BLASTX nr result
ID: Dioscorea21_contig00002533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00002533
(688 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza... 196 2e-61
ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group] g... 196 2e-61
dbj|BAJ87816.1| predicted protein [Hordeum vulgare subsp. vulgare] 187 3e-61
emb|CBI16098.3| unnamed protein product [Vitis vinifera] 193 4e-60
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 192 5e-60
>gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza sativa]
Length = 386
Score = 196 bits (497), Expect(2) = 2e-61
Identities = 91/141 (64%), Positives = 100/141 (70%)
Frame = +3
Query: 264 AIESMPTIEIADGHVILESHCAVCKEAFEIGDDAREMPCKHIYHQDCILPWLSLRNSCPV 443
++ESMPT+ IA HV +SHCAVCKE FE+GD+AREMPC HIYHQDCILPWL+LRNSCPV
Sbjct: 176 SVESMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPV 235
Query: 444 CRHEMPTEVGRRMXXXXXXXXXAVGLTIWRLPXXXXXXXXXXXXXXXXERELPVVYTEMD 623
CRHEMPT+ R VGLTIWRLP ERELPVVYTEMD
Sbjct: 236 CRHEMPTDAARPRPSNAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMD 295
Query: 624 GGFNTGGAPRRVLWASRGSRS 686
GGFN GGAPRR+ W SR SRS
Sbjct: 296 GGFNNGGAPRRISWGSRQSRS 316
Score = 66.6 bits (161), Expect(2) = 2e-61
Identities = 34/50 (68%), Positives = 36/50 (72%)
Frame = +1
Query: 1 GTGSGLRPMPSGVSDFLMGSGLERLLDQLAQFGISGFASGRGCENPPASK 150
G GSGLRP+P +SDFLMGSG ERLLDQL Q G A R ENPPASK
Sbjct: 127 GAGSGLRPLPETMSDFLMGSGFERLLDQLTQIEAGGLARAR--ENPPASK 174
>ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group]
gi|52353630|gb|AAU44196.1| putative ring-H2 finger
protein [Oryza sativa Japonica Group]
gi|255675945|dbj|BAF16351.2| Os05g0110000 [Oryza sativa
Japonica Group]
Length = 333
Score = 196 bits (497), Expect(2) = 2e-61
Identities = 91/141 (64%), Positives = 100/141 (70%)
Frame = +3
Query: 264 AIESMPTIEIADGHVILESHCAVCKEAFEIGDDAREMPCKHIYHQDCILPWLSLRNSCPV 443
++ESMPT+ IA HV +SHCAVCKE FE+GD+AREMPC HIYHQDCILPWL+LRNSCPV
Sbjct: 123 SVESMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPV 182
Query: 444 CRHEMPTEVGRRMXXXXXXXXXAVGLTIWRLPXXXXXXXXXXXXXXXXERELPVVYTEMD 623
CRHEMPT+ R VGLTIWRLP ERELPVVYTEMD
Sbjct: 183 CRHEMPTDAARPRPSNAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMD 242
Query: 624 GGFNTGGAPRRVLWASRGSRS 686
GGFN GGAPRR+ W SR SRS
Sbjct: 243 GGFNNGGAPRRISWGSRQSRS 263
Score = 66.6 bits (161), Expect(2) = 2e-61
Identities = 34/50 (68%), Positives = 36/50 (72%)
Frame = +1
Query: 1 GTGSGLRPMPSGVSDFLMGSGLERLLDQLAQFGISGFASGRGCENPPASK 150
G GSGLRP+P +SDFLMGSG ERLLDQL Q G A R ENPPASK
Sbjct: 74 GAGSGLRPLPETMSDFLMGSGFERLLDQLTQIEAGGLARAR--ENPPASK 121
>dbj|BAJ87816.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 187 bits (475), Expect(2) = 3e-61
Identities = 91/157 (57%), Positives = 104/157 (66%), Gaps = 16/157 (10%)
Frame = +3
Query: 264 AIESMPTIEIADGHVILESHCAVCKEAFEIGDDAREMPCKHIYHQDCILPWLSLRNSCPV 443
A+ESMPT+ +A HV +SHCAVCKEAFE+GD+AREMPC H+YHQDCILPWL+LRNSCPV
Sbjct: 178 AVESMPTVVVAACHVGADSHCAVCKEAFELGDEAREMPCSHMYHQDCILPWLALRNSCPV 237
Query: 444 CRHEMPTEVGRRM----------------XXXXXXXXXAVGLTIWRLPXXXXXXXXXXXX 575
CRHE+PT+V R VGLTIWRLP
Sbjct: 238 CRHELPTDVPRSAPAGDLGAADDQGSNTGAEAGSEEETTVGLTIWRLPGGGFAVGRFAGG 297
Query: 576 XXXXERELPVVYTEMDGGFNTGGAPRRVLWASRGSRS 686
ERELPVVYTE+DGGFN GGAPRR+ W+SRGSRS
Sbjct: 298 RRAGERELPVVYTEVDGGFNNGGAPRRISWSSRGSRS 334
Score = 74.3 bits (181), Expect(2) = 3e-61
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +1
Query: 1 GTGSGLRPMPSGVSDFLMGSGLERLLDQLAQFGISGFASGRGCENPPASK 150
G GSGLRP+P +SDFLMGSG ERLL+QLAQ GF + R C+NPPASK
Sbjct: 127 GAGSGLRPLPESMSDFLMGSGFERLLEQLAQIEAGGFGAVRPCDNPPASK 176
>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 193 bits (490), Expect(2) = 4e-60
Identities = 93/142 (65%), Positives = 102/142 (71%), Gaps = 1/142 (0%)
Frame = +3
Query: 264 AIESMPTIEIADGHVILESHCAVCKEAFEIGDDAREMPCKHIYHQDCILPWLSLRNSCPV 443
A+ESMPTIEI H++ E HCAVCKEAF++G +AREMPCKHIYH DCILPWLSLRNSCPV
Sbjct: 284 AVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPV 343
Query: 444 CRHEMPTEV-GRRMXXXXXXXXXAVGLTIWRLPXXXXXXXXXXXXXXXXERELPVVYTEM 620
CRHE+PT+V G R VGLTIWRLP ERELPVVYTEM
Sbjct: 344 CRHELPTDVPGTR-------NSPTVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEM 396
Query: 621 DGGFNTGGAPRRVLWASRGSRS 686
DGGFN GAPRR+ WASR SRS
Sbjct: 397 DGGFNNSGAPRRISWASRRSRS 418
Score = 64.7 bits (156), Expect(2) = 4e-60
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +1
Query: 1 GTGSGLRPMPSGVSDFLMGSGLERLLDQLAQFGISGFASGRGCENPPASK 150
G GSGLRP+P+ +S+FLMGSG +RLL+QL+Q I+GF GRG E+PPASK
Sbjct: 236 GAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGF--GRG-EHPPASK 282
>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 388
Score = 192 bits (489), Expect(2) = 5e-60
Identities = 92/150 (61%), Positives = 101/150 (67%), Gaps = 9/150 (6%)
Frame = +3
Query: 264 AIESMPTIEIADGHVILESHCAVCKEAFEIGDDAREMPCKHIYHQDCILPWLSLRNSCPV 443
A+ESMPTIEI H++ E HCAVCKEAF++G +AREMPCKHIYH DCILPWLSLRNSCPV
Sbjct: 168 AVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPV 227
Query: 444 CRHEMPTEV---------GRRMXXXXXXXXXAVGLTIWRLPXXXXXXXXXXXXXXXXERE 596
CRHE+PT+V G VGLTIWRLP ERE
Sbjct: 228 CRHELPTDVPGTRNSPVSGNEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERE 287
Query: 597 LPVVYTEMDGGFNTGGAPRRVLWASRGSRS 686
LPVVYTEMDGGFN GAPRR+ WASR SRS
Sbjct: 288 LPVVYTEMDGGFNNSGAPRRISWASRRSRS 317
Score = 64.7 bits (156), Expect(2) = 5e-60
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +1
Query: 1 GTGSGLRPMPSGVSDFLMGSGLERLLDQLAQFGISGFASGRGCENPPASK 150
G GSGLRP+P+ +S+FLMGSG +RLL+QL+Q I+GF GRG E+PPASK
Sbjct: 120 GAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGF--GRG-EHPPASK 166