BLASTX nr result

ID: Dioscorea21_contig00002622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002622
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA54136.1| TPA: hypothetical protein ZEAMMB73_631850 [Zea m...    78   8e-13
ref|XP_003566878.1| PREDICTED: rab proteins geranylgeranyltransf...    76   2e-12
gb|AFW79585.1| hypothetical protein ZEAMMB73_701794 [Zea mays]         74   2e-11
dbj|BAJ95024.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   2e-11
dbj|BAJ94316.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   2e-11

>tpg|DAA54136.1| TPA: hypothetical protein ZEAMMB73_631850 [Zea mays]
          Length = 555

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 35/70 (50%), Positives = 51/70 (72%)
 Frame = -1

Query: 269 SSNNGDPEPKPTLLWSCVYVQEISQASCDAAVCLCPTPDGNLDYRDILETTKKLYHSMYP 90
           ++N    + KPTL+WSC+YVQEI+Q +   ++  CP PD  LDYR++L +TKKL+ S+YP
Sbjct: 475 TTNESTEDVKPTLIWSCLYVQEITQGT-SGSLLSCPMPDEYLDYRNVLGSTKKLFASIYP 533

Query: 89  DEEFFMETSS 60
           DEEF  + S+
Sbjct: 534 DEEFLPKKSA 543


>ref|XP_003566878.1| PREDICTED: rab proteins geranylgeranyltransferase component A
           2-like [Brachypodium distachyon]
          Length = 552

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/71 (52%), Positives = 48/71 (67%)
 Frame = -1

Query: 272 TSSNNGDPEPKPTLLWSCVYVQEISQASCDAAVCLCPTPDGNLDYRDILETTKKLYHSMY 93
           T S N D + KP L+W CVYVQEI+Q +    V  CP PD +LD+R+ILE+TKKL+   Y
Sbjct: 472 TKSENND-DTKPALIWKCVYVQEITQGT-SGTVLSCPMPDEDLDFRNILESTKKLFADTY 529

Query: 92  PDEEFFMETSS 60
           P+EEF    S+
Sbjct: 530 PNEEFLPRNSA 540


>gb|AFW79585.1| hypothetical protein ZEAMMB73_701794 [Zea mays]
          Length = 506

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/70 (50%), Positives = 49/70 (70%)
 Frame = -1

Query: 269 SSNNGDPEPKPTLLWSCVYVQEISQASCDAAVCLCPTPDGNLDYRDILETTKKLYHSMYP 90
           +++    + KPTL+WSCVYVQEI+Q +    +  CP PD  LDYR+IL +TKKL+ S+Y 
Sbjct: 426 TASESTEDVKPTLIWSCVYVQEITQGTAGPLLS-CPMPDEYLDYRNILGSTKKLFASIYA 484

Query: 89  DEEFFMETSS 60
           DEEF  + S+
Sbjct: 485 DEEFLPKKSA 494


>dbj|BAJ95024.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 539

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = -1

Query: 272 TSSNNGDPEPKPTLLWSCVYVQEISQASCDAAVCLCPTPDGNLDYRDILETTKKLYHSMY 93
           T+S N + + KP L+WS VYVQEI+Q +    V  CP PD NLDYRDILE+TK+L+   Y
Sbjct: 459 TTSRNIE-DTKPALIWSYVYVQEITQGT-SGTVLSCPMPDENLDYRDILESTKQLFTDTY 516

Query: 92  PDEEF 78
           P+EEF
Sbjct: 517 PNEEF 521


>dbj|BAJ94316.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 560

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = -1

Query: 272 TSSNNGDPEPKPTLLWSCVYVQEISQASCDAAVCLCPTPDGNLDYRDILETTKKLYHSMY 93
           T+S N + + KP L+WS VYVQEI+Q +    V  CP PD NLDYRDILE+TK+L+   Y
Sbjct: 480 TTSRNIE-DTKPALIWSYVYVQEITQGT-SGTVLSCPMPDENLDYRDILESTKQLFTDTY 537

Query: 92  PDEEF 78
           P+EEF
Sbjct: 538 PNEEF 542


Top