BLASTX nr result

ID: Dioscorea21_contig00002637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002637
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD41906.2| OSJNBa0033G05.7 [Oryza sativa Japonica Group] gi...    78   7e-13
ref|NP_001054052.1| Os04g0643600 [Oryza sativa Japonica Group] g...    78   7e-13
ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ...    77   1e-12
ref|XP_003610314.1| CNGC5-like protein [Medicago truncatula] gi|...    77   1e-12
ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putativ...    76   3e-12

>emb|CAD41906.2| OSJNBa0033G05.7 [Oryza sativa Japonica Group]
           gi|90399281|emb|CAH68242.1| H0306F03.9 [Oryza sativa
           Indica Group] gi|125549951|gb|EAY95773.1| hypothetical
           protein OsI_17647 [Oryza sativa Indica Group]
           gi|125591828|gb|EAZ32178.1| hypothetical protein
           OsJ_16384 [Oryza sativa Japonica Group]
          Length = 724

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/67 (55%), Positives = 41/67 (61%)
 Frame = +3

Query: 3   LHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYTXXXXXXXXXXXXXXXXGDTAAGVSSSL 182
           LHSRQVQHTFRFYSQHWRTWAACFIQAAWRRY                   +++    SL
Sbjct: 620 LHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYYKRKMAEQHRKEEEAANRQSSSSHHPSL 679

Query: 183 GTTIFVS 203
             TI+ S
Sbjct: 680 AATIYAS 686


>ref|NP_001054052.1| Os04g0643600 [Oryza sativa Japonica Group]
           gi|113565623|dbj|BAF15966.1| Os04g0643600, partial
           [Oryza sativa Japonica Group]
          Length = 252

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/67 (55%), Positives = 41/67 (61%)
 Frame = +3

Query: 3   LHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYTXXXXXXXXXXXXXXXXGDTAAGVSSSL 182
           LHSRQVQHTFRFYSQHWRTWAACFIQAAWRRY                   +++    SL
Sbjct: 148 LHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYYKRKMAEQHRKEEEAANRQSSSSHHPSL 207

Query: 183 GTTIFVS 203
             TI+ S
Sbjct: 208 AATIYAS 214


>ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5-like
           [Glycine max]
          Length = 732

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/70 (57%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +3

Query: 3   LHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYTXXXXXXXXXXXXXXXXGDT---AAGVS 173
           LHSRQVQHTFRFYSQ WRTWAACFIQAAWRRY+                  T   A+G S
Sbjct: 624 LHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKTMELSQKDEPEESEGTRGNASGSS 683

Query: 174 SSLGTTIFVS 203
            SLG T   S
Sbjct: 684 YSLGATFLAS 693


>ref|XP_003610314.1| CNGC5-like protein [Medicago truncatula]
           gi|355511369|gb|AES92511.1| CNGC5-like protein [Medicago
           truncatula]
          Length = 731

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/68 (57%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +3

Query: 3   LHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYTXXXXXXXXXXXXXXXXG-DTAAGVSSS 179
           LHSRQVQHTFRFYSQ WRTWAACFIQAAWRRY                     A+G SSS
Sbjct: 625 LHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKKKIMKLRMKEEEADESHGNASGSSSS 684

Query: 180 LGTTIFVS 203
           LG  +  S
Sbjct: 685 LGAALLAS 692


>ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223531133|gb|EEF32981.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 735

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/70 (54%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +3

Query: 3   LHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYTXXXXXXXXXXXXXXXXGDT---AAGVS 173
           LHSRQVQHTFRFYSQ WRTWAACFIQAAWRRY+                 +T   A G S
Sbjct: 627 LHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKNMELRRKEEEDEVDETRSNAGGGS 686

Query: 174 SSLGTTIFVS 203
            S+G T   +
Sbjct: 687 YSIGATFLAT 696


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