BLASTX nr result
ID: Dioscorea21_contig00002506
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00002506 (817 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31404.3| unnamed protein product [Vitis vinifera] 87 4e-15 ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop... 87 4e-15 emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera] 87 4e-15 ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|2... 77 5e-12 ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [... 73 7e-11 >emb|CBI31404.3| unnamed protein product [Vitis vinifera] Length = 294 Score = 87.0 bits (214), Expect = 4e-15 Identities = 43/73 (58%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Frame = -2 Query: 816 YSGDRYGGPDRYPSNGYGKERGYXXXXXXXXXXXXXXXXXXGPVRYEG-SYRDRPGPYDR 640 +SGDRYGG DRYP NGYGK+RGY R EG SYR+RPGPYDR Sbjct: 224 FSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGS--ARNEGRSYRNRPGPYDR 281 Query: 639 PSRGGRPSSYDRY 601 P+RGGRPSS+DRY Sbjct: 282 PNRGGRPSSFDRY 294 >ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis vinifera] Length = 278 Score = 87.0 bits (214), Expect = 4e-15 Identities = 43/73 (58%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Frame = -2 Query: 816 YSGDRYGGPDRYPSNGYGKERGYXXXXXXXXXXXXXXXXXXGPVRYEG-SYRDRPGPYDR 640 +SGDRYGG DRYP NGYGK+RGY R EG SYR+RPGPYDR Sbjct: 208 FSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGS--ARNEGRSYRNRPGPYDR 265 Query: 639 PSRGGRPSSYDRY 601 P+RGGRPSS+DRY Sbjct: 266 PNRGGRPSSFDRY 278 >emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera] Length = 240 Score = 87.0 bits (214), Expect = 4e-15 Identities = 43/73 (58%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Frame = -2 Query: 816 YSGDRYGGPDRYPSNGYGKERGYXXXXXXXXXXXXXXXXXXGPVRYEG-SYRDRPGPYDR 640 +SGDRYGG DRYP NGYGK+RGY R EG SYR+RPGPYDR Sbjct: 170 FSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGS--ARNEGRSYRNRPGPYDR 227 Query: 639 PSRGGRPSSYDRY 601 P+RGGRPSS+DRY Sbjct: 228 PNRGGRPSSFDRY 240 >ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa] Length = 280 Score = 77.0 bits (188), Expect = 5e-12 Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Frame = -2 Query: 816 YSGDRYGGPDRYPSNGYGKERGYXXXXXXXXXXXXXXXXXXGPVRYE-GSYRDRPGPYDR 640 +SGDRYGG DRY NGYGK++GY P R + SYR+RP PYDR Sbjct: 210 FSGDRYGGSDRYAQNGYGKDKGYDRDVGPRGGNDRYGSGG--PQRNDRSSYRNRPAPYDR 267 Query: 639 PSRGGRPSSYDRY 601 PSRGG PSS++RY Sbjct: 268 PSRGGHPSSFERY 280 >ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis] gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding protein, putative [Ricinus communis] Length = 276 Score = 73.2 bits (178), Expect = 7e-11 Identities = 35/72 (48%), Positives = 42/72 (58%) Frame = -2 Query: 816 YSGDRYGGPDRYPSNGYGKERGYXXXXXXXXXXXXXXXXXXGPVRYEGSYRDRPGPYDRP 637 ++ DRYGG DRY N YGK+RGY R + SYR RPGPY+RP Sbjct: 208 FASDRYGGSDRYAHNSYGKDRGYERDAVTRGGSDRYGNGGP---RGDRSYRSRPGPYERP 264 Query: 636 SRGGRPSSYDRY 601 SRGG PSS++RY Sbjct: 265 SRGGHPSSFERY 276