BLASTX nr result

ID: Dioscorea21_contig00002703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002703
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050078.1| Os03g0343500 [Oryza sativa Japonica Group] g...   159   2e-37
ref|NP_001060613.1| Os07g0674200 [Oryza sativa Japonica Group] g...   157   1e-36
ref|XP_002315515.1| predicted protein [Populus trichocarpa] gi|1...   157   1e-36
ref|XP_002321004.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36
ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36

>ref|NP_001050078.1| Os03g0343500 [Oryza sativa Japonica Group]
           gi|42733478|dbj|BAD11336.1| BRI1-KD interacting protein
           108 [Oryza sativa Japonica Group]
           gi|108708084|gb|ABF95879.1| 60S ribosomal protein L22-2,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113548549|dbj|BAF11992.1| Os03g0343500 [Oryza sativa
           Japonica Group] gi|125543823|gb|EAY89962.1| hypothetical
           protein OsI_11522 [Oryza sativa Indica Group]
           gi|215765091|dbj|BAG86788.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765349|dbj|BAG87046.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215768292|dbj|BAH00521.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 131

 Score =  159 bits (403), Expect = 2e-37
 Identities = 78/106 (73%), Positives = 87/106 (82%)
 Frame = +1

Query: 112 TFVIDCAKPVEDKIMDIASLEKFLQERIKVGGGKPGAFGDAVTVTREKTKITVITDGPFS 291
           TFVIDCAKPV+DKIM+IASLEKFLQERIKV GGK G  G++VTV+R+KTK+TV +DGPFS
Sbjct: 23  TFVIDCAKPVDDKIMEIASLEKFLQERIKVAGGKAGNLGESVTVSRDKTKVTVTSDGPFS 82

Query: 292 XXXXXXXXXXXXXXHNVRDWLRVISSNKDRNVYELRYFNIAENEGE 429
                         HNVRDWLRVI+SNKDRNVYELRYFNIAENEGE
Sbjct: 83  KRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGE 128


>ref|NP_001060613.1| Os07g0674200 [Oryza sativa Japonica Group] gi|315113281|pdb|3IZR|W
           Chain W, Localization Of The Large Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|34393853|dbj|BAC83533.1|
           putative 60S ribosomal protein L22 [Oryza sativa
           Japonica Group] gi|34395084|dbj|BAC84770.1| putative 60S
           ribosomal protein L22 [Oryza sativa Japonica Group]
           gi|113612149|dbj|BAF22527.1| Os07g0674200 [Oryza sativa
           Japonica Group] gi|125559577|gb|EAZ05113.1| hypothetical
           protein OsI_27305 [Oryza sativa Indica Group]
           gi|125601487|gb|EAZ41063.1| hypothetical protein
           OsJ_25551 [Oryza sativa Japonica Group]
           gi|215764943|dbj|BAG86640.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 130

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/106 (72%), Positives = 86/106 (81%)
 Frame = +1

Query: 112 TFVIDCAKPVEDKIMDIASLEKFLQERIKVGGGKPGAFGDAVTVTREKTKITVITDGPFS 291
           +FVIDC+KPVEDKIM+IASLEKFLQERIKV GGK G  GD+VTVTR+KTK+TV +DG FS
Sbjct: 22  SFVIDCSKPVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKTKVTVTSDGAFS 81

Query: 292 XXXXXXXXXXXXXXHNVRDWLRVISSNKDRNVYELRYFNIAENEGE 429
                         HNVRDWLRVI++NKDRNVYELRYFNIAENEGE
Sbjct: 82  KRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGE 127


>ref|XP_002315515.1| predicted protein [Populus trichocarpa] gi|118481336|gb|ABK92611.1|
           unknown [Populus trichocarpa]
           gi|222864555|gb|EEF01686.1| predicted protein [Populus
           trichocarpa]
          Length = 127

 Score =  157 bits (396), Expect = 1e-36
 Identities = 81/106 (76%), Positives = 84/106 (79%)
 Frame = +1

Query: 112 TFVIDCAKPVEDKIMDIASLEKFLQERIKVGGGKPGAFGDAVTVTREKTKITVITDGPFS 291
           TF IDCAKPVEDKIMDIASLEKFLQERIKVGG KPGA GD+VTVTR+K+KITV  D  FS
Sbjct: 20  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGG-KPGALGDSVTVTRDKSKITVTCDSSFS 78

Query: 292 XXXXXXXXXXXXXXHNVRDWLRVISSNKDRNVYELRYFNIAENEGE 429
                         HNVRDWLRVISSNKDRN YELRYFNIAENEGE
Sbjct: 79  KRYLKYLTKKYLKKHNVRDWLRVISSNKDRNAYELRYFNIAENEGE 124


>ref|XP_002321004.1| predicted protein [Populus trichocarpa] gi|222861777|gb|EEE99319.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  156 bits (395), Expect = 1e-36
 Identities = 82/106 (77%), Positives = 85/106 (80%)
 Frame = +1

Query: 112 TFVIDCAKPVEDKIMDIASLEKFLQERIKVGGGKPGAFGDAVTVTREKTKITVITDGPFS 291
           +FVIDCAKPVEDKIMDIASLEKFLQERIKVGG K GA GD+VTVTREK KITV +D  FS
Sbjct: 9   SFVIDCAKPVEDKIMDIASLEKFLQERIKVGG-KAGALGDSVTVTREKNKITVTSDSNFS 67

Query: 292 XXXXXXXXXXXXXXHNVRDWLRVISSNKDRNVYELRYFNIAENEGE 429
                         HNVRDWLRVISSNKDRNVYELRYFNIAENEGE
Sbjct: 68  KRYLKYLTKKYLKKHNVRDWLRVISSNKDRNVYELRYFNIAENEGE 113


>ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|222857886|gb|EEE95433.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  156 bits (395), Expect = 1e-36
 Identities = 82/106 (77%), Positives = 84/106 (79%)
 Frame = +1

Query: 112 TFVIDCAKPVEDKIMDIASLEKFLQERIKVGGGKPGAFGDAVTVTREKTKITVITDGPFS 291
           TF IDCAKPVEDKIMDIASLEKFLQERIKVGG K GA GDAVTVTREK KITV +D  FS
Sbjct: 10  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGG-KAGALGDAVTVTREKNKITVTSDSNFS 68

Query: 292 XXXXXXXXXXXXXXHNVRDWLRVISSNKDRNVYELRYFNIAENEGE 429
                         HNVRDWLRVI+SNKDRNVYELRYFNIAENEGE
Sbjct: 69  KRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGE 114


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