BLASTX nr result

ID: Dioscorea21_contig00002649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002649
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284266.1| PREDICTED: 60S ribosomal protein L26-1 [Viti...   191   1e-46
ref|NP_001066165.1| Os12g0150100 [Oryza sativa Japonica Group] g...   180   3e-43
gb|AAX94834.1| ribosomal protein L24, putative [Oryza sativa Jap...   179   7e-43
emb|CBX25406.1| hypothetical_protein [Oryza brachyantha]              177   3e-42
ref|XP_003565134.1| PREDICTED: 60S ribosomal protein L26-1-like ...   176   5e-42

>ref|XP_002284266.1| PREDICTED: 60S ribosomal protein L26-1 [Vitis vinifera]
           gi|147769559|emb|CAN72392.1| hypothetical protein
           VITISV_032611 [Vitis vinifera]
           gi|147786955|emb|CAN73296.1| hypothetical protein
           VITISV_001956 [Vitis vinifera]
          Length = 151

 Score =  191 bits (485), Expect = 1e-46
 Identities = 102/151 (67%), Positives = 111/151 (73%)
 Frame = -1

Query: 738 MKYNPXXXXXXXXXXKAHFTAPSSVRRVLMSAPLSGDLRHKYNVRSVPIRKDDEIQVVRG 559
           MKYNP          KAHFTAPSSVRRVLMSAPLS DLR+KYNVRSVPIRKDDE+QVVRG
Sbjct: 1   MKYNPRVTSSRRKCRKAHFTAPSSVRRVLMSAPLSTDLRNKYNVRSVPIRKDDEVQVVRG 60

Query: 558 TFKGREGKVVQVYRRRWVIHVERITREKANGSTVNVGLDPSKVVITXXXXXXXXXXXXXX 379
           TFKGREGKVVQVYRR+WVIH+ERITREK NGSTVNVG++PSKVVI               
Sbjct: 61  TFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVINKLKLDKDRKSLLDR 120

Query: 378 XXXXXXXXXXXXKFSAEEVAAAGAPSLQEVD 286
                       KF+AE+VAAA APSLQE+D
Sbjct: 121 KAKGRAADKAKGKFTAEDVAAAAAPSLQEID 151


>ref|NP_001066165.1| Os12g0150100 [Oryza sativa Japonica Group] gi|315113264|pdb|3IZR|Y
           Chain Y, Localization Of The Large Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|77553015|gb|ABA95811.1| 60S
           ribosomal protein L26-1, putative, expressed [Oryza
           sativa Japonica Group] gi|113648672|dbj|BAF29184.1|
           Os12g0150100 [Oryza sativa Japonica Group]
           gi|125535782|gb|EAY82270.1| hypothetical protein
           OsI_37478 [Oryza sativa Indica Group]
           gi|125578511|gb|EAZ19657.1| hypothetical protein
           OsJ_35234 [Oryza sativa Japonica Group]
           gi|215740433|dbj|BAG97089.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|346703806|emb|CBX24474.1| hypothetical_protein [Oryza
           glaberrima]
          Length = 150

 Score =  180 bits (456), Expect = 3e-43
 Identities = 99/151 (65%), Positives = 109/151 (72%)
 Frame = -1

Query: 738 MKYNPXXXXXXXXXXKAHFTAPSSVRRVLMSAPLSGDLRHKYNVRSVPIRKDDEIQVVRG 559
           MK NP          KAHFTAPSSVRRVLMSA LS +LRHKYNVRS+PIRKDDE+QVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 558 TFKGREGKVVQVYRRRWVIHVERITREKANGSTVNVGLDPSKVVITXXXXXXXXXXXXXX 379
           ++KGREGKVVQVYRRRWVIHVERITREK NGSTVNVG+ PSKVV+T              
Sbjct: 61  SYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDR 120

Query: 378 XXXXXXXXXXXXKFSAEEVAAAGAPSLQEVD 286
                       KF+AE+VAAAGA SLQE+D
Sbjct: 121 KASGRAADKAKGKFTAEDVAAAGA-SLQEID 150


>gb|AAX94834.1| ribosomal protein L24, putative [Oryza sativa Japonica Group]
           gi|125533419|gb|EAY79967.1| hypothetical protein
           OsI_35131 [Oryza sativa Indica Group]
           gi|125576235|gb|EAZ17457.1| hypothetical protein
           OsJ_32984 [Oryza sativa Japonica Group]
           gi|346703425|emb|CBX25522.1| hypothetical_protein [Oryza
           glaberrima]
          Length = 153

 Score =  179 bits (453), Expect = 7e-43
 Identities = 98/153 (64%), Positives = 109/153 (71%), Gaps = 2/153 (1%)
 Frame = -1

Query: 738 MKYNPXXXXXXXXXXKAHFTAPSSVRRVLMSAPLSGDLRHKYNVRSVPIRKDDEIQVVRG 559
           MK NP          KAHFTAPSSVRRVLMSA LS +LRHKYNVRS+P+RKDDE+QVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPVRKDDEVQVVRG 60

Query: 558 TFKGREGKVVQVYRRRWVIHVERITREKANGSTVNVGLDPSKVVITXXXXXXXXXXXXXX 379
           ++KGREGKVVQVYRRRWVIHVERITREK NGSTVNVG+ PSKVV+T              
Sbjct: 61  SYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDR 120

Query: 378 XXXXXXXXXXXXKFSAEEVAAAGA--PSLQEVD 286
                       KF+AE+VAAAGA   SLQE+D
Sbjct: 121 KASGRAADKAKGKFTAEDVAAAGAAGASLQEID 153


>emb|CBX25406.1| hypothetical_protein [Oryza brachyantha]
          Length = 150

 Score =  177 bits (448), Expect = 3e-42
 Identities = 97/151 (64%), Positives = 108/151 (71%)
 Frame = -1

Query: 738 MKYNPXXXXXXXXXXKAHFTAPSSVRRVLMSAPLSGDLRHKYNVRSVPIRKDDEIQVVRG 559
           MK NP          KAHFTAPSSVRRVLMSA LS +LR KYNVRS+P+RKDDE+QVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSAELRSKYNVRSIPVRKDDEVQVVRG 60

Query: 558 TFKGREGKVVQVYRRRWVIHVERITREKANGSTVNVGLDPSKVVITXXXXXXXXXXXXXX 379
           ++KGREGKVVQVYRRRWVIHVERITREK NGSTVNVG+ PSKVV+T              
Sbjct: 61  SYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDR 120

Query: 378 XXXXXXXXXXXXKFSAEEVAAAGAPSLQEVD 286
                       KF+AE+VAAAGA SLQE+D
Sbjct: 121 KARGRAADKAKGKFTAEDVAAAGA-SLQEID 150


>ref|XP_003565134.1| PREDICTED: 60S ribosomal protein L26-1-like [Brachypodium
           distachyon]
          Length = 157

 Score =  176 bits (446), Expect = 5e-42
 Identities = 98/157 (62%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
 Frame = -1

Query: 738 MKYNPXXXXXXXXXXKAHFTAPSSVRRVLMSAPLSGDLRHKYNVRSVPIRKDDEIQVVRG 559
           MK NP          KAHFTAPSSVRRVLMSA LS +LRHKYNVRS+PIRKDDE+QVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 558 TFKGREGKVVQVYRRRWVIHVERITREKANGSTVNVGLDPSKVVITXXXXXXXXXXXXXX 379
           TFKGREGKVVQVYRRRWVIHVERITREK NGSTVNVG+ PSKVV+T              
Sbjct: 61  TFKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKALLDR 120

Query: 378 XXXXXXXXXXXXKFSAEEVAAAG------APSLQEVD 286
                       KF+A++VAAA         SLQE+D
Sbjct: 121 KARGRAADKAKGKFTADDVAAAAGGAAATGASLQEID 157


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