BLASTX nr result

ID: Dioscorea21_contig00002640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002640
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144196.1| PREDICTED: 60S ribosomal protein L17-2-like ...   136   3e-64
gb|ACF06589.1| ribosomal protein [Elaeis guineensis]                  143   8e-64
ref|XP_004135316.1| PREDICTED: 60S ribosomal protein L17-2-like ...   134   2e-63
gb|ADR71274.1| 60S ribosomal protein L17A [Hevea brasiliensis]        132   2e-62
emb|CAN74145.1| hypothetical protein VITISV_011749 [Vitis vinifera]   132   5e-62

>ref|XP_004144196.1| PREDICTED: 60S ribosomal protein L17-2-like [Cucumis sativus]
           gi|449489236|ref|XP_004158255.1| PREDICTED: 60S
           ribosomal protein L17-2-like [Cucumis sativus]
          Length = 183

 Score =  136 bits (342), Expect(2) = 3e-64
 Identities = 66/75 (88%), Positives = 70/75 (93%)
 Frame = -3

Query: 275 DVDTLFISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEESVRKEAETQLAT 96
           DVD L +SH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KE ETQLAT
Sbjct: 109 DVDLLHVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLAT 168

Query: 95  QKPKKGQALRSGASS 51
            KPKKGQA+RSGASS
Sbjct: 169 GKPKKGQAIRSGASS 183



 Score =  135 bits (339), Expect(2) = 3e-64
 Identities = 64/71 (90%), Positives = 67/71 (94%)
 Frame = -2

Query: 549 MVKYSKEPENPTKSAKAMGRDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVIAHKQAIPF 370
           MVKYS+EP+NPTKS KA G DLRVHFKNTRETAHAIRKLPLAKAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 369 TRFCGGVGRTA 337
            RFCGGVGRTA
Sbjct: 61  RRFCGGVGRTA 71


>gb|ACF06589.1| ribosomal protein [Elaeis guineensis]
          Length = 182

 Score =  143 bits (360), Expect(2) = 8e-64
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = -2

Query: 549 MVKYSKEPENPTKSAKAMGRDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVIAHKQAIPF 370
           MVKYSKEP+NPTKSAKAMGRDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVIAHKQAIPF
Sbjct: 1   MVKYSKEPDNPTKSAKAMGRDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVIAHKQAIPF 60

Query: 369 TRFCGGVGRTA 337
            RFCGGVGRTA
Sbjct: 61  RRFCGGVGRTA 71



 Score =  126 bits (317), Expect(2) = 8e-64
 Identities = 63/75 (84%), Positives = 70/75 (93%)
 Frame = -3

Query: 275 DVDTLFISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEESVRKEAETQLAT 96
           DVD+LFISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELIL+EKEE+V+KE ETQ+A 
Sbjct: 109 DVDSLFISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEEAVKKEPETQIAP 168

Query: 95  QKPKKGQALRSGASS 51
           +KPKK  ALR+G SS
Sbjct: 169 RKPKK-VALRTGTSS 182


>ref|XP_004135316.1| PREDICTED: 60S ribosomal protein L17-2-like [Cucumis sativus]
           gi|449494927|ref|XP_004159685.1| PREDICTED: 60S
           ribosomal protein L17-2-like [Cucumis sativus]
          Length = 183

 Score =  134 bits (337), Expect(2) = 2e-63
 Identities = 63/71 (88%), Positives = 67/71 (94%)
 Frame = -2

Query: 549 MVKYSKEPENPTKSAKAMGRDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVIAHKQAIPF 370
           MVKYS+EP+NPTKS KA G DLRVHFKNTRETAHA+RKLPLAKAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 369 TRFCGGVGRTA 337
            RFCGGVGRTA
Sbjct: 61  RRFCGGVGRTA 71



 Score =  134 bits (336), Expect(2) = 2e-63
 Identities = 66/75 (88%), Positives = 69/75 (92%)
 Frame = -3

Query: 275 DVDTLFISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEESVRKEAETQLAT 96
           DVD+L +SHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KE ETQLAT
Sbjct: 109 DVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLAT 168

Query: 95  QKPKKGQALRSGASS 51
            K KK QALRSGASS
Sbjct: 169 SKSKKSQALRSGASS 183


>gb|ADR71274.1| 60S ribosomal protein L17A [Hevea brasiliensis]
          Length = 183

 Score =  132 bits (333), Expect(2) = 2e-62
 Identities = 66/75 (88%), Positives = 68/75 (90%)
 Frame = -3

Query: 275 DVDTLFISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEESVRKEAETQLAT 96
           DVDTL ISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KE ETQLA 
Sbjct: 109 DVDTLVISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLAA 168

Query: 95  QKPKKGQALRSGASS 51
            K KK QA+RSGASS
Sbjct: 169 SKSKKSQAIRSGASS 183



 Score =  132 bits (331), Expect(2) = 2e-62
 Identities = 63/71 (88%), Positives = 66/71 (92%)
 Frame = -2

Query: 549 MVKYSKEPENPTKSAKAMGRDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVIAHKQAIPF 370
           MVKYS+EPEN TKS KA G DLRVHFKNTRETAHA+RKLPLAKAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSREPENATKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVMAHKQAIPF 60

Query: 369 TRFCGGVGRTA 337
            RFCGGVGRTA
Sbjct: 61  RRFCGGVGRTA 71


>emb|CAN74145.1| hypothetical protein VITISV_011749 [Vitis vinifera]
          Length = 183

 Score =  132 bits (333), Expect(2) = 5e-62
 Identities = 63/71 (88%), Positives = 66/71 (92%)
 Frame = -2

Query: 549 MVKYSKEPENPTKSAKAMGRDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVIAHKQAIPF 370
           MVKYS+EP+NPTKS KA G DLRVHFKNTRETAHAIRKLPLAKAKRYLEDV+ HKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLVHKQAIPF 60

Query: 369 TRFCGGVGRTA 337
           TRFC GVGRTA
Sbjct: 61  TRFCRGVGRTA 71



 Score =  130 bits (328), Expect(2) = 5e-62
 Identities = 64/75 (85%), Positives = 68/75 (90%)
 Frame = -3

Query: 275 DVDTLFISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEESVRKEAETQLAT 96
           DVD+L+ISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KE ETQLAT
Sbjct: 109 DVDSLYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLAT 168

Query: 95  QKPKKGQALRSGASS 51
            K KK  A+R GASS
Sbjct: 169 SKSKKSHAVRGGASS 183


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