BLASTX nr result

ID: Dioscorea21_contig00002606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002606
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265108.2| PREDICTED: uncharacterized protein LOC100252...   125   5e-27
emb|CBI25715.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_002527215.1| DNA binding protein, putative [Ricinus commu...   124   6e-27
ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_004150648.1| PREDICTED: uncharacterized protein LOC101219...   111   5e-23

>ref|XP_002265108.2| PREDICTED: uncharacterized protein LOC100252003 [Vitis vinifera]
          Length = 825

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/119 (52%), Positives = 79/119 (66%)
 Frame = -2

Query: 359 GFTETTKQWEDSYGLRYWRAGAMYKGSLPSALPLFPDLSKHEXXXXXXXXXXXKCVNLPN 180
           GF+ETTKQWE+++G RYWRAGAM++GS PS L   P                 K + LP 
Sbjct: 265 GFSETTKQWEETFGSRYWRAGAMHRGSAPSPLTTTPYSPNMMTKKVVAPYDCQKIIQLPE 324

Query: 179 VMVVEVLMEIVGIRNLPSTKKGNRFVAFSKKQPDMFLDGVSNVTIFSETGQKQVAGFQC 3
           V VVEVL+EIVG++NLP   KG+ +V+FSK QPD   +    +TIFSE+G+KQVA FQC
Sbjct: 325 VKVVEVLLEIVGVKNLPVGHKGSLYVSFSKTQPDTIFNAKRRLTIFSESGEKQVASFQC 383


>emb|CBI25715.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/119 (52%), Positives = 79/119 (66%)
 Frame = -2

Query: 359 GFTETTKQWEDSYGLRYWRAGAMYKGSLPSALPLFPDLSKHEXXXXXXXXXXXKCVNLPN 180
           GF+ETTKQWE+++G RYWRAGAM++GS PS L   P                 K + LP 
Sbjct: 239 GFSETTKQWEETFGSRYWRAGAMHRGSAPSPLTTTPYSPNMMTKKVVAPYDCQKIIQLPE 298

Query: 179 VMVVEVLMEIVGIRNLPSTKKGNRFVAFSKKQPDMFLDGVSNVTIFSETGQKQVAGFQC 3
           V VVEVL+EIVG++NLP   KG+ +V+FSK QPD   +    +TIFSE+G+KQVA FQC
Sbjct: 299 VKVVEVLLEIVGVKNLPVGHKGSLYVSFSKTQPDTIFNAKRRLTIFSESGEKQVASFQC 357


>ref|XP_002527215.1| DNA binding protein, putative [Ricinus communis]
           gi|223533391|gb|EEF35141.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 871

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/119 (52%), Positives = 80/119 (67%)
 Frame = -2

Query: 359 GFTETTKQWEDSYGLRYWRAGAMYKGSLPSALPLFPDLSKHEXXXXXXXXXXXKCVNLPN 180
           GF+ TTKQWE+++G RYW+AGAMY+GS PS L +   L               K + LP 
Sbjct: 264 GFSGTTKQWEETFGTRYWKAGAMYRGSGPSPLTITSLLPNILRKDVLAPNEIQKIIQLPE 323

Query: 179 VMVVEVLMEIVGIRNLPSTKKGNRFVAFSKKQPDMFLDGVSNVTIFSETGQKQVAGFQC 3
           V +VEVL+EIVGI+NLP   KG+ FV FSKKQPD+F +    +TI SE+G+KQVA FQC
Sbjct: 324 VKIVEVLLEIVGIKNLPEGLKGSLFVTFSKKQPDVFFNVKRKLTILSESGEKQVASFQC 382


>ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|222868496|gb|EEF05627.1|
           predicted protein [Populus trichocarpa]
          Length = 789

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/119 (48%), Positives = 75/119 (63%)
 Frame = -2

Query: 359 GFTETTKQWEDSYGLRYWRAGAMYKGSLPSALPLFPDLSKHEXXXXXXXXXXXKCVNLPN 180
           GF+ TT+ WE+++G RYW+AGAMY+GS PS L   P  S              K + L  
Sbjct: 265 GFSGTTRHWEETFGRRYWKAGAMYRGSDPSPLTTIPFQSNILSKELEKSNQNKKMIELSE 324

Query: 179 VMVVEVLMEIVGIRNLPSTKKGNRFVAFSKKQPDMFLDGVSNVTIFSETGQKQVAGFQC 3
             +VEVL+EIVG++NLP   KGN FV F+KKQPD+F +    +TI SE+G K VA FQC
Sbjct: 325 QKIVEVLLEIVGVKNLPERHKGNLFVMFNKKQPDVFYNVKRKLTILSESGDKHVASFQC 383


>ref|XP_004150648.1| PREDICTED: uncharacterized protein LOC101219844 [Cucumis sativus]
          Length = 853

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
 Frame = -2

Query: 359 GFTETTKQWEDSYGLRYWRAGAMYKGSLPSALPLFPDLSKHEXXXXXXXXXXXKC---VN 189
           GF+ TTKQWED++G RYWRAG MY+G+ PS L L P  S               C   V+
Sbjct: 265 GFSGTTKQWEDTFGTRYWRAGVMYRGNCPSPLVLNP-YSASTNTIRDDVVSSQDCQNIVH 323

Query: 188 LPNVMVVEVLMEIVGIRNLPSTKKGNRFVAFSKKQPDMFLDGVSNVTIFSETGQKQVAGF 9
           LP +  VEVL+E V ++N+P   KGN FV F K QPD   +    ++I SETG KQVA F
Sbjct: 324 LPELKTVEVLLEFVEVKNIPEGLKGNLFVQFMKSQPDAIFNSKWKLSILSETGVKQVASF 383

Query: 8   QC 3
           QC
Sbjct: 384 QC 385


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