BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002750
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nico...   153   2e-35
gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nico...   150   1e-34
gb|ABF72923.2| chloroplast chlorophyll a/b-binding protein [Sola...   150   1e-34
gb|ABF72925.1| chloroplast chlorophyll a/b-binding protein, part...   150   1e-34
sp|P54773.1|PSBS_SOLLC RecName: Full=Photosystem II 22 kDa prote...   149   2e-34

>gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
           gi|186926676|gb|ACC95540.1| chloroplast photosystem II
           22 kDa component [Nicotiana benthamiana]
          Length = 277

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/81 (90%), Positives = 78/81 (96%)
 Frame = -3

Query: 244 AIGALGDRGRFVDDPAPPTGLDKAVIPPGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQ 65
           AIGALGDRG+F+DDP PPTGLDKAVIPPGKGF+SALGL EGGPLFGFTK+NELFVGRLAQ
Sbjct: 156 AIGALGDRGKFIDDPTPPTGLDKAVIPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQ 215

Query: 64  LGIAFSLIGEIITGKGALGQL 2
           LGIAFS+IGEIITGKGAL QL
Sbjct: 216 LGIAFSIIGEIITGKGALAQL 236



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -3

Query: 178 KAVIP-PGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALGQL 2
           K V+P P +     +    GG   GFTK NELFVGR+A +G A SL+GE ITGKG L QL
Sbjct: 73  KKVVPKPKEKVEDGIFGTSGG--IGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQL 130


>gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
          Length = 274

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/81 (88%), Positives = 77/81 (95%)
 Frame = -3

Query: 244 AIGALGDRGRFVDDPAPPTGLDKAVIPPGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQ 65
           AIGALGDRG+F+DDP P TGLDKAVIPPGKGF+SALGL EGGPLFGFTK+NELFVGRLAQ
Sbjct: 153 AIGALGDRGKFIDDPVPATGLDKAVIPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQ 212

Query: 64  LGIAFSLIGEIITGKGALGQL 2
           LGIAFS+IGEIITGKGAL QL
Sbjct: 213 LGIAFSIIGEIITGKGALAQL 233



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -3

Query: 178 KAVIP-PGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALGQL 2
           K V+P P +     +    GG   GFTK NELFVGR+A +G A SL+GE ITGKG L QL
Sbjct: 70  KKVVPKPKEKVEDGIFGTSGG--IGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQL 127


>gb|ABF72923.2| chloroplast chlorophyll a/b-binding protein [Solanum nigrum]
           gi|295824591|gb|ABF72924.2| chloroplast chlorophyll
           a/b-binding protein [Solanum nigrum]
          Length = 276

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/81 (88%), Positives = 78/81 (96%)
 Frame = -3

Query: 244 AIGALGDRGRFVDDPAPPTGLDKAVIPPGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQ 65
           AIGALGDRG+FVDDPAPPTGL+KAVIPPG+ F+SALGL EGGPLFGFTK+NELFVGRLAQ
Sbjct: 155 AIGALGDRGKFVDDPAPPTGLEKAVIPPGRSFKSALGLSEGGPLFGFTKANELFVGRLAQ 214

Query: 64  LGIAFSLIGEIITGKGALGQL 2
           LGIAFS+IGEIITGKGAL QL
Sbjct: 215 LGIAFSIIGEIITGKGALAQL 235



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/66 (51%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 APPTGLDKAVIPPGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGK 20
           APP    K V PP +  +   G+       GFTK NELFVGR+A +G A SL+GE ITGK
Sbjct: 68  APP----KKVAPPKQKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGK 123

Query: 19  GALGQL 2
           G L QL
Sbjct: 124 GILAQL 129


>gb|ABF72925.1| chloroplast chlorophyll a/b-binding protein, partial [Solanum
           nigrum] gi|104569543|gb|ABF72926.1| chloroplast
           chlorophyll a/b-binding protein [Solanum nigrum]
          Length = 268

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/81 (88%), Positives = 78/81 (96%)
 Frame = -3

Query: 244 AIGALGDRGRFVDDPAPPTGLDKAVIPPGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQ 65
           AIGALGDRG+FVDDPAPPTGL+KAVIPPG+ F+SALGL EGGPLFGFTK+NELFVGRLAQ
Sbjct: 155 AIGALGDRGKFVDDPAPPTGLEKAVIPPGRSFKSALGLSEGGPLFGFTKANELFVGRLAQ 214

Query: 64  LGIAFSLIGEIITGKGALGQL 2
           LGIAFS+IGEIITGKGAL QL
Sbjct: 215 LGIAFSIIGEIITGKGALAQL 235



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/66 (51%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 APPTGLDKAVIPPGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGK 20
           APP    K V PP +  +   G+       GFTK NELFVGR+A +G A SL+GE ITGK
Sbjct: 68  APP----KKVAPPKQKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGK 123

Query: 19  GALGQL 2
           G L QL
Sbjct: 124 GILAQL 129


>sp|P54773.1|PSBS_SOLLC RecName: Full=Photosystem II 22 kDa protein, chloroplastic;
           AltName: Full=CP22; Flags: Precursor
           gi|706853|gb|AAA63649.1| 22 kDa component of photosystem
           II [Solanum lycopersicum]
          Length = 276

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/81 (88%), Positives = 77/81 (95%)
 Frame = -3

Query: 244 AIGALGDRGRFVDDPAPPTGLDKAVIPPGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQ 65
           AIGALGDRG+FVDDP PPTGL+KAVIPPGK F+SALGL EGGPLFGFTK+NELFVGRLAQ
Sbjct: 155 AIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQ 214

Query: 64  LGIAFSLIGEIITGKGALGQL 2
           LGIAFS+IGEIITGKGAL QL
Sbjct: 215 LGIAFSIIGEIITGKGALAQL 235



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/66 (51%), Positives = 40/66 (60%)
 Frame = -3

Query: 199 APPTGLDKAVIPPGKGFRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGK 20
           APP    K V PP +  +   G+       GFTK NELFVGR+A +G A SL+GE ITGK
Sbjct: 68  APP----KKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGK 123

Query: 19  GALGQL 2
           G L QL
Sbjct: 124 GILAQL 129