BLASTX nr result

ID: Dioscorea21_contig00002715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002715
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236460.1| uncharacterized protein LOC100305515 [Glycin...   223   1e-56
ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|1...   221   4e-56
ref|XP_002452615.1| hypothetical protein SORBIDRAFT_04g029160 [S...   221   5e-56
ref|NP_001057374.1| Os06g0274200 [Oryza sativa Japonica Group] g...   221   6e-56
ref|XP_003524501.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonu...   221   6e-56

>ref|NP_001236460.1| uncharacterized protein LOC100305515 [Glycine max]
           gi|356562662|ref|XP_003549588.1| PREDICTED: H/ACA
           ribonucleoprotein complex subunit 2-like protein-like
           [Glycine max] gi|255625761|gb|ACU13225.1| unknown
           [Glycine max]
          Length = 157

 Score =  223 bits (568), Expect = 1e-56
 Identities = 109/127 (85%), Positives = 118/127 (92%)
 Frame = +2

Query: 119 VITLAPIAKPLASKKLCKRTLKLVRKASESKCLKRGVKEVVKSIRRGNKGLCVIAGNISP 298
           ++ LAPIAKPLA KKLCKRTLKLVR+A+E KCLKRGVKEVVKSIRRG+KGLCVIAGNISP
Sbjct: 20  MLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISP 79

Query: 299 IDVITHVPILCEESDIPYIYVPSKEDLATAGATKRPTCCVLVQTKPTKGELDQDVQEKLQ 478
           IDVITHVPILCEESDIPYIYVPSKEDLA AGATKRPTCCVLVQTKP KGE++Q  QEKL+
Sbjct: 80  IDVITHVPILCEESDIPYIYVPSKEDLAGAGATKRPTCCVLVQTKPAKGEIEQGEQEKLK 139

Query: 479 KEYQQVV 499
            +Y QVV
Sbjct: 140 SDYDQVV 146


>ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|118483385|gb|ABK93593.1|
           unknown [Populus trichocarpa]
           gi|118485555|gb|ABK94629.1| unknown [Populus
           trichocarpa] gi|222851227|gb|EEE88774.1| predicted
           protein [Populus trichocarpa]
          Length = 155

 Score =  221 bits (564), Expect = 4e-56
 Identities = 108/127 (85%), Positives = 119/127 (93%)
 Frame = +2

Query: 119 VITLAPIAKPLASKKLCKRTLKLVRKASESKCLKRGVKEVVKSIRRGNKGLCVIAGNISP 298
           + +LAPIAKPLA KKLCKRTLKLVRKASESKCLKRGVKEVVKSIRRG+KGLC+IAGNISP
Sbjct: 18  ITSLAPIAKPLAGKKLCKRTLKLVRKASESKCLKRGVKEVVKSIRRGHKGLCIIAGNISP 77

Query: 299 IDVITHVPILCEESDIPYIYVPSKEDLATAGATKRPTCCVLVQTKPTKGELDQDVQEKLQ 478
           IDVITHVPILCEESDIPY+YV SKEDLA+AGATKRPTCCVLV TKPTKGE+ ++ QEKL+
Sbjct: 78  IDVITHVPILCEESDIPYVYVTSKEDLASAGATKRPTCCVLVLTKPTKGEIGKEDQEKLK 137

Query: 479 KEYQQVV 499
            +Y QVV
Sbjct: 138 ADYDQVV 144


>ref|XP_002452615.1| hypothetical protein SORBIDRAFT_04g029160 [Sorghum bicolor]
           gi|241932446|gb|EES05591.1| hypothetical protein
           SORBIDRAFT_04g029160 [Sorghum bicolor]
          Length = 150

 Score =  221 bits (563), Expect = 5e-56
 Identities = 105/126 (83%), Positives = 118/126 (93%)
 Frame = +2

Query: 122 ITLAPIAKPLASKKLCKRTLKLVRKASESKCLKRGVKEVVKSIRRGNKGLCVIAGNISPI 301
           + L PIAKPLA KKLCKRTLKLVR+ASE+KCLKRGVKEVVKSIRRGNKGLCVIAGN+SPI
Sbjct: 14  VALMPIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAGNVSPI 73

Query: 302 DVITHVPILCEESDIPYIYVPSKEDLATAGATKRPTCCVLVQTKPTKGELDQDVQEKLQK 481
           DVITHVPILCEE+++PYIYVPSKEDLATAG TKRPTCCVLV TKPTKGEL ++V++KL+ 
Sbjct: 74  DVITHVPILCEEANVPYIYVPSKEDLATAGTTKRPTCCVLVLTKPTKGELSEEVKDKLKS 133

Query: 482 EYQQVV 499
           +Y QVV
Sbjct: 134 DYDQVV 139


>ref|NP_001057374.1| Os06g0274200 [Oryza sativa Japonica Group]
           gi|11862950|dbj|BAB19331.1| putative nucleolar protein
           family A member 2 [Oryza sativa Japonica Group]
           gi|23589940|dbj|BAC20622.1| putative nucleolar protein
           family A member 2 [Oryza sativa Japonica Group]
           gi|113595414|dbj|BAF19288.1| Os06g0274200 [Oryza sativa
           Japonica Group] gi|215706458|dbj|BAG93314.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218197956|gb|EEC80383.1| hypothetical protein
           OsI_22506 [Oryza sativa Indica Group]
           gi|222635381|gb|EEE65513.1| hypothetical protein
           OsJ_20951 [Oryza sativa Japonica Group]
           gi|290767972|gb|ADD60680.1| putative nucleolar protein
           family a member 2 [Oryza australiensis]
           gi|290767986|gb|ADD60693.1| putative nucleolar protein
           family a member 2 [Oryza officinalis]
          Length = 150

 Score =  221 bits (562), Expect = 6e-56
 Identities = 105/126 (83%), Positives = 118/126 (93%)
 Frame = +2

Query: 122 ITLAPIAKPLASKKLCKRTLKLVRKASESKCLKRGVKEVVKSIRRGNKGLCVIAGNISPI 301
           + LAPIAKPLA KKLCKRTLKLVR+ASE+KCLKRGVKEVVKSIRRG KGLC+IAGNISPI
Sbjct: 14  VALAPIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGQKGLCIIAGNISPI 73

Query: 302 DVITHVPILCEESDIPYIYVPSKEDLATAGATKRPTCCVLVQTKPTKGELDQDVQEKLQK 481
           DVITHVPILCEE++IPY+YVPSKEDLATAG TKRPTCCVLV TKP KGEL++DV+EKL+ 
Sbjct: 74  DVITHVPILCEEANIPYVYVPSKEDLATAGTTKRPTCCVLVLTKPAKGELEEDVKEKLKT 133

Query: 482 EYQQVV 499
           +Y QV+
Sbjct: 134 DYDQVM 139


>ref|XP_003524501.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
           subunit 2-like protein-like [Glycine max]
          Length = 166

 Score =  221 bits (562), Expect = 6e-56
 Identities = 107/127 (84%), Positives = 118/127 (92%)
 Frame = +2

Query: 119 VITLAPIAKPLASKKLCKRTLKLVRKASESKCLKRGVKEVVKSIRRGNKGLCVIAGNISP 298
           ++ LAPIAKPLA KKLCKRTLKLVR+A+E KCLKRGVKEVVKSIRRG+KGLCVIAGNISP
Sbjct: 14  MLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISP 73

Query: 299 IDVITHVPILCEESDIPYIYVPSKEDLATAGATKRPTCCVLVQTKPTKGELDQDVQEKLQ 478
           IDVITH+PILCE+SDIPYIYVPSKEDLA AGATKRPTCCVLVQTKP KGE++Q  QEKL+
Sbjct: 74  IDVITHLPILCEDSDIPYIYVPSKEDLAGAGATKRPTCCVLVQTKPAKGEIEQGEQEKLK 133

Query: 479 KEYQQVV 499
            +Y QVV
Sbjct: 134 SDYDQVV 140


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