCVMCDVVINEWIELPKCYVNRRPIEFVSAFSFEPRMEVSV 722
           D IFIC+NS++F   V+CD+  NEWIELPKC+ N   +EF+SAFSFEPR+E SV
Sbjct: 356 DQIFICLNSAEFFRYVVCDLRTNEWIELPKCFKNGEAVEFMSAFSFEPRIEASV 409


>ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 407

 Score =  298 bits (764), Expect = 2e-78
 Identities = 143/239 (59%), Positives = 184/239 (76%), Gaps = 2/239 (0%)
 Frame = +3

Query: 12  QSCYRIILVYSELAKLTLKVYDASTGFWENEMMLHRKAESSTMS--GMAGNETIYFLSKA 185
           Q  Y+I+LV+ EL  L  KVY++S+G WE+E  L R  + +++       +  +YFLSKA
Sbjct: 169 QLSYKIVLVFGELPNLLFKVYNSSSGCWEDEAALRRNVDDNSLDCDSTDDDNVVYFLSKA 228

Query: 186 GDVVAASIQRCSSKQYSSVLIIENGEEVVYFLSHTGSVIACNVTQKYFFEYPRLLPVYSE 365
           G VVA+S+ R  SKQYSSV+  + G+E VYFLS +G V+ACN+T KYFFEYPRLLPV+SE
Sbjct: 229 GTVVASSMHRSPSKQYSSVITNKEGQETVYFLSSSGMVVACNLTSKYFFEYPRLLPVFSE 288

Query: 366 YSIDVVDCKGEMLVVVLSEFLESASLRVWRFCKGDRAWRQIAAMPPWMSHEFYGKKADIN 545
           YSID+V+C  EMLVV+LSEFLESASLRVW++ + +R W+QIAAMP  MS E+YGKKADIN
Sbjct: 289 YSIDIVECGSEMLVVLLSEFLESASLRVWKYDEANRCWKQIAAMPAAMSQEWYGKKADIN 348

Query: 546 CVGCGDNIFICINSSKFSSCVMCDVVINEWIELPKCYVNRRPIEFVSAFSFEPRMEVSV 722
           CVG GD IFIC+NS +  + V+CD+V N+W ELPKC +N   +EF+SAFSFEPR+E SV
Sbjct: 349 CVGAGDRIFICLNSPELCAYVLCDLVTNKWTELPKCCLNGELMEFMSAFSFEPRIEASV 407


>ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucumis sativus]
           gi|449524430|ref|XP_004169226.1| PREDICTED: F-box only
           protein 13-like [Cucumis sativus]
          Length = 414

 Score =  294 bits (753), Expect = 4e-77
 Identities = 134/234 (57%), Positives = 182/234 (77%)
 Frame = +3

Query: 21  YRIILVYSELAKLTLKVYDASTGFWENEMMLHRKAESSTMSGMAGNETIYFLSKAGDVVA 200
           Y+++LVY ++ KL  KVY ++TG W+ ++ L RK + S       +  +YFLS+ G+VV+
Sbjct: 181 YKLVLVYGQVPKLRFKVYSSTTGCWDEDVALSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240

Query: 201 ASIQRCSSKQYSSVLIIENGEEVVYFLSHTGSVIACNVTQKYFFEYPRLLPVYSEYSIDV 380
            ++QR  SKQYSSV+   NGE+ VYF+S +G+++ACN+ +K F EYPRLLPV+SEYSIDV
Sbjct: 241 TNMQRSPSKQYSSVVTNRNGEDTVYFISSSGTIMACNLNKKCFVEYPRLLPVFSEYSIDV 300

Query: 381 VDCKGEMLVVVLSEFLESASLRVWRFCKGDRAWRQIAAMPPWMSHEFYGKKADINCVGCG 560
           V+C+GEMLVV+LSEFLE+ASLRVWR+ +  R W QIAA+PP MSHE+YGKK DINCVG G
Sbjct: 301 VECQGEMLVVMLSEFLETASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360

Query: 561 DNIFICINSSKFSSCVMCDVVINEWIELPKCYVNRRPIEFVSAFSFEPRMEVSV 722
           D I IC+NS+   + ++CD+V N+W ELPKCY+N   +EF+SAFSFEPR+E +V
Sbjct: 361 DQILICMNSNDLYTYLLCDLVENQWTELPKCYMNGEAVEFMSAFSFEPRIEATV 414


>ref|XP_003526091.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 413

 Score =  291 bits (744), Expect = 4e-76
 Identities = 138/240 (57%), Positives = 185/240 (77%), Gaps = 1/240 (0%)
 Frame = +3

Query: 6   KAQSCYRIILVYSELAKLTLKVYDASTGFWENEMMLHRKAESSTMS-GMAGNETIYFLSK 182
           K Q  ++I+LV+ EL  L  KVY++ +  WE E  L RK E ++M      +  +YFLSK
Sbjct: 174 KDQISFKIVLVFGELPNLLFKVYNSGSNCWEGETALRRKTEDNSMEYDSTDDNVVYFLSK 233

Query: 183 AGDVVAASIQRCSSKQYSSVLIIENGEEVVYFLSHTGSVIACNVTQKYFFEYPRLLPVYS 362
           AG VVA+++QR  SKQ+SSV+  +N +E+VYFLS++G+V+ACN+T K F EYPRLLPVY+
Sbjct: 234 AGIVVASNMQRSPSKQFSSVITNKNDQEIVYFLSYSGNVVACNLTCKCFSEYPRLLPVYN 293

Query: 363 EYSIDVVDCKGEMLVVVLSEFLESASLRVWRFCKGDRAWRQIAAMPPWMSHEFYGKKADI 542
           EYSIDVV+C GEMLVV+LSEFLE+ +LRVW++ + +R W QIAAMP   SHE+YGKKADI
Sbjct: 294 EYSIDVVECNGEMLVVLLSEFLETTTLRVWKYDEANRGWHQIAAMPAANSHEWYGKKADI 353

Query: 543 NCVGCGDNIFICINSSKFSSCVMCDVVINEWIELPKCYVNRRPIEFVSAFSFEPRMEVSV 722
           NCVG G+ IFIC+NS++  + VMCD+  N+W+ELP C +N + I+F+SAFSFEPR+E SV
Sbjct: 354 NCVGAGNQIFICLNSTELCTYVMCDLETNKWVELPNCCINGQVIDFMSAFSFEPRIEASV 413


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