BLASTX nr result

ID: Dioscorea21_contig00002581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002581
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris...   150   1e-34
gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris...   150   1e-34
emb|CBI40043.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8...   140   1e-31
gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardeni...   135   3e-30

>gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/103 (72%), Positives = 80/103 (77%)
 Frame = +3

Query: 123 TQALLSSMEAGRQLLGGRPLHXXXXXXXXXXXXXXXXXXXXXXTPPVKQGADRQLWFASK 302
           TQALLSSMEAGRQLLGGRP+                       TPPVKQGADRQLWFASK
Sbjct: 4   TQALLSSMEAGRQLLGGRPVQWTPTRSFSSSRKASFVVKAAS-TPPVKQGADRQLWFASK 62

Query: 303 QSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVIN 431
           QSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE+IN
Sbjct: 63  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEIIN 105


>gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/103 (72%), Positives = 80/103 (77%)
 Frame = +3

Query: 123 TQALLSSMEAGRQLLGGRPLHXXXXXXXXXXXXXXXXXXXXXXTPPVKQGADRQLWFASK 302
           TQALLSSMEAGRQLLGGRP+                       TPPVKQGADRQLWFASK
Sbjct: 4   TQALLSSMEAGRQLLGGRPVQWTPSRSFSSSRKASFVVKAAS-TPPVKQGADRQLWFASK 62

Query: 303 QSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVIN 431
           QSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE+IN
Sbjct: 63  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEIIN 105


>emb|CBI40043.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/107 (65%), Positives = 77/107 (71%)
 Frame = +3

Query: 111 ESMATQALLSSMEAGRQLLGGRPLHXXXXXXXXXXXXXXXXXXXXXXTPPVKQGADRQLW 290
           +++ + +L SS+E  RQ+LG RPL                       TPPVKQGADR LW
Sbjct: 4   QALVSSSLTSSVETARQILGSRPLQSPSRKSSSFVVRAAS-------TPPVKQGADRPLW 56

Query: 291 FASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVIN 431
           FASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVIN
Sbjct: 57  FASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVIN 103


>ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis
           vinifera]
          Length = 274

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/107 (65%), Positives = 77/107 (71%)
 Frame = +3

Query: 111 ESMATQALLSSMEAGRQLLGGRPLHXXXXXXXXXXXXXXXXXXXXXXTPPVKQGADRQLW 290
           +++ + +L SS+E  RQ+LG RPL                       TPPVKQGADR LW
Sbjct: 4   QALVSSSLTSSVETARQILGSRPLQSPSRKSSSFVVRAAS-------TPPVKQGADRPLW 56

Query: 291 FASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVIN 431
           FASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVIN
Sbjct: 57  FASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVIN 103


>gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardenia jasminoides]
          Length = 274

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/111 (64%), Positives = 76/111 (68%), Gaps = 6/111 (5%)
 Frame = +3

Query: 117 MATQALLSSM------EAGRQLLGGRPLHXXXXXXXXXXXXXXXXXXXXXXTPPVKQGAD 278
           MATQAL+SS       EA RQ+LGGR                         TPP KQGAD
Sbjct: 1   MATQALVSSSSITASAEAARQILGGRSFQSSSSRKVSFAVRAEA-------TPPAKQGAD 53

Query: 279 RQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVIN 431
           RQLWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEP WLAYGE+IN
Sbjct: 54  RQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPSWLAYGEIIN 104


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