BLASTX nr result

ID: Dioscorea21_contig00002608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002608
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE47098.1| ABC transporter [Populus tremula x Populus tremu...   176   3e-42
gb|ABR17688.1| unknown [Picea sitchensis]                             174   1e-41
ref|XP_003549749.1| PREDICTED: ABC transporter F family member 4...   173   3e-41
tpg|DAA59776.1| TPA: hypothetical protein ZEAMMB73_569781 [Zea m...   172   6e-41
ref|XP_003629251.1| ABC transporter [Medicago truncatula] gi|355...   172   8e-41

>emb|CAE47098.1| ABC transporter [Populus tremula x Populus tremuloides]
          Length = 728

 Score =  176 bits (447), Expect = 3e-42
 Identities = 107/203 (52%), Positives = 123/203 (60%), Gaps = 8/203 (3%)
 Frame = -2

Query: 587 EKMSVSAMLASMDRXXXXXXXXXXXXXXXXXXXXXT---YTDGIXXXXXXXXXXXXXXXX 417
           EK+SV+AMLASMD+                     +   YTDGI                
Sbjct: 26  EKLSVTAMLASMDQKPDKPKKGSSSTVTSSKPKPKSAPSYTDGIDLPPSDDEEEPNGLEE 85

Query: 416 XXP-----KSRGGASSDLSNAAAVVSGKDVKKLEKKEVMAAHAREVARQEALRDDRDAFT 252
                   K      S+L      +S K++KK EKKE++AAHA E ARQEAL+DD DAFT
Sbjct: 86  EQQQNDPNKRPSQRRSELKPLDVAISDKELKKREKKELLAAHAIEHARQEALKDDHDAFT 145

Query: 251 VVLGTRVXXXXXXXXXXXDNVKDIVVENFSVSARGKELLKNTSVKISHGRRYGLVGPNGM 72
           VV+G+R             NVKDI +ENFSVSARGKELLKN SVKI+HGRRYGLVGPNGM
Sbjct: 146 VVIGSRASVLDGEDEGDA-NVKDITIENFSVSARGKELLKNASVKIAHGRRYGLVGPNGM 204

Query: 71  GKSTLLKLLAWRKIPVPRNIDVL 3
           GKSTLLKLLAWRKIPVP+NIDVL
Sbjct: 205 GKSTLLKLLAWRKIPVPKNIDVL 227


>gb|ABR17688.1| unknown [Picea sitchensis]
          Length = 717

 Score =  174 bits (442), Expect = 1e-41
 Identities = 105/196 (53%), Positives = 121/196 (61%), Gaps = 1/196 (0%)
 Frame = -2

Query: 587 EKMSVSAMLASMD-RXXXXXXXXXXXXXXXXXXXXXTYTDGIXXXXXXXXXXXXXXXXXX 411
           +KMSVS MLASMD +                      Y DG+                  
Sbjct: 28  KKMSVSQMLASMDHKPEKPKSAAGSKSKPKAPVGKSNYIDGLDLPPSDEEEESESEEAAK 87

Query: 410 PKSRGGASSDLSNAAAVVSGKDVKKLEKKEVMAAHAREVARQEALRDDRDAFTVVLGTRV 231
             SRG    D     A V+GK++KK EKK+ +AAHA E+AR EAL+DDRDAFTVV+G+R 
Sbjct: 88  A-SRGSDMKDSKLLEASVTGKELKKREKKDQLAAHAVEIARHEALKDDRDAFTVVIGSR- 145

Query: 230 XXXXXXXXXXXDNVKDIVVENFSVSARGKELLKNTSVKISHGRRYGLVGPNGMGKSTLLK 51
                       NVKDI V++FSVSARGKELLKN SVKISHG+RYGLVGPNG GKSTLLK
Sbjct: 146 SAVLDGDDTADANVKDIKVDSFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLK 205

Query: 50  LLAWRKIPVPRNIDVL 3
           LLAWRKIPVP+NIDVL
Sbjct: 206 LLAWRKIPVPKNIDVL 221


>ref|XP_003549749.1| PREDICTED: ABC transporter F family member 4-like [Glycine max]
          Length = 721

 Score =  173 bits (438), Expect = 3e-41
 Identities = 105/200 (52%), Positives = 121/200 (60%), Gaps = 5/200 (2%)
 Frame = -2

Query: 587 EKMSVSAMLASMDRXXXXXXXXXXXXXXXXXXXXXT---YTDGIXXXXXXXXXXXXXXXX 417
           EK+SVSAMLASMD                          YTDGI                
Sbjct: 26  EKISVSAMLASMDEKPDKPKKVPSSSSKPKPKSAPKASAYTDGIDLPPSDDEDDDDLLEE 85

Query: 416 XXPK--SRGGASSDLSNAAAVVSGKDVKKLEKKEVMAAHAREVARQEALRDDRDAFTVVL 243
              K  S+     DL      ++ K++KK EKK+++AAHA E A++EALRDD DAFTVV+
Sbjct: 86  GEAKRSSQQQQRVDLKPLDVPIADKELKKREKKDLLAAHAAEQAKKEALRDDHDAFTVVI 145

Query: 242 GTRVXXXXXXXXXXXDNVKDIVVENFSVSARGKELLKNTSVKISHGRRYGLVGPNGMGKS 63
           G+R             NVKDI VENFSVSARGKELLKN +VKISHG+RYGLVGPNG GKS
Sbjct: 146 GSRASVLDGGDDADA-NVKDITVENFSVSARGKELLKNATVKISHGKRYGLVGPNGKGKS 204

Query: 62  TLLKLLAWRKIPVPRNIDVL 3
           TLLKLLAWRKIPVP+NIDVL
Sbjct: 205 TLLKLLAWRKIPVPKNIDVL 224


>tpg|DAA59776.1| TPA: hypothetical protein ZEAMMB73_569781 [Zea mays]
          Length = 711

 Score =  172 bits (436), Expect = 6e-41
 Identities = 91/130 (70%), Positives = 105/130 (80%)
 Frame = -2

Query: 392 ASSDLSNAAAVVSGKDVKKLEKKEVMAAHAREVARQEALRDDRDAFTVVLGTRVXXXXXX 213
           A+ DLS A A  S KD KK +K+E +AA A E ARQEALRDDRDAF+VV+G RV      
Sbjct: 90  AAVDLS-AGAAPSHKDAKKKDKREAVAAAAAEAARQEALRDDRDAFSVVIGARVPGSSAA 148

Query: 212 XXXXXDNVKDIVVENFSVSARGKELLKNTSVKISHGRRYGLVGPNGMGKSTLLKLLAWRK 33
                DNV+D+V+ENFSVSARGKELLK+ S++ISHGRRYGLVGPNGMGKSTLLKLLAWR+
Sbjct: 149 DGTVDDNVRDVVLENFSVSARGKELLKSASLRISHGRRYGLVGPNGMGKSTLLKLLAWRQ 208

Query: 32  IPVPRNIDVL 3
           +PVPRNIDVL
Sbjct: 209 VPVPRNIDVL 218


>ref|XP_003629251.1| ABC transporter [Medicago truncatula] gi|355523273|gb|AET03727.1|
           ABC transporter [Medicago truncatula]
          Length = 766

 Score =  172 bits (435), Expect = 8e-41
 Identities = 103/196 (52%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
 Frame = -2

Query: 587 EKMSVSAMLASMD-RXXXXXXXXXXXXXXXXXXXXXTYTDGIXXXXXXXXXXXXXXXXXX 411
           EK SVSAMLA MD +                      YTD I                  
Sbjct: 79  EKFSVSAMLAGMDEKADKPKKASSNKAKPKPAPKASAYTDDIDLPPSDDDESEEEQEE-- 136

Query: 410 PKSRGGASSDLSNAAAVVSGKDVKKLEKKEVMAAHAREVARQEALRDDRDAFTVVLGTRV 231
            K R     DL      ++ K++KK EKK+++AAH  E A++EALRDDRDAFTVV+G+R 
Sbjct: 137 -KHR----PDLKPLEVSIAEKELKKREKKDILAAHVAEQAKKEALRDDRDAFTVVIGSRA 191

Query: 230 XXXXXXXXXXXDNVKDIVVENFSVSARGKELLKNTSVKISHGRRYGLVGPNGMGKSTLLK 51
                       NVKDI +ENFSV+ARGKELLKNTSVKISHG+RYGL+GPNGMGKSTLLK
Sbjct: 192 SVLDGDDGADA-NVKDITIENFSVAARGKELLKNTSVKISHGKRYGLIGPNGMGKSTLLK 250

Query: 50  LLAWRKIPVPRNIDVL 3
           LLAWRKIPVP+NIDVL
Sbjct: 251 LLAWRKIPVPKNIDVL 266


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