BLASTX nr result

ID: Dioscorea21_contig00001997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001997
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27449.3| unnamed protein product [Vitis vinifera]              246   6e-63
ref|XP_002271912.1| PREDICTED: uncharacterized protein LOC100247...   246   8e-63
gb|AFK41019.1| unknown [Lotus japonicus]                              244   2e-62
ref|XP_002315054.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61
gb|ABK25235.1| unknown [Picea sitchensis]                             235   2e-59

>emb|CBI27449.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  246 bits (629), Expect = 6e-63
 Identities = 137/229 (59%), Positives = 161/229 (70%), Gaps = 3/229 (1%)
 Frame = -3

Query: 995 ISKDMMSVLPTLPRNLALQVPECSLKNKSNKFLYSGCSGIEFPFGGVLSVQREYFA-NCH 819
           +S   M++L     NL L +     + + N+ +  G SG   P  G      +  A + H
Sbjct: 38  VSFSDMTMLSGNHCNLWLGIQNHPSRGRFNQIICPG-SGPYIPSRGSFFYHGQCLAGSSH 96

Query: 818 RSIRGSRFSFVRAVSGDADAGDTKDENQDKETSQSE--EVSGGLSRDDLERIVGRDDSSF 645
           +S R  R  F   V    D  D++D    K+ S  E   V+  + R++LERIVG DDS+F
Sbjct: 97  QSARRCRPIFSSTVDDGMDPDDSEDGIDKKQPSNGELGGVNSEMIRENLERIVGSDDSTF 156

Query: 644 SGVDLATLIRKKYGRSYDVQLIKKEFMGRNLLAMNVMWKYMEQRSFPLTEEEYILRLDDV 465
           SG+DLATLIR KYGRSYDV LIKKEFMGRNLLA+NVMWKYMEQRSFPLTEEEY+LRLDDV
Sbjct: 157 SGLDLATLIRNKYGRSYDVLLIKKEFMGRNLLALNVMWKYMEQRSFPLTEEEYLLRLDDV 216

Query: 464 ANNLKCWGAVSHIRNSLEKLKERPRIGKAVSIFIDMDETGARSNEWIYK 318
           AN LKCWGA+SHIRNSLEKLKERPRIGKAVSIFIDMDE+G RSNEWIYK
Sbjct: 217 ANTLKCWGAISHIRNSLEKLKERPRIGKAVSIFIDMDESGGRSNEWIYK 265


>ref|XP_002271912.1| PREDICTED: uncharacterized protein LOC100247903 [Vitis vinifera]
          Length = 223

 Score =  246 bits (628), Expect = 8e-63
 Identities = 134/215 (62%), Positives = 155/215 (72%), Gaps = 3/215 (1%)
 Frame = -3

Query: 953 NLALQVPECSLKNKSNKFLYSGCSGIEFPFGGVLSVQREYFA-NCHRSIRGSRFSFVRAV 777
           NL L +     + + N+ +  G SG   P  G      +  A + H+S R  R  F   V
Sbjct: 10  NLWLGIQNHPSRGRFNQIICPG-SGPYIPSRGSFFYHGQCLAGSSHQSARRCRPIFSSTV 68

Query: 776 SGDADAGDTKDENQDKETSQSE--EVSGGLSRDDLERIVGRDDSSFSGVDLATLIRKKYG 603
               D  D++D    K+ S  E   V+  + R++LERIVG DDS+FSG+DLATLIR KYG
Sbjct: 69  DDGMDPDDSEDGIDKKQPSNGELGGVNSEMIRENLERIVGSDDSTFSGLDLATLIRNKYG 128

Query: 602 RSYDVQLIKKEFMGRNLLAMNVMWKYMEQRSFPLTEEEYILRLDDVANNLKCWGAVSHIR 423
           RSYDV LIKKEFMGRNLLA+NVMWKYMEQRSFPLTEEEY+LRLDDVAN LKCWGA+SHIR
Sbjct: 129 RSYDVLLIKKEFMGRNLLALNVMWKYMEQRSFPLTEEEYLLRLDDVANTLKCWGAISHIR 188

Query: 422 NSLEKLKERPRIGKAVSIFIDMDETGARSNEWIYK 318
           NSLEKLKERPRIGKAVSIFIDMDE+G RSNEWIYK
Sbjct: 189 NSLEKLKERPRIGKAVSIFIDMDESGGRSNEWIYK 223


>gb|AFK41019.1| unknown [Lotus japonicus]
          Length = 222

 Score =  244 bits (624), Expect = 2e-62
 Identities = 135/224 (60%), Positives = 158/224 (70%), Gaps = 3/224 (1%)
 Frame = -3

Query: 980 MSVLPTLPRNLALQVPECSLKNKSNKFLYSGCSGIEFPFGGVLSVQREYFAN-CHRSIRG 804
           M+++ T      L+VP+   +   +K  + G +G      G+ S    Y A  CH + R 
Sbjct: 1   MNIMSTHQCGWPLRVPDNPDRGNIHKAPFPGYTGTYSTSRGLDSRNVGYLAGKCHHNARK 60

Query: 803 SRFSFVRAVSGDADAGDTKDENQDKETSQSEEVSGGLS--RDDLERIVGRDDSSFSGVDL 630
            R  F   VS   D  D+ D+  DK   Q+ E+       R+ LE+IVG DDS+FSG DL
Sbjct: 61  CRPVFSSLVSDSLDPYDSDDK--DKNIPQNGEIDEHSKKLRESLEKIVGTDDSAFSGFDL 118

Query: 629 ATLIRKKYGRSYDVQLIKKEFMGRNLLAMNVMWKYMEQRSFPLTEEEYILRLDDVANNLK 450
           ATLIR KYGRSYDVQLIKKEFMGRNLLA+NVMWKYMEQRSFPL+EEEYILRLDDVAN LK
Sbjct: 119 ATLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQRSFPLSEEEYILRLDDVANTLK 178

Query: 449 CWGAVSHIRNSLEKLKERPRIGKAVSIFIDMDETGARSNEWIYK 318
           CWGAVSHIRNSL K KERPRIGKAVS+FIDMDE+GAR+NEWIYK
Sbjct: 179 CWGAVSHIRNSLAKSKERPRIGKAVSLFIDMDESGARANEWIYK 222


>ref|XP_002315054.1| predicted protein [Populus trichocarpa] gi|222864094|gb|EEF01225.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  241 bits (616), Expect = 2e-61
 Identities = 125/175 (71%), Positives = 143/175 (81%), Gaps = 4/175 (2%)
 Frame = -3

Query: 830 ANCHR-SIRGSRFSFVRAVSGDADAGDTKDEN-QDKETSQSEE--VSGGLSRDDLERIVG 663
           ++C+R S R  R  F   V    D  D +++  +DK++S+ E   +   L R++LERIVG
Sbjct: 59  SSCYRPSTRKYRPVFSSTVDDPRDQDDPEEDGARDKDSSKGETGGIDSELLRENLERIVG 118

Query: 662 RDDSSFSGVDLATLIRKKYGRSYDVQLIKKEFMGRNLLAMNVMWKYMEQRSFPLTEEEYI 483
            DDS+FSG+DLATLIR KYGRSYDVQLIKKEFMGRNLLA+NVMWKY EQRSFPLTEEEYI
Sbjct: 119 SDDSAFSGIDLATLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWKYREQRSFPLTEEEYI 178

Query: 482 LRLDDVANNLKCWGAVSHIRNSLEKLKERPRIGKAVSIFIDMDETGARSNEWIYK 318
           LRLDDVAN LKCWGAVSHIRNSLEK KERPRIGKAVSIFIDMDE+G R+NEWIYK
Sbjct: 179 LRLDDVANTLKCWGAVSHIRNSLEKSKERPRIGKAVSIFIDMDESGGRANEWIYK 233


>gb|ABK25235.1| unknown [Picea sitchensis]
          Length = 224

 Score =  235 bits (599), Expect = 2e-59
 Identities = 122/196 (62%), Positives = 146/196 (74%), Gaps = 4/196 (2%)
 Frame = -3

Query: 893 SGCSGIEFPFGGVLSVQREYFANCHRSIRGSRFSFVRAVSGDADAGDTKDENQDKETSQS 714
           S CS    P    L  QR +F   +      +   VRA  G+ +  +  D+N+D +    
Sbjct: 31  SPCSVAFTPLLVTLFPQRNFFGCINLRQSKMKAIVVRATLGEKEPNE--DDNEDHDQVSG 88

Query: 713 EEVSGGLS----RDDLERIVGRDDSSFSGVDLATLIRKKYGRSYDVQLIKKEFMGRNLLA 546
           ++ S  ++    R DLERIVG+DDS+FSG++LA+LIR KYGRSYDV LIKKEFMGRNLLA
Sbjct: 89  DKNSNNMNENKFRKDLERIVGKDDSAFSGIELASLIRNKYGRSYDVTLIKKEFMGRNLLA 148

Query: 545 MNVMWKYMEQRSFPLTEEEYILRLDDVANNLKCWGAVSHIRNSLEKLKERPRIGKAVSIF 366
           MNVMWKY EQRSFPLTEEEY+LRLDDVANNLKCWGAVSHIRNSL K +ERPRIGKAVSIF
Sbjct: 149 MNVMWKYREQRSFPLTEEEYLLRLDDVANNLKCWGAVSHIRNSLAKSRERPRIGKAVSIF 208

Query: 365 IDMDETGARSNEWIYK 318
           ID+DE+G R+NEWIY+
Sbjct: 209 IDLDESGGRANEWIYR 224


Top