BLASTX nr result

ID: Dioscorea21_contig00002610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002610
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFA36476.1| homocysteine S-methyltransferase-3, partial [Loli...    74   1e-11
gb|ACN40491.1| unknown [Picea sitchensis]                              74   1e-11
ref|XP_002517092.1| 5-methyltetrahydrofolate:homocysteine methyl...    74   2e-11
ref|NP_001067232.1| Os12g0607000 [Oryza sativa Japonica Group] g...    73   3e-11
ref|NP_001064628.1| Os10g0422200 [Oryza sativa Japonica Group] g...    73   3e-11

>gb|AFA36476.1| homocysteine S-methyltransferase-3, partial [Lolium perenne]
          Length = 191

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/54 (64%), Positives = 43/54 (79%)
 Frame = +3

Query: 3   STGVSDEGFVSYIKKWQEAGASLIGGCCRTTPDTIRAISRTLFQEHSTPETSIA 164
           STGVSD  FVSY+ +W + GA+LIGGCCRTTP+TIRAI+RTL Q    P+ S+A
Sbjct: 138 STGVSDGDFVSYVSEWCKDGAALIGGCCRTTPNTIRAITRTLNQFCPAPQLSVA 191


>gb|ACN40491.1| unknown [Picea sitchensis]
          Length = 348

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   STGVSDEGFVSYIKKWQEAGASLIGGCCRTTPDTIRAISRTL 128
           STGVSD  FVSY++KWQE GASLIGGCCRTTP+TI+AISR +
Sbjct: 292 STGVSDVDFVSYVQKWQEIGASLIGGCCRTTPNTIKAISRAM 333


>ref|XP_002517092.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
           [Ricinus communis] gi|223543727|gb|EEF45255.1|
           5-methyltetrahydrofolate:homocysteine methyltransferase,
           putative [Ricinus communis]
          Length = 348

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = +3

Query: 3   STGVSDEGFVSYIKKWQEAGASLIGGCCRTTPDTIRAISRTLFQEHSTP 149
           S G SDE FVSYI KW+EAGASL GGCCRTTP+TIRAI R +  + S P
Sbjct: 292 SCGASDEDFVSYIGKWREAGASLFGGCCRTTPNTIRAICRNISNKSSPP 340


>ref|NP_001067232.1| Os12g0607000 [Oryza sativa Japonica Group]
           gi|108862937|gb|ABA99257.2| Homocysteine
           S-methyltransferase 3, putative, expressed [Oryza sativa
           Japonica Group] gi|113649739|dbj|BAF30251.1|
           Os12g0607000 [Oryza sativa Japonica Group]
           gi|125580011|gb|EAZ21157.1| hypothetical protein
           OsJ_36805 [Oryza sativa Japonica Group]
           gi|385717680|gb|AFI71275.1| homocysteine
           S-methyltransferase 3 [Oryza sativa Japonica Group]
          Length = 342

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = +3

Query: 3   STGVSDEGFVSYIKKWQEAGASLIGGCCRTTPDTIRAISRTLFQEHSTPETSIA 164
           STGVSD  FVSY+ +W + GA LIGGCCRTTP+TI+AISR+L Q HS+    +A
Sbjct: 289 STGVSDGDFVSYVNEWCKDGAVLIGGCCRTTPNTIKAISRSLNQRHSSLHLPVA 342


>ref|NP_001064628.1| Os10g0422200 [Oryza sativa Japonica Group]
           gi|31432147|gb|AAP53817.1| Homocysteine
           S-methyltransferase 2, putative, expressed [Oryza sativa
           Japonica Group] gi|113639237|dbj|BAF26542.1|
           Os10g0422200 [Oryza sativa Japonica Group]
           gi|125531969|gb|EAY78534.1| hypothetical protein
           OsI_33628 [Oryza sativa Indica Group]
           gi|125574831|gb|EAZ16115.1| hypothetical protein
           OsJ_31561 [Oryza sativa Japonica Group]
           gi|215686685|dbj|BAG88938.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215716981|dbj|BAG95344.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737310|dbj|BAG96239.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 335

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = +3

Query: 6   TGVSDEGFVSYIKKWQEAGASLIGGCCRTTPDTIRAISRTL 128
           +G+S+E FVSY+KKW EAGASLIGGCCRT+PDTIR IS+ L
Sbjct: 292 SGISNEDFVSYVKKWHEAGASLIGGCCRTSPDTIRGISKAL 332


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