BLASTX nr result

ID: Dioscorea21_contig00002516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00002516
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteo...   414   e-113
ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteo...   413   e-113
ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteo...   413   e-113
ref|XP_002313173.1| predicted protein [Populus trichocarpa] gi|2...   406   e-111
gb|ACU20022.1| unknown [Glycine max]                                  399   e-109

>ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 1, chloroplastic-like [Glycine max]
          Length = 372

 Score =  414 bits (1063), Expect = e-113
 Identities = 223/346 (64%), Positives = 255/346 (73%), Gaps = 1/346 (0%)
 Frame = +3

Query: 9    RKKSIRRCISASASTNDFEHIPRQFREENLKDGLMDNYKNAPSCLYGLSASQMDMFMTED 188
            R+ + RR  S+SA  +  +HIP+QFR+ENLKDGLM+NYKNAP  LYGLS SQMDMFMTED
Sbjct: 30   RRVAPRRFNSSSAKCS-LDHIPKQFRKENLKDGLMENYKNAPQSLYGLSPSQMDMFMTED 88

Query: 189  NPYRRQADQVTEESISSTRNYVDNGGMYSLSGTTNA-SSKCSMSVSMXXXXXXXXXXXXX 365
            NP R+Q+++VTEESISS +NY+DNGGM+SLSG   + +SK SMSVSM             
Sbjct: 89   NPIRQQSERVTEESISSAKNYMDNGGMWSLSGMGKSDASKYSMSVSMYRGGRGTGRPKTA 148

Query: 366  XXXXXXXXXXXARICYLGMPIVPAVTELVVAQLMWLDYDNPSKPIYLYINSSGTQNEKME 545
                       ARICYLGMPIVPAVTEL+VAQ MWLDYDNPSKPIYLYINSSGT NEK E
Sbjct: 149  PPDLPSLLLD-ARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGTLNEKNE 207

Query: 546  TVGSETEAYAIADTLAYCKSKIYTVNCGMAYGQAAMLLSLGAKGYRALQPNASTKLYLPK 725
            TVGSETEAY+IAD ++Y K+ +YTVNCGMA+GQAAMLLSLG KGYRA+QPN+STKLYLPK
Sbjct: 208  TVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKLYLPK 267

Query: 726  VNRSSGSVIDMWIKAKELDANTDYYIELLAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 905
            VNRSSG+VIDMWIKAKEL+ANT+YYIELLAKG                            
Sbjct: 268  VNRSSGAVIDMWIKAKELEANTEYYIELLAKG-TGKSKEEIAKDVQRPKYLQAQDAIDYG 326

Query: 906  XXXXXXXXDSRDVAYEKRDYDGMLAQSKATRRQPGGGTQAAPSGFR 1043
                     SRDVA+EKR+YD MLAQS+A RRQ GG  QAAPSGFR
Sbjct: 327  IADKIIDSSSRDVAFEKRNYDEMLAQSRAMRRQGGGNPQAAPSGFR 372


>ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 1, chloroplastic [Vitis vinifera]
            gi|296083061|emb|CBI22465.3| unnamed protein product
            [Vitis vinifera]
          Length = 388

 Score =  413 bits (1062), Expect = e-113
 Identities = 219/348 (62%), Positives = 249/348 (71%), Gaps = 1/348 (0%)
 Frame = +3

Query: 3    QLRKKSIRRCISASASTNDFEHIPRQFREENLKDGLMDNYKNAPSCLYGLSASQMDMFMT 182
            +L + ++RR   + ++   F+HIP+QFRE NL+DGLM+NYKN P   YGLS SQMDMFMT
Sbjct: 45   KLGRSAVRRGFRSPSAKASFDHIPKQFREGNLQDGLMENYKNVPQYFYGLSPSQMDMFMT 104

Query: 183  EDNPYRRQADQVTEESISSTRNYVDNGGMYSLSGTTNAS-SKCSMSVSMXXXXXXXXXXX 359
            EDNP  RQ+++VTEESISS RNY+DNGGM+SLSG  +   SK SMSVSM           
Sbjct: 105  EDNPISRQSERVTEESISSARNYMDNGGMWSLSGVNDRGPSKYSMSVSMYRGGRGSGRPR 164

Query: 360  XXXXXXXXXXXXXARICYLGMPIVPAVTELVVAQLMWLDYDNPSKPIYLYINSSGTQNEK 539
                         ARICYLGMPIVPAV EL+VAQ MWLD+DNPSKPIYLYINS+GTQNEK
Sbjct: 165  TAPPDLPSLLLD-ARICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYINSTGTQNEK 223

Query: 540  METVGSETEAYAIADTLAYCKSKIYTVNCGMAYGQAAMLLSLGAKGYRALQPNASTKLYL 719
            METVGSETEAYAIAD++AYCKS +YTVNCG AYGQAAMLLS+GAKGYR LQPNASTKLYL
Sbjct: 224  METVGSETEAYAIADSMAYCKSDVYTVNCGTAYGQAAMLLSVGAKGYRGLQPNASTKLYL 283

Query: 720  PKVNRSSGSVIDMWIKAKELDANTDYYIELLAKGXXXXXXXXXXXXXXXXXXXXXXXXXX 899
            PKVNRSSG+ IDMWIKAKELDAN++YYIELLAKG                          
Sbjct: 284  PKVNRSSGATIDMWIKAKELDANSEYYIELLAKG---TGKTKEEIKKDVERPKYLQAQEA 340

Query: 900  XXXXXXXXXXDSRDVAYEKRDYDGMLAQSKATRRQPGGGTQAAPSGFR 1043
                       S D AYEKR+YD MLAQ+K+ RR  G G QAAPSGFR
Sbjct: 341  IDYGLADKIISSMDPAYEKRNYDEMLAQAKSMRRAAGAGPQAAPSGFR 388


>ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 1, chloroplastic-like [Glycine max]
          Length = 372

 Score =  413 bits (1061), Expect = e-113
 Identities = 223/346 (64%), Positives = 254/346 (73%), Gaps = 1/346 (0%)
 Frame = +3

Query: 9    RKKSIRRCISASASTNDFEHIPRQFREENLKDGLMDNYKNAPSCLYGLSASQMDMFMTED 188
            R+ + RR  S SA  +  +HIP+QFR+ENLKDGLM+NYKNAP  LYGLS SQMDMFMTED
Sbjct: 30   RRVAPRRFNSFSAKCS-LDHIPKQFRKENLKDGLMENYKNAPQSLYGLSPSQMDMFMTED 88

Query: 189  NPYRRQADQVTEESISSTRNYVDNGGMYSLSGT-TNASSKCSMSVSMXXXXXXXXXXXXX 365
            NP R+Q+++VTEESISS +NY+DNGGM+SLSG   N +SK SMSVSM             
Sbjct: 89   NPIRQQSERVTEESISSAKNYMDNGGMWSLSGMGKNDASKYSMSVSMYRGGRGTGRPKTA 148

Query: 366  XXXXXXXXXXXARICYLGMPIVPAVTELVVAQLMWLDYDNPSKPIYLYINSSGTQNEKME 545
                       ARICYLGMPIVPAVTEL+VAQ MWLDYDNP+KPIYLYINSSGT NEK E
Sbjct: 149  PPDLPSLLLD-ARICYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTLNEKNE 207

Query: 546  TVGSETEAYAIADTLAYCKSKIYTVNCGMAYGQAAMLLSLGAKGYRALQPNASTKLYLPK 725
            TVGSETEAY+IAD ++Y K+ +YTVNCGMA+GQAAMLLSLG KGYRA+QPN+STKLYLPK
Sbjct: 208  TVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKLYLPK 267

Query: 726  VNRSSGSVIDMWIKAKELDANTDYYIELLAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 905
            VNRSSG+VIDMWIKAKEL+ANT+YYIELLAKG                            
Sbjct: 268  VNRSSGAVIDMWIKAKELEANTEYYIELLAKG-TGKSKEEIAKDVQRPKYLQAQDAIDYG 326

Query: 906  XXXXXXXXDSRDVAYEKRDYDGMLAQSKATRRQPGGGTQAAPSGFR 1043
                     SRDVA+EKR+YD MLAQS+A RRQ GG  QAAPSGFR
Sbjct: 327  IADKIIDSSSRDVAFEKRNYDEMLAQSRAKRRQGGGNPQAAPSGFR 372


>ref|XP_002313173.1| predicted protein [Populus trichocarpa] gi|222849581|gb|EEE87128.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  406 bits (1043), Expect = e-111
 Identities = 218/337 (64%), Positives = 242/337 (71%), Gaps = 1/337 (0%)
 Frame = +3

Query: 36   SASASTNDFEHIPRQFREENLKDGLMDNYKNAPSCLYGLSASQMDMFMTEDNPYRRQADQ 215
            S SAS N   HIP QFREENLKDGLM+NYKN P  LYGL+ SQMDMFMTEDNP RRQ+  
Sbjct: 59   SPSASGNPLNHIPTQFREENLKDGLMENYKNVPQSLYGLTPSQMDMFMTEDNPIRRQSGS 118

Query: 216  VTEESISSTRNYVDNGGMYSLSGTTNAS-SKCSMSVSMXXXXXXXXXXXXXXXXXXXXXX 392
            VTE+SISS +NY+D+GGMYS+SG  +   SK SMSVSM                      
Sbjct: 119  VTEQSISSRKNYLDHGGMYSVSGMMDQGPSKYSMSVSMYRGGGRGYGRPESAPPDLPSLL 178

Query: 393  XXARICYLGMPIVPAVTELVVAQLMWLDYDNPSKPIYLYINSSGTQNEKMETVGSETEAY 572
              ARICYLGMPIVPAVTEL+VAQ M+LDY++PSKPIYLYINSSGTQNEKMETVGSETEAY
Sbjct: 179  LDARICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNEKMETVGSETEAY 238

Query: 573  AIADTLAYCKSKIYTVNCGMAYGQAAMLLSLGAKGYRALQPNASTKLYLPKVNRSSGSVI 752
            AIAD ++YCKS IYTVNCGMAYGQAAMLLSLGAKGYRALQPN+STKLYLPKVNRSSG+ +
Sbjct: 239  AIADIMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSSTKLYLPKVNRSSGAAV 298

Query: 753  DMWIKAKELDANTDYYIELLAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 932
            DMWIKAKELDANT+YYIELLAKG                                     
Sbjct: 299  DMWIKAKELDANTEYYIELLAKG---TGKPKEELVKDIQRPKYLKAQEAIDYGIADKLLS 355

Query: 933  SRDVAYEKRDYDGMLAQSKATRRQPGGGTQAAPSGFR 1043
            S D A+EKRDYD +LAQ+KA + Q   G +AAPSG R
Sbjct: 356  SNDDAFEKRDYDALLAQTKAMKAQ-AAGPRAAPSGSR 391


>gb|ACU20022.1| unknown [Glycine max]
          Length = 364

 Score =  399 bits (1025), Expect = e-109
 Identities = 215/336 (63%), Positives = 247/336 (73%), Gaps = 1/336 (0%)
 Frame = +3

Query: 9    RKKSIRRCISASASTNDFEHIPRQFREENLKDGLMDNYKNAPSCLYGLSASQMDMFMTED 188
            R+ + RR  S+SA  +  +HIP+QFR+ENLKDGLM+NYKNAP  LYGLS SQMDMFMTED
Sbjct: 30   RRVAPRRFNSSSAKCS-LDHIPKQFRKENLKDGLMENYKNAPQSLYGLSPSQMDMFMTED 88

Query: 189  NPYRRQADQVTEESISSTRNYVDNGGMYSLSGTTNA-SSKCSMSVSMXXXXXXXXXXXXX 365
            NP R+Q+++VTEESISS +NY+DNGGM+SLSG   + +SK SMSVSM             
Sbjct: 89   NPIRQQSERVTEESISSAKNYIDNGGMWSLSGMGKSDASKYSMSVSMYRGGRGTGRPKTA 148

Query: 366  XXXXXXXXXXXARICYLGMPIVPAVTELVVAQLMWLDYDNPSKPIYLYINSSGTQNEKME 545
                       ARICYLGMPIVPAVTEL+VAQ MWLDYDNPSKPIYLYINSSGT NEK E
Sbjct: 149  PPDLPSLLLD-ARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGTLNEKNE 207

Query: 546  TVGSETEAYAIADTLAYCKSKIYTVNCGMAYGQAAMLLSLGAKGYRALQPNASTKLYLPK 725
            TVGSETEAY+IAD ++Y K+ +YTVNCGMA+GQAAMLLSLG KGYRA+QPN+STKLYLPK
Sbjct: 208  TVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKLYLPK 267

Query: 726  VNRSSGSVIDMWIKAKELDANTDYYIELLAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 905
            VNRSSG+VIDMWIKAKEL+ANT+YYIELLAKG                            
Sbjct: 268  VNRSSGAVIDMWIKAKELEANTEYYIELLAKG-TGKSKEEIAKDVQRPKYLQAQDAIDYG 326

Query: 906  XXXXXXXXDSRDVAYEKRDYDGMLAQSKATRRQPGG 1013
                     SRDVA+EKR+YD MLAQS+A RRQ GG
Sbjct: 327  IADKIIDSSSRDVAFEKRNYDEMLAQSRAMRRQGGG 362


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