BLASTX nr result
ID: Dioscorea21_contig00002607
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00002607 (364 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527215.1| DNA binding protein, putative [Ricinus commu... 129 2e-28 ref|XP_002265108.2| PREDICTED: uncharacterized protein LOC100252... 127 1e-27 emb|CBI25715.3| unnamed protein product [Vitis vinifera] 127 1e-27 ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25 ref|XP_002878627.1| hypothetical protein ARALYDRAFT_343817 [Arab... 114 8e-24 >ref|XP_002527215.1| DNA binding protein, putative [Ricinus communis] gi|223533391|gb|EEF35141.1| DNA binding protein, putative [Ricinus communis] Length = 871 Score = 129 bits (325), Expect = 2e-28 Identities = 66/122 (54%), Positives = 85/122 (69%), Gaps = 3/122 (2%) Frame = -3 Query: 359 GFTETTKQWEDSYGLRYWRAGAMYKGSLPSALP---LFPDLSKHDXXXXXXXXXXXKCVN 189 GF+ TTKQWE+++G RYW+AGAMY+GS PS L L P++ + D + Sbjct: 264 GFSGTTKQWEETFGTRYWKAGAMYRGSGPSPLTITSLLPNILRKDVLAPNEIQKI---IQ 320 Query: 188 LPNVMVVEVLMEIVGIRNLPSTKKGNLFVTFSKKQPDMFLDGVSNLTIFSETGQKEVAGF 9 LP V +VEVL+EIVGI+NLP KG+LFVTFSKKQPD+F + LTI SE+G+K+VA F Sbjct: 321 LPEVKIVEVLLEIVGIKNLPEGLKGSLFVTFSKKQPDVFFNVKRKLTILSESGEKQVASF 380 Query: 8 QC 3 QC Sbjct: 381 QC 382 >ref|XP_002265108.2| PREDICTED: uncharacterized protein LOC100252003 [Vitis vinifera] Length = 825 Score = 127 bits (318), Expect = 1e-27 Identities = 63/119 (52%), Positives = 80/119 (67%) Frame = -3 Query: 359 GFTETTKQWEDSYGLRYWRAGAMYKGSLPSALPLFPDLSKHDXXXXXXXXXXXKCVNLPN 180 GF+ETTKQWE+++G RYWRAGAM++GS PS L P K + LP Sbjct: 265 GFSETTKQWEETFGSRYWRAGAMHRGSAPSPLTTTPYSPNMMTKKVVAPYDCQKIIQLPE 324 Query: 179 VMVVEVLMEIVGIRNLPSTKKGNLFVTFSKKQPDMFLDGVSNLTIFSETGQKEVAGFQC 3 V VVEVL+EIVG++NLP KG+L+V+FSK QPD + LTIFSE+G+K+VA FQC Sbjct: 325 VKVVEVLLEIVGVKNLPVGHKGSLYVSFSKTQPDTIFNAKRRLTIFSESGEKQVASFQC 383 >emb|CBI25715.3| unnamed protein product [Vitis vinifera] Length = 648 Score = 127 bits (318), Expect = 1e-27 Identities = 63/119 (52%), Positives = 80/119 (67%) Frame = -3 Query: 359 GFTETTKQWEDSYGLRYWRAGAMYKGSLPSALPLFPDLSKHDXXXXXXXXXXXKCVNLPN 180 GF+ETTKQWE+++G RYWRAGAM++GS PS L P K + LP Sbjct: 239 GFSETTKQWEETFGSRYWRAGAMHRGSAPSPLTTTPYSPNMMTKKVVAPYDCQKIIQLPE 298 Query: 179 VMVVEVLMEIVGIRNLPSTKKGNLFVTFSKKQPDMFLDGVSNLTIFSETGQKEVAGFQC 3 V VVEVL+EIVG++NLP KG+L+V+FSK QPD + LTIFSE+G+K+VA FQC Sbjct: 299 VKVVEVLLEIVGVKNLPVGHKGSLYVSFSKTQPDTIFNAKRRLTIFSESGEKQVASFQC 357 >ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|222868496|gb|EEF05627.1| predicted protein [Populus trichocarpa] Length = 789 Score = 119 bits (298), Expect = 3e-25 Identities = 60/119 (50%), Positives = 76/119 (63%) Frame = -3 Query: 359 GFTETTKQWEDSYGLRYWRAGAMYKGSLPSALPLFPDLSKHDXXXXXXXXXXXKCVNLPN 180 GF+ TT+ WE+++G RYW+AGAMY+GS PS L P S K + L Sbjct: 265 GFSGTTRHWEETFGRRYWKAGAMYRGSDPSPLTTIPFQSNILSKELEKSNQNKKMIELSE 324 Query: 179 VMVVEVLMEIVGIRNLPSTKKGNLFVTFSKKQPDMFLDGVSNLTIFSETGQKEVAGFQC 3 +VEVL+EIVG++NLP KGNLFV F+KKQPD+F + LTI SE+G K VA FQC Sbjct: 325 QKIVEVLLEIVGVKNLPERHKGNLFVMFNKKQPDVFYNVKRKLTILSESGDKHVASFQC 383 >ref|XP_002878627.1| hypothetical protein ARALYDRAFT_343817 [Arabidopsis lyrata subsp. lyrata] gi|297324466|gb|EFH54886.1| hypothetical protein ARALYDRAFT_343817 [Arabidopsis lyrata subsp. lyrata] Length = 920 Score = 114 bits (285), Expect = 8e-24 Identities = 56/120 (46%), Positives = 72/120 (60%) Frame = -3 Query: 362 TGFTETTKQWEDSYGLRYWRAGAMYKGSLPSALPLFPDLSKHDXXXXXXXXXXXKCVNLP 183 TGF++TT QWE +G RYW+AGAM++G P+ + PD S + P Sbjct: 340 TGFSKTTAQWEGMFGTRYWKAGAMHRGKTPAPVTTSPDASDVLVKVPTAKEDIQNLIQFP 399 Query: 182 NVMVVEVLMEIVGIRNLPSTKKGNLFVTFSKKQPDMFLDGVSNLTIFSETGQKEVAGFQC 3 V VVEVL+EI+GIRNLP KG + V FSK +PD + LTI SE G+K+VA FQC Sbjct: 400 EVEVVEVLLEIIGIRNLPDGHKGKISVMFSKTRPDSLFNAERRLTILSEVGEKQVATFQC 459