BLASTX nr result

ID: Dioscorea21_contig00002588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002588
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283240.1| PREDICTED: uncharacterized protein LOC100251...   301   1e-79
ref|XP_002521584.1| r3h domain containing protein, putative [Ric...   290   4e-76
ref|XP_002322608.1| predicted protein [Populus trichocarpa] gi|2...   283   4e-74
ref|XP_002307959.1| predicted protein [Populus trichocarpa] gi|2...   278   1e-72
ref|XP_002517274.1| r3h domain containing protein, putative [Ric...   278   1e-72

>ref|XP_002283240.1| PREDICTED: uncharacterized protein LOC100251643 [Vitis vinifera]
           gi|147820324|emb|CAN73572.1| hypothetical protein
           VITISV_007445 [Vitis vinifera]
           gi|297741684|emb|CBI32816.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score =  301 bits (772), Expect = 1e-79
 Identities = 161/287 (56%), Positives = 199/287 (69%), Gaps = 9/287 (3%)
 Frame = -3

Query: 918 SYLRCAAHRVAQYYGLQTXXXXXXXXXXXNRILAMKTPESRFPSVHLSDIPTKQAETENI 739
           SYLR AAHRVA +YGLQT           NRI+ MKT ESR P++ LS+IP KQ+E E  
Sbjct: 65  SYLRLAAHRVALHYGLQTMVQDNSVDGLANRIVVMKTAESRCPAICLSEIPAKQSENEKP 124

Query: 738 GHVKIAIKARPNKASSGDGVDLEAKKSQVRTVEERKEEYDKARARIFSRSSSPEVEGSCM 559
            H+KIAI+ RPNK S  +  +   K+S VRTVEERKEEYDKARARIFS  +SP+ + +  
Sbjct: 125 EHIKIAIRRRPNKTSLNETNETGIKRSSVRTVEERKEEYDKARARIFSTPASPDSDDTLP 184

Query: 558 VAAEDG-NIYAIADEQENCR-TWADEGEKASPKDG--ASRVAIFRDKEKDRNDPDYDRSY 391
            A  DG N+    DE E CR + AD  +  S +D   +SRVAIFRD+EKDR DPDYDRSY
Sbjct: 185 QAPADGKNLCLNGDENEGCRNSMADPEKNISIRDSGTSSRVAIFRDREKDRTDPDYDRSY 244

Query: 390 DRYARSLSFSPTFGVGACNV--VQSPLMPYEAGFP---QVPRVQSSMSFSQANPVMGPFC 226
           +RY R+L  + +F +   +   +Q P + Y+ GFP   Q+ R Q+S+S+  +NP+M PFC
Sbjct: 245 ERYVRNLPTNQSFSLAPFDAQKIQHPFLQYDTGFPQLGQIQRTQASLSYRPSNPIMNPFC 304

Query: 225 AFGSNQTSRDAVYMQWPSTAMFYAHSYEHFRHAVFQAPFYQQPLSFD 85
           A G NQTSRDAVY+QWPS +M YAHSYE FRHAVFQAPF QQPLSFD
Sbjct: 305 AMGLNQTSRDAVYLQWPSHSMMYAHSYEQFRHAVFQAPFCQQPLSFD 351


>ref|XP_002521584.1| r3h domain containing protein, putative [Ricinus communis]
           gi|223539262|gb|EEF40855.1| r3h domain containing
           protein, putative [Ricinus communis]
          Length = 349

 Score =  290 bits (741), Expect = 4e-76
 Identities = 159/287 (55%), Positives = 197/287 (68%), Gaps = 9/287 (3%)
 Frame = -3

Query: 918 SYLRCAAHRVAQYYGLQTXXXXXXXXXXXNRILAMKTPESRFPSVHLSDIPTKQAETENI 739
           SYLR AAHRVAQ+YGL T           N+IL  KT E R+P+V L +IP KQ E++  
Sbjct: 58  SYLRLAAHRVAQHYGLITMVQDNSFDGLVNKILVKKTAEIRYPAVRLCEIPAKQWESDKS 117

Query: 738 GHVKIAIKARPNKASSGDGVDLEAKKSQVRTVEERKEEYDKARARIFSRSSSPEVEGSCM 559
             VKI I+ RPNK S+ +  +   K+  VR+VEERKEEYD+ARARIFS  SS  ++    
Sbjct: 118 EQVKIVIRPRPNKGSTNEFNEFGVKQDPVRSVEERKEEYDRARARIFSSPSSTNLDDVVS 177

Query: 558 VAAED-GNIYAIADEQENCRTWADEGEK-ASPKDGA-SRVAIFRDKEKDRNDPDYDRSYD 388
             + D  +     DE ENCR  A++ EK  +P+DGA SRVAIFRD+EKDR DPDYDRSYD
Sbjct: 178 QGSIDRKSTNPSKDELENCRYSANDPEKNINPRDGAPSRVAIFRDREKDRTDPDYDRSYD 237

Query: 387 RYARSLSFSPTFGVGACNV--VQSPLMPYEAGFP---QVPRVQSSMSFS-QANPVMGPFC 226
           RY RSL  + +F +   N+  +Q P +PY+ GFP   Q+PR Q+S+S+   A+PVM PFC
Sbjct: 238 RYIRSLPTNQSFNLAPLNMQKIQLPFIPYDTGFPQLGQMPRTQNSLSYQPAASPVMSPFC 297

Query: 225 AFGSNQTSRDAVYMQWPSTAMFYAHSYEHFRHAVFQAPFYQQPLSFD 85
           A GSNQTSRD  Y+QWPS +M YAHSYE FRHAVFQAPF QQPLSF+
Sbjct: 298 AVGSNQTSRDPAYVQWPSASMMYAHSYEQFRHAVFQAPFCQQPLSFE 344


>ref|XP_002322608.1| predicted protein [Populus trichocarpa] gi|222867238|gb|EEF04369.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  283 bits (724), Expect = 4e-74
 Identities = 155/287 (54%), Positives = 192/287 (66%), Gaps = 9/287 (3%)
 Frame = -3

Query: 918 SYLRCAAHRVAQYYGLQTXXXXXXXXXXXNRILAMKTPESRFPSVHLSDIPTKQAETENI 739
           SYLR AAHRVAQ+YGL T           N+IL  KT E R+P+V LS+IP KQ+ ++  
Sbjct: 63  SYLRLAAHRVAQHYGLITMVQDNGIDGLLNKILVQKTAECRYPAVRLSEIPAKQSGSDTP 122

Query: 738 GHVKIAIKARPNKASSGDGVDLEAKKSQVRTVEERKEEYDKARARIFSRSSSPEVEGSC- 562
             +K+AI+ RPNK S  D      K+S VR+VEERKEEYD+ARARIFS  SSP  + +  
Sbjct: 123 EMIKLAIRPRPNKGSINDPNGFGIKRSPVRSVEERKEEYDRARARIFSSPSSPTADDTVP 182

Query: 561 MVAAEDGNIYAIADEQENCRTWADEGEK-ASPKDG-ASRVAIFRDKEKDRNDPDYDRSYD 388
            +  +  N+ +  DE E CR    + EK    +DG +SRVAIFRD+EKDR DPDYDRSY+
Sbjct: 183 QLPTDSKNLSSSKDENEECRISVVDPEKNVFVRDGMSSRVAIFRDREKDRTDPDYDRSYE 242

Query: 387 RYARSLSFSPTFGVGACNV--VQSPLMPYEAGFP---QVPRVQSSMSF-SQANPVMGPFC 226
           RY RSL  + +F +   N+  +  P M Y+  FP   Q+PR Q+S+ +   ANP M PFC
Sbjct: 243 RYVRSLPANQSFSLTPFNMQKIPIPYMQYDPSFPQLGQMPRTQASLGYHPAANPAMSPFC 302

Query: 225 AFGSNQTSRDAVYMQWPSTAMFYAHSYEHFRHAVFQAPFYQQPLSFD 85
           A GSNQTSRDA Y+QWPSTAM YAHSY+ FRHA FQAPF QQPLSFD
Sbjct: 303 AMGSNQTSRDAAYVQWPSTAMMYAHSYDQFRHATFQAPFCQQPLSFD 349


>ref|XP_002307959.1| predicted protein [Populus trichocarpa] gi|222853935|gb|EEE91482.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  278 bits (712), Expect = 1e-72
 Identities = 155/287 (54%), Positives = 189/287 (65%), Gaps = 9/287 (3%)
 Frame = -3

Query: 918 SYLRCAAHRVAQYYGLQTXXXXXXXXXXXNRILAMKTPESRFPSVHLSDIPTKQAETENI 739
           SYLR AAHRVA +YGL T           N+IL  KT +SR+P+V L+ IP KQ E++  
Sbjct: 63  SYLRLAAHRVAHHYGLITMVQDNGIDGLGNKILVQKTAQSRYPAVCLTAIPAKQLESDKP 122

Query: 738 GHVKIAIKARPNKASSGDGVDLEAKKSQVRTVEERKEEYDKARARIFSRSSSPEVEGSCM 559
             +K+AI+ RPNK S  D      K++ VR+VEERKE+YD+ARARIFS  SSP  E +  
Sbjct: 123 EKIKLAIRPRPNKGSINDPNGFGVKRNPVRSVEERKEDYDRARARIFSSPSSPTAEDTVP 182

Query: 558 VAAEDG-NIYAIADEQENCRTWADEGEK-ASPKDG-ASRVAIFRDKEKDRNDPDYDRSYD 388
               D  N+ +  DE E  R    + EK    +D  +SRVAIFRD+EKDR DPDYDRSYD
Sbjct: 183 ELPTDSKNLSSSKDENEESRNSVVDPEKNVFIRDSMSSRVAIFRDREKDRTDPDYDRSYD 242

Query: 387 RYARSLSFSPTFGVGACNV--VQSPLMPYEAGFP---QVPRVQSSMSFS-QANPVMGPFC 226
           RY RSL  + +F +   N+  +  P M Y+AGFP   Q+PR Q+S+ +   A PVM PFC
Sbjct: 243 RYVRSLPANQSFSLTPFNMQKIPHPFMQYDAGFPQMGQMPRTQASLGYQPAAGPVMSPFC 302

Query: 225 AFGSNQTSRDAVYMQWPSTAMFYAHSYEHFRHAVFQAPFYQQPLSFD 85
           A GSNQTSRDA Y+QWPS AM YAHSYE FRHA FQAPF QQPLSFD
Sbjct: 303 ALGSNQTSRDAAYVQWPSAAMMYAHSYEQFRHAAFQAPFCQQPLSFD 349


>ref|XP_002517274.1| r3h domain containing protein, putative [Ricinus communis]
           gi|223543537|gb|EEF45067.1| r3h domain containing
           protein, putative [Ricinus communis]
          Length = 350

 Score =  278 bits (711), Expect = 1e-72
 Identities = 159/286 (55%), Positives = 190/286 (66%), Gaps = 9/286 (3%)
 Frame = -3

Query: 918 SYLRCAAHRVAQYYGLQTXXXXXXXXXXXNRILAMKTPESRFPSVHLSDIPTKQAETENI 739
           SYLR AAHRVAQ+YGL T           N+IL  KT ESR+P+V L +IP KQ E +  
Sbjct: 60  SYLRLAAHRVAQHYGLITMVQDYGYDGLVNKILVKKTAESRYPAVCLCEIPAKQLERDKP 119

Query: 738 GHVKIAIKARPNKASSGDGVDLEAKKSQVRTVEERKEEYDKARARIFSRSSSPEVEGSCM 559
             VKI I+ RPNK S  +  +   K+S VR+VEERKEEYD+ARARIFS   SP  +    
Sbjct: 120 EQVKIVIRPRPNKGSINECNEFGVKQSPVRSVEERKEEYDRARARIFSSPCSPSSDDIVS 179

Query: 558 VAAEDGNIYAIA-DEQENCRTWADEGEK-ASPKDGAS-RVAIFRDKEKDRNDPDYDRSYD 388
            A+ DG   + + DE E CR  A + EK   P+DGA+ RVAIFRD+EKDR DPDYDRSYD
Sbjct: 180 HASIDGKSTSPSEDENEGCRNSASDPEKNIYPRDGAAPRVAIFRDREKDRTDPDYDRSYD 239

Query: 387 RYARSLSFSPTFGVGACNV--VQSPLMPYEAGFP---QVPRVQSSMSFS-QANPVMGPFC 226
           RY RSL F+  F +   N+  +Q P + Y+ GFP   Q+PR Q+++S    ANPVM PF 
Sbjct: 240 RY-RSLPFNQGFNMAPFNLQKIQLPYVQYDTGFPQLGQMPRTQNALSHQPAANPVMSPFG 298

Query: 225 AFGSNQTSRDAVYMQWPSTAMFYAHSYEHFRHAVFQAPFYQQPLSF 88
           A GSNQ  RD  Y+QWPSTAM Y HSYE FRHAVFQAPF QQPLSF
Sbjct: 299 AMGSNQAPRDTAYVQWPSTAMMYTHSYEQFRHAVFQAPFSQQPLSF 344


Top