BLASTX nr result

ID: Dioscorea21_contig00002725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002725
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95187.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   5e-10
ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG4...    69   5e-10
gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-...    69   5e-10
ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [S...    68   9e-10
ref|NP_001050490.1| Os03g0562200 [Oryza sativa Japonica Group] g...    66   3e-09

>dbj|BAJ95187.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 297

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/62 (53%), Positives = 42/62 (67%)
 Frame = +2

Query: 74  RCPGLLYFSLESPDVDEDKFCEAISKTERLKGMAVHENLITEEVLGHVNRCCSAFSELKI 253
           R P L YFS  +  +  D FC AISK + LKGMAV E+L+  +VL HV++CC  F ELK+
Sbjct: 119 RSPNLQYFSFPTTCMTSDDFCGAISKLQSLKGMAVDESLVHYDVLLHVHQCCPGFRELKV 178

Query: 254 FA 259
           FA
Sbjct: 179 FA 180


>ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG44757.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/62 (54%), Positives = 43/62 (69%)
 Frame = +2

Query: 74  RCPGLLYFSLESPDVDEDKFCEAISKTERLKGMAVHENLITEEVLGHVNRCCSAFSELKI 253
           RCP L YFSL S  +  D+FC+AI   + LKGMAV E+LI  +VL HV++CC  F ELK+
Sbjct: 119 RCPNLHYFSLPSTCMTYDQFCKAIGGLQSLKGMAVDESLINYDVLLHVHQCCPDFVELKV 178

Query: 254 FA 259
            A
Sbjct: 179 SA 180


>gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/62 (54%), Positives = 43/62 (69%)
 Frame = +2

Query: 74  RCPGLLYFSLESPDVDEDKFCEAISKTERLKGMAVHENLITEEVLGHVNRCCSAFSELKI 253
           RCP L YFSL S  +  D+FC+AI   + LKGMAV E+LI  +VL HV++CC  F ELK+
Sbjct: 119 RCPNLHYFSLPSTCMTYDQFCKAIGGLQSLKGMAVDESLINYDVLLHVHQCCPDFVELKV 178

Query: 254 FA 259
            A
Sbjct: 179 SA 180


>ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [Sorghum bicolor]
           gi|241918198|gb|EER91342.1| hypothetical protein
           SORBIDRAFT_01g016660 [Sorghum bicolor]
          Length = 297

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/62 (54%), Positives = 41/62 (66%)
 Frame = +2

Query: 74  RCPGLLYFSLESPDVDEDKFCEAISKTERLKGMAVHENLITEEVLGHVNRCCSAFSELKI 253
           RCP L YFSL S  +  D+FC+AI     LKGMAV E LI  +VL HV++CC  F ELK+
Sbjct: 119 RCPNLQYFSLPSTCMTYDQFCKAIGGLHSLKGMAVDETLINYDVLLHVHQCCPDFVELKV 178

Query: 254 FA 259
            A
Sbjct: 179 SA 180


>ref|NP_001050490.1| Os03g0562200 [Oryza sativa Japonica Group]
           gi|108709324|gb|ABF97119.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113548961|dbj|BAF12404.1| Os03g0562200 [Oryza sativa
           Japonica Group] gi|215686513|dbj|BAG87774.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215706384|dbj|BAG93240.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193151|gb|EEC75578.1| hypothetical protein
           OsI_12264 [Oryza sativa Indica Group]
          Length = 305

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/62 (53%), Positives = 42/62 (67%)
 Frame = +2

Query: 74  RCPGLLYFSLESPDVDEDKFCEAISKTERLKGMAVHENLITEEVLGHVNRCCSAFSELKI 253
           R P L YFSL +  +  D+F +AI K + LKGMAV E LI  +VL HV++CC  F ELK+
Sbjct: 127 RNPNLHYFSLPATCITYDQFRKAIDKLQFLKGMAVDEGLINHDVLSHVHQCCPDFLELKV 186

Query: 254 FA 259
           FA
Sbjct: 187 FA 188


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