BLASTX nr result
ID: Dioscorea21_contig00002668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002668
(2376 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin... 176 3e-41
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 159 3e-36
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin... 159 3e-36
ref|XP_002306134.1| predicted protein [Populus trichocarpa] gi|2... 155 5e-35
ref|XP_002886231.1| zinc finger (CCCH-type) family protein [Arab... 144 8e-32
>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis
vinifera]
Length = 1643
Score = 176 bits (446), Expect = 3e-41
Identities = 217/824 (26%), Positives = 318/824 (38%), Gaps = 97/824 (11%)
Frame = -3
Query: 2374 DPHMDPGYESADE--EPDDKRRDTYLRSRESSSLRKAREAGYLGKGGSSSS--------- 2228
DP+MDP Y S ++ E DDK++D R S +K RE +GG +
Sbjct: 785 DPNMDPSYMSDEDAGESDDKKQDVI--PRFSGLSKKGREPFSPRRGGDIPNDMGSRALKN 842
Query: 2227 --TWNERKVSETSS------EQAAGSRDRV----ESQRKDVSQLNVQSTPAN-------L 2105
T NER ++ ++ E AA + +R ++Q D N P N +
Sbjct: 843 LVTTNERGRNKCTTFLPEKEEGAAKAHEREKESSQNQGGDAYGSNCWEKPRNQVDPIGSV 902
Query: 2104 ETGVWNQLGKKAGQSSDIPSETMPASLPTGMVTQPVVNETEKIWHYKDPSGKIQGPFSMA 1925
G NQ ++G SS + SET +L TG V NE +KIWHY+DP+GKIQGPF M
Sbjct: 903 TGGCTNQAVVRSGLSSGVASETSTTTLSTGTVLS-ANNENDKIWHYQDPAGKIQGPFGMV 961
Query: 1924 QLRKWSTTGYFPEKLRIWKTSEKQDDSILLSDAMNGKFLKDPPPHEPQLSVFSQSGRVTS 1745
QLRKWS G+FP LRIW+ +EKQDDSILL+DAMN ++ K+PP L Q V+
Sbjct: 962 QLRKWSANGFFPPHLRIWRMNEKQDDSILLTDAMNLQYHKEPPLQNNSLLQSQQVRVVSK 1021
Query: 1744 VTEN------RGNSAPLWTDNRQTGRNLRTPNDASPLATGNLEIAKSDKWASQPTIWSP- 1586
EN G+ W N+ NDA+ ++ GN E+ K D W S + WS
Sbjct: 1022 DRENNWDGGLNGSMNATWIGNK-LNEGPGNSNDAT-ISNGNNELVKRDGWGSCSSSWSTP 1079
Query: 1585 ----SSREASVNT-----------SALSRQVQGHDXXXXXXXXXXXXXXXXSY--QERGV 1457
+S+E + + S+ S Q Q + + GV
Sbjct: 1080 ADIMNSKEVEIGSFSQGWDSLKGNSSWSDQPQVYSSLSSSTLSGKSFGTGLHQGREGHGV 1139
Query: 1456 HGGNAGEQMGHRNS-----------WSSNRPTGEQKAQATFDTSKPWGNDPS-------- 1334
+ G+ G+ NS S P + + +S W ++
Sbjct: 1140 ERWDPGQNHGNLNSHRTAVVQVNSGHSGQSPKENCRPLSIISSSSGWDSNFDVVSVAKLS 1199
Query: 1333 ------------SLPTPTPQATSMVWTGSQAALNSSAVSVQHLMNTG--WGTTPDXXXXX 1196
+LP+PTP+ + W G A S S + ++G W T
Sbjct: 1200 KTLEQDHDINFPNLPSPTPKPSDGDWKGQAAESKQSVSSDVPVQDSGPSWSTASSLVGGG 1259
Query: 1195 XXXXXXXAPKETEVGRSLVSLPITSLSDFQASHPQLSPLDVAGVLRSQLNSEPLPADNMS 1016
+ + + + AS L P +VA + SE + + S
Sbjct: 1260 TKLPEVASDWGGYSSPTPMKPSVEEWDSTLASVSSLKPTEVASDHAATPTSESVQLTHSS 1319
Query: 1015 PVKNPIVFSGPSSREICGRNQFFESDCPSPTPKSEQTADDILSSEYSQQTSLNG---RQM 845
P P Q ++ + +E + D+L +E SL+G
Sbjct: 1320 P---------PYPTPNASSWQPIDTGPTEISSVTEASVSDLL-AEVEAMESLDGLPSPTS 1369
Query: 844 IPQDGGR--SDSVYGLFSEGGNLPSRPDSLTESCANVVHSVPADARIKAETNALDSASSH 671
+ + G S F+ L PD N S D ++ +++ + S+
Sbjct: 1370 VMKCSGELTQGSKNDCFNSVEGLSPTPD----PAKNDALSSTGDFQLTSQS----TMSAE 1421
Query: 670 RSEASTGPQVHPDMKSGEWSMXXXXXXXXXXXXXXGINSTTRSNNQIGQYATTSDGSKML 491
AS + PD KS S SN+++ SDGS
Sbjct: 1422 PCGASHTDVLDPDKKSVGHS---------------------SSNDKVEVEKKPSDGS--- 1457
Query: 490 TTSQLTANASNETAQPSVKDVQNTGW----SVPTPNLNANMGQAQGTGNVGAMVQGSLNA 323
+Q A + + PS DV W V P + T N G V + +
Sbjct: 1458 -VNQWEAGSDIQPPAPST-DVPVNQWEAGSDVQPPAPSMASWNVAATDNDGRAVSETTDT 1515
Query: 322 GWGMVPQNNVNMAWGIPAQGNSNMNVGW-STQTPVNTNANLAWG 194
GW V Q N N+ WG P QG N+ VGW S+Q NAN+ WG
Sbjct: 1516 GWRAV-QGNSNLEWGGPTQG--NIEVGWESSQGMAQGNANVNWG 1556
>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 19-like [Cucumis sativus]
Length = 1475
Score = 159 bits (402), Expect = 3e-36
Identities = 112/303 (36%), Positives = 157/303 (51%), Gaps = 47/303 (15%)
Frame = -3
Query: 2374 DPHMDPGYESADE-EPDDKRRDTYLRSRESSSLRKAREAGYLGKGGSS-SSTWN-ERKVS 2204
DP+MDP +ES DE E DDKRR+TY SR +S R+ RE GKGGS + +W+ R S
Sbjct: 735 DPNMDPSHESEDEDEADDKRRETYTLSRSTSFGRRTREPVSPGKGGSHLNDSWSGTRNFS 794
Query: 2203 ETS---------------SEQAAGSRDRV---------ESQRKDVSQLNVQSTPANLETG 2096
T+ + A GS + + E K S+ + Q +P++ E
Sbjct: 795 NTNRDMSRNLSGKGFANQGDDAIGSGEIINETSWGHGRERDVKKTSKWDKQVSPSS-EIT 853
Query: 2095 VWNQLGKKAGQSSDIPSETMPASLPTGMVTQPV-VNETEKIWHYKDPSGKIQGPFSMAQL 1919
N L A +SS S AS G VNE+EKIWHY+DPSGK+QGPFSM QL
Sbjct: 854 ARNALSGAASESSAAHSVNPAASSSVGTTQNAATVNESEKIWHYQDPSGKVQGPFSMVQL 913
Query: 1918 RKWSTTGYFPEKLRIWKTSEKQDDSILLSDAMNGKFLKDPPPHEPQLSVF---------S 1766
RKWS TGYFP LRIW+ S++Q+DS+LL+D + GK KD P L V
Sbjct: 914 RKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKISKDTPLTSNSLQVHPNSSPFVGRP 973
Query: 1765 QSGRVTSVTENRGNSAPLWTDN-----RQTGRNLRTPNDASPL---ATGNLEIAK--SDK 1616
Q G + S + + S+ N + +G ++ N+ SP +G++++ + D+
Sbjct: 974 QGGTLQSGVDGQNASSSNSHTNPTSYDQSSGGRWKSQNEVSPTGRPVSGSIKVPRYSGDR 1033
Query: 1615 WAS 1607
W+S
Sbjct: 1034 WSS 1036
>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Cucumis sativus]
Length = 1470
Score = 159 bits (402), Expect = 3e-36
Identities = 112/303 (36%), Positives = 157/303 (51%), Gaps = 47/303 (15%)
Frame = -3
Query: 2374 DPHMDPGYESADE-EPDDKRRDTYLRSRESSSLRKAREAGYLGKGGSS-SSTWN-ERKVS 2204
DP+MDP +ES DE E DDKRR+TY SR +S R+ RE GKGGS + +W+ R S
Sbjct: 735 DPNMDPSHESEDEDEADDKRRETYTLSRSTSFGRRTREPVSPGKGGSHLNDSWSGTRNFS 794
Query: 2203 ETS---------------SEQAAGSRDRV---------ESQRKDVSQLNVQSTPANLETG 2096
T+ + A GS + + E K S+ + Q +P++ E
Sbjct: 795 NTNRDMSRNLSGKGFANQGDDAIGSGEIINETSWGHGRERDVKKTSKWDKQVSPSS-EIT 853
Query: 2095 VWNQLGKKAGQSSDIPSETMPASLPTGMVTQPV-VNETEKIWHYKDPSGKIQGPFSMAQL 1919
N L A +SS S AS G VNE+EKIWHY+DPSGK+QGPFSM QL
Sbjct: 854 ARNALSGAASESSAAHSVNPAASSSVGTTQNAATVNESEKIWHYQDPSGKVQGPFSMVQL 913
Query: 1918 RKWSTTGYFPEKLRIWKTSEKQDDSILLSDAMNGKFLKDPPPHEPQLSVF---------S 1766
RKWS TGYFP LRIW+ S++Q+DS+LL+D + GK KD P L V
Sbjct: 914 RKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKISKDTPLTSNSLQVHPNSSPFVGRP 973
Query: 1765 QSGRVTSVTENRGNSAPLWTDN-----RQTGRNLRTPNDASPL---ATGNLEIAK--SDK 1616
Q G + S + + S+ N + +G ++ N+ SP +G++++ + D+
Sbjct: 974 QGGTLQSGVDGQNASSSNSHTNPTSYDQSSGGRWKSQNEVSPTGRPVSGSIKVPRYSGDR 1033
Query: 1615 WAS 1607
W+S
Sbjct: 1034 WSS 1036
>ref|XP_002306134.1| predicted protein [Populus trichocarpa] gi|222849098|gb|EEE86645.1|
predicted protein [Populus trichocarpa]
Length = 657
Score = 155 bits (392), Expect = 5e-35
Identities = 114/294 (38%), Positives = 155/294 (52%), Gaps = 30/294 (10%)
Frame = -3
Query: 2374 DPHMDPGYESADEE--PDDKRRDTYLRSRESSSLRKAREAGYLGKGG-SSSSTWNERK-V 2207
DP+MDP +ES ++E +DKR++ LR R S RK RE KGG +S+ TW K
Sbjct: 33 DPNMDPSHESDEDEGETEDKRQENSLRPRGSGFSRKGREPISPRKGGFTSNDTWGGSKSY 92
Query: 2206 SETSSEQAAGSRDRVESQRKDVSQLNVQSTPANLETGVWNQLGKKAGQSSD-----IPSE 2042
S T+ E + D+ S + D ++ W Q +K Q S + SE
Sbjct: 93 SSTNRELSRNLSDKGFSSKGDDI-----GGGESVNENFWGQGREKQTQQSQSTNSTVISE 147
Query: 2041 TMPA-------SLPTGMVTQPV--VNETEKIWHYKDPSGKIQGPFSMAQLRKWSTTGYFP 1889
++P S P+ +VTQ VNE EKIWHY+DPSGKIQGPFSM QLRKWS TGYFP
Sbjct: 148 SVPGIALEISPSTPSTVVTQSASKVNEAEKIWHYQDPSGKIQGPFSMVQLRKWSNTGYFP 207
Query: 1888 EKLRIWKTSEKQDDSILLSDAMNGKFLKDPPPHEPQL--SVFSQSGRV-TSVTENRGNSA 1718
LRIW+ + +DDSILL++A++G F +DPP + + QS + +S T N +A
Sbjct: 208 VDLRIWRNTGTKDDSILLTEALSGNFQRDPPAVDNSFLKTQLVQSPHLPSSFTGNIAQAA 267
Query: 1717 PL-------WTDNRQTGRNL--RTPNDASPLATGNLEIAKSDKWASQPTIWSPS 1583
P+ TD +G NL TP +P + K + SQ WSP+
Sbjct: 268 PVPVEVPKYSTDRWDSGTNLPSPTPGQTTP------SLTKGQVFESQ---WSPT 312
>ref|XP_002886231.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata] gi|297332071|gb|EFH62490.1| zinc finger
(CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 672
Score = 144 bits (364), Expect = 8e-32
Identities = 115/323 (35%), Positives = 158/323 (48%), Gaps = 41/323 (12%)
Frame = -3
Query: 2374 DPHMDPGYESADE-EPDDKRRDTYLRSRESSSLRKAREAGYLGKGG-SSSSTWN-ERKVS 2204
DP MDP ES DE E ++K ++ LR R SS R+ R+ KGG SS+ +W S
Sbjct: 33 DPKMDPDCESEDEDEKEEKEKEKQLRPRSSSFNRRGRDPISPRKGGFSSNESWTGTSNYS 92
Query: 2203 ETSSEQ-------AAGSRDRVESQRKDVSQLNVQSTPANLETGVWNQLGKKAGQSSDIPS 2045
TS+ + GS R + +++ + E V LG + +S IP
Sbjct: 93 NTSANRELTRSYSGRGSTGRGDYLGSSDDKVSESMWTSARERDVQPSLGPEKPRSVSIPE 152
Query: 2044 ETMPAS------------------LPTGMVTQPVV--NETEKIWHYKDPSGKIQGPFSMA 1925
T +S P +V QPV NE+EKIWHYKDPSGK+QGPFSMA
Sbjct: 153 TTTRSSRAVAPPELSPRFASEISTAPPAVVPQPVPKSNESEKIWHYKDPSGKVQGPFSMA 212
Query: 1924 QLRKWSTTGYFPEKLRIWKTSEKQDDSILLSDAMNGKFLKDPPPHE---PQLSVFSQSGR 1754
QLRKW+ TGYFP KL IWK E DS+LL+DA+ G F K + + V + SG+
Sbjct: 213 QLRKWNNTGYFPAKLEIWKAKESALDSVLLTDALAGLFQKQTQAVDNSYTKAQVAAYSGQ 272
Query: 1753 VTSVTENRGNSAPLWTDNRQTGRNLR---TPNDASPLATGN---LEIAKSDKWASQ--PT 1598
+ N G++A + RN + + + + P T N AK + S+ PT
Sbjct: 273 SSQSEPNLGSTARTAPSTIEIPRNSQDTWSQSGSLPSPTPNQITTPTAKRRNFESRWSPT 332
Query: 1597 IWSPSSREASVNTSALSRQVQGH 1529
SP S S+N S +++ VQ H
Sbjct: 333 KPSPQSANQSMNYS-VAQSVQSH 354