BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001980
         (1792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567538.1| PREDICTED: aspartic proteinase-like [Brachyp...   673   0.0  
gb|AFW79470.1| retrotransposon protein SINE subclass isoform 1 [...   671   0.0  
ref|NP_001152501.1| retrotransposon protein SINE subclass precur...   671   0.0  
gb|ACF87177.1| unknown [Zea mays]                                     669   0.0  
gb|ACL54337.1| unknown [Zea mays]                                     668   0.0  

>ref|XP_003567538.1| PREDICTED: aspartic proteinase-like [Brachypodium distachyon]
          Length = 503

 Score =  673 bits (1736), Expect = 0.0
 Identities = 316/468 (67%), Positives = 386/468 (82%), Gaps = 1/468 (0%)
 Frame = +1

Query: 70   DGLLRIKLKKKKFDLESLVALKVARKEYN-LHKKYGSKPNLLNSDADIIPLKNYLDAQYY 246
            DG+LRI L KK+ D E+L A K+AR++ N L    GS   L  SD DI+PL NYLD QYY
Sbjct: 26   DGVLRINLSKKRLDKEALTAAKLARQQRNVLRSGDGSYRYLGVSDDDIVPLDNYLDTQYY 85

Query: 247  GEIGIGSPPQNFTVVFDTGSSNLWVPSSKCYFSLPCYFHPXXXXXXXXXXXANGKTCKIT 426
            GEIG+G+PPQNFTV+FDTGSSNLWVPSSKCYFS+ CY H             NG+TC I+
Sbjct: 86   GEIGVGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYLHHKYKSTKSSTYKKNGETCTIS 145

Query: 427  YGSGSISGYFSEDNVLVGDLVVKDQVFIEATRESALAFLLAKFDGILGLGFQEISVGNFP 606
            YGSGSI+G+FSED+VLVGDLVVK+Q FIE TRE++ +F++ KFDGILGLGF EISVG+ P
Sbjct: 146  YGSGSIAGFFSEDSVLVGDLVVKNQKFIETTREASPSFIIGKFDGILGLGFPEISVGSAP 205

Query: 607  PIWSTMADQNLIDEKIFSFWLNRNADDEDGGELVFGGVVPQHFKGNHSYVPISRKGYWQF 786
            P+W +M +Q LI + IFSFWLNR+ D   GGELVFGGV  +H+KG H+YVP++RKGYWQF
Sbjct: 206  PVWQSMQEQKLIAKDIFSFWLNRDPDAPTGGELVFGGVDQKHYKGKHTYVPVTRKGYWQF 265

Query: 787  DMGDILVGGYSTGYCAGGCAAIADSGTSLLAGPTTIVTEINHAIGAQGVISAECKEVVEE 966
            DMGD+L+GG STG+CAGGCAAI DSGTSLLAGPTTIV ++NHAIGA+G+IS ECKEVV E
Sbjct: 266  DMGDLLIGGQSTGFCAGGCAAIVDSGTSLLAGPTTIVAQVNHAIGAEGIISMECKEVVRE 325

Query: 967  YGDIIIEMLIAQTRPDKICSQIGLCLFDGSQYVGTGIESVVGKPEKEQSSANSDIFCTAC 1146
            YG++I+E+L+AQTRP K+CSQIGLC+FDG++ V   IESVV     E+ +  SD+ CTAC
Sbjct: 326  YGEMILELLVAQTRPQKVCSQIGLCVFDGTKSVSNQIESVV-----EKENRGSDLLCTAC 380

Query: 1147 EMAVVWMQNQLRMNETKELILKYANQLCEKLPSPMGESTVDCDKIAEMPEISYTIGSKTF 1326
            EMAVVW+QNQLR N+TKELIL+YANQLCE+LPSP GESTVDC +I++MP +++TI +KTF
Sbjct: 381  EMAVVWIQNQLRQNQTKELILQYANQLCERLPSPNGESTVDCHQISKMPNLAFTIANKTF 440

Query: 1327 VLTPEQYVLKVEELGVTQCLSGFMAFDVPPPRGPLWVLGDVFMGAYHT 1470
             LTPEQY++K+E+ G T C+SGFMAFD+PPPRGPLW+LGDVFMGAYHT
Sbjct: 441  TLTPEQYIVKLEQSGQTICISGFMAFDIPPPRGPLWILGDVFMGAYHT 488


>gb|AFW79470.1| retrotransposon protein SINE subclass isoform 1 [Zea mays]
            gi|413946822|gb|AFW79471.1| retrotransposon protein SINE
            subclass isoform 2 [Zea mays]
          Length = 545

 Score =  671 bits (1731), Expect = 0.0
 Identities = 315/489 (64%), Positives = 385/489 (78%), Gaps = 1/489 (0%)
 Frame = +1

Query: 7    LLLFVGLWFXXXXXXXXXXXXDGLLRIKLKKKKFDLESLVALKVARKEYNLHKKYGSKPN 186
            LLL    W             DGLLRI L KK+ D E+L A K+A+KE NL +  G+   
Sbjct: 47   LLLLACFWVLSTCSLLLDASSDGLLRINLNKKRLDKEALTAAKLAKKESNLRRSVGADQY 106

Query: 187  LLNSDADIIPLKNYLDAQYYGEIGIGSPPQNFTVVFDTGSSNLWVPSSKCYFSLPCYFHP 366
            L  S  DI+PL NYLD QY+G+I IG+PPQNFTV+FDTGSSNLWVPSSKCYFS+ CY H 
Sbjct: 107  LSASTDDIVPLDNYLDTQYFGQISIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYLHH 166

Query: 367  XXXXXXXXXXXANGKTCKITYGSGSISGYFSEDNVLVGDLVVKDQVFIEATRESALAFLL 546
                        NG++C ITYGSG I+G+FSEDNVLVG+LVV++Q FIE TRE++  F++
Sbjct: 167  RYKSTKSKTYTKNGESCTITYGSGQIAGFFSEDNVLVGNLVVQNQKFIETTRETSPTFII 226

Query: 547  AKFDGILGLGFQEISVGNFPPIWSTMADQNLIDEKIFSFWLNRNAD-DEDGGELVFGGVV 723
             KFDGILGLGF EISVG  PPIW +M  Q L+ + +FSFWLNR+ D    GGELVFGGV 
Sbjct: 227  GKFDGILGLGFPEISVGGAPPIWQSMKQQKLVAKDVFSFWLNRDPDASSGGGELVFGGVD 286

Query: 724  PQHFKGNHSYVPISRKGYWQFDMGDILVGGYSTGYCAGGCAAIADSGTSLLAGPTTIVTE 903
            P+H+KG+H+YVP++RKGYWQFDMGD+++GG+STG+CAGGCAAI DSGTSLLAGPTTIV +
Sbjct: 287  PKHYKGDHTYVPVTRKGYWQFDMGDLIIGGHSTGFCAGGCAAIVDSGTSLLAGPTTIVAQ 346

Query: 904  INHAIGAQGVISAECKEVVEEYGDIIIEMLIAQTRPDKICSQIGLCLFDGSQYVGTGIES 1083
            +NHAIGA+G+IS ECKEVV EYG++I+E+LI+QT P K+C+QIGLC+FDG+  V   IES
Sbjct: 347  VNHAIGAEGIISTECKEVVSEYGEMILELLISQTSPQKVCTQIGLCVFDGAHSVSNPIES 406

Query: 1084 VVGKPEKEQSSANSDIFCTACEMAVVWMQNQLRMNETKELILKYANQLCEKLPSPMGEST 1263
            VV     E+    SD+FCTACEMAVVW+QNQLR N+TKELIL YANQLCE+LPSP GEST
Sbjct: 407  VV-----EKQKRGSDLFCTACEMAVVWIQNQLRENKTKELILNYANQLCERLPSPNGEST 461

Query: 1264 VDCDKIAEMPEISYTIGSKTFVLTPEQYVLKVEELGVTQCLSGFMAFDVPPPRGPLWVLG 1443
            VDC +I++MP +++TI +KTF LTPEQY++K+E+ G T C+SGFMAFDVPPPRGPLW+LG
Sbjct: 462  VDCHQISKMPNLAFTIANKTFTLTPEQYIVKLEQAGQTICISGFMAFDVPPPRGPLWILG 521

Query: 1444 DVFMGAYHT 1470
            DVFMGAYHT
Sbjct: 522  DVFMGAYHT 530


>ref|NP_001152501.1| retrotransposon protein SINE subclass precursor [Zea mays]
            gi|195624058|gb|ACG33859.1| retrotransposon protein SINE
            subclass [Zea mays] gi|195656921|gb|ACG47928.1|
            retrotransposon protein SINE subclass [Zea mays]
            gi|413946824|gb|AFW79473.1| retrotransposon protein SINE
            subclass isoform 1 [Zea mays] gi|413946825|gb|AFW79474.1|
            retrotransposon protein SINE subclass isoform 2 [Zea
            mays] gi|413946826|gb|AFW79475.1| retrotransposon protein
            SINE subclass isoform 3 [Zea mays]
          Length = 504

 Score =  671 bits (1731), Expect = 0.0
 Identities = 315/489 (64%), Positives = 385/489 (78%), Gaps = 1/489 (0%)
 Frame = +1

Query: 7    LLLFVGLWFXXXXXXXXXXXXDGLLRIKLKKKKFDLESLVALKVARKEYNLHKKYGSKPN 186
            LLL    W             DGLLRI L KK+ D E+L A K+A+KE NL +  G+   
Sbjct: 6    LLLLACFWVLSTCSLLLDASSDGLLRINLNKKRLDKEALTAAKLAKKESNLRRSVGADQY 65

Query: 187  LLNSDADIIPLKNYLDAQYYGEIGIGSPPQNFTVVFDTGSSNLWVPSSKCYFSLPCYFHP 366
            L  S  DI+PL NYLD QY+G+I IG+PPQNFTV+FDTGSSNLWVPSSKCYFS+ CY H 
Sbjct: 66   LSASTDDIVPLDNYLDTQYFGQISIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYLHH 125

Query: 367  XXXXXXXXXXXANGKTCKITYGSGSISGYFSEDNVLVGDLVVKDQVFIEATRESALAFLL 546
                        NG++C ITYGSG I+G+FSEDNVLVG+LVV++Q FIE TRE++  F++
Sbjct: 126  RYKSTKSKTYTKNGESCTITYGSGQIAGFFSEDNVLVGNLVVQNQKFIETTRETSPTFII 185

Query: 547  AKFDGILGLGFQEISVGNFPPIWSTMADQNLIDEKIFSFWLNRNAD-DEDGGELVFGGVV 723
             KFDGILGLGF EISVG  PPIW +M  Q L+ + +FSFWLNR+ D    GGELVFGGV 
Sbjct: 186  GKFDGILGLGFPEISVGGAPPIWQSMKQQKLVAKDVFSFWLNRDPDASSGGGELVFGGVD 245

Query: 724  PQHFKGNHSYVPISRKGYWQFDMGDILVGGYSTGYCAGGCAAIADSGTSLLAGPTTIVTE 903
            P+H+KG+H+YVP++RKGYWQFDMGD+++GG+STG+CAGGCAAI DSGTSLLAGPTTIV +
Sbjct: 246  PKHYKGDHTYVPVTRKGYWQFDMGDLIIGGHSTGFCAGGCAAIVDSGTSLLAGPTTIVAQ 305

Query: 904  INHAIGAQGVISAECKEVVEEYGDIIIEMLIAQTRPDKICSQIGLCLFDGSQYVGTGIES 1083
            +NHAIGA+G+IS ECKEVV EYG++I+E+LI+QT P K+C+QIGLC+FDG+  V   IES
Sbjct: 306  VNHAIGAEGIISTECKEVVSEYGEMILELLISQTSPQKVCTQIGLCVFDGAHSVSNPIES 365

Query: 1084 VVGKPEKEQSSANSDIFCTACEMAVVWMQNQLRMNETKELILKYANQLCEKLPSPMGEST 1263
            VV     E+    SD+FCTACEMAVVW+QNQLR N+TKELIL YANQLCE+LPSP GEST
Sbjct: 366  VV-----EKQKRGSDLFCTACEMAVVWIQNQLRENKTKELILNYANQLCERLPSPNGEST 420

Query: 1264 VDCDKIAEMPEISYTIGSKTFVLTPEQYVLKVEELGVTQCLSGFMAFDVPPPRGPLWVLG 1443
            VDC +I++MP +++TI +KTF LTPEQY++K+E+ G T C+SGFMAFDVPPPRGPLW+LG
Sbjct: 421  VDCHQISKMPNLAFTIANKTFTLTPEQYIVKLEQAGQTICISGFMAFDVPPPRGPLWILG 480

Query: 1444 DVFMGAYHT 1470
            DVFMGAYHT
Sbjct: 481  DVFMGAYHT 489


>gb|ACF87177.1| unknown [Zea mays]
          Length = 504

 Score =  669 bits (1727), Expect = 0.0
 Identities = 315/489 (64%), Positives = 384/489 (78%), Gaps = 1/489 (0%)
 Frame = +1

Query: 7    LLLFVGLWFXXXXXXXXXXXXDGLLRIKLKKKKFDLESLVALKVARKEYNLHKKYGSKPN 186
            LLL    W             DGLLRI L KK+ D E+L A K+A+KE NL +  G+   
Sbjct: 6    LLLLACFWVLSTCSLLLDASSDGLLRINLNKKRLDKEALTAAKLAKKESNLRRSVGADQY 65

Query: 187  LLNSDADIIPLKNYLDAQYYGEIGIGSPPQNFTVVFDTGSSNLWVPSSKCYFSLPCYFHP 366
            L  S  DI+PL NYLD QY+G+I IG+PPQNFTV+FDTGSSNLWVPSSKCYFS+ CY H 
Sbjct: 66   LSASTDDIVPLDNYLDTQYFGQISIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYLHH 125

Query: 367  XXXXXXXXXXXANGKTCKITYGSGSISGYFSEDNVLVGDLVVKDQVFIEATRESALAFLL 546
                        NG++C ITYGSG I+G+FSEDNVLVG+LVV++Q FIE TRE++  F++
Sbjct: 126  RYKSTKSKTYTKNGESCTITYGSGQIAGFFSEDNVLVGNLVVQNQKFIETTRETSPTFII 185

Query: 547  AKFDGILGLGFQEISVGNFPPIWSTMADQNLIDEKIFSFWLNRNAD-DEDGGELVFGGVV 723
             KFDGILGLGF EISVG  PPIW +M  Q L+ + +FSFWLNR+ D    GGELVFGGV 
Sbjct: 186  GKFDGILGLGFPEISVGGAPPIWQSMKQQKLVAKDVFSFWLNRDPDASSGGGELVFGGVD 245

Query: 724  PQHFKGNHSYVPISRKGYWQFDMGDILVGGYSTGYCAGGCAAIADSGTSLLAGPTTIVTE 903
            P+H+KG+H+YVP +RKGYWQFDMGD+++GG+STG+CAGGCAAI DSGTSLLAGPTTIV +
Sbjct: 246  PKHYKGDHTYVPATRKGYWQFDMGDLIIGGHSTGFCAGGCAAIVDSGTSLLAGPTTIVAQ 305

Query: 904  INHAIGAQGVISAECKEVVEEYGDIIIEMLIAQTRPDKICSQIGLCLFDGSQYVGTGIES 1083
            +NHAIGA+G+IS ECKEVV EYG++I+E+LI+QT P K+C+QIGLC+FDG+  V   IES
Sbjct: 306  VNHAIGAEGIISTECKEVVSEYGEMILELLISQTSPQKVCTQIGLCVFDGAHSVSNPIES 365

Query: 1084 VVGKPEKEQSSANSDIFCTACEMAVVWMQNQLRMNETKELILKYANQLCEKLPSPMGEST 1263
            VV     E+    SD+FCTACEMAVVW+QNQLR N+TKELIL YANQLCE+LPSP GEST
Sbjct: 366  VV-----EKQKRGSDLFCTACEMAVVWIQNQLRENKTKELILNYANQLCERLPSPNGEST 420

Query: 1264 VDCDKIAEMPEISYTIGSKTFVLTPEQYVLKVEELGVTQCLSGFMAFDVPPPRGPLWVLG 1443
            VDC +I++MP +++TI +KTF LTPEQY++K+E+ G T C+SGFMAFDVPPPRGPLW+LG
Sbjct: 421  VDCHQISKMPNLAFTIANKTFTLTPEQYIVKLEQAGQTICISGFMAFDVPPPRGPLWILG 480

Query: 1444 DVFMGAYHT 1470
            DVFMGAYHT
Sbjct: 481  DVFMGAYHT 489


>gb|ACL54337.1| unknown [Zea mays]
          Length = 504

 Score =  668 bits (1724), Expect = 0.0
 Identities = 314/489 (64%), Positives = 384/489 (78%), Gaps = 1/489 (0%)
 Frame = +1

Query: 7    LLLFVGLWFXXXXXXXXXXXXDGLLRIKLKKKKFDLESLVALKVARKEYNLHKKYGSKPN 186
            LLL    W             DGLLRI L KK+ D E+L A K+A+KE NL +  G+   
Sbjct: 6    LLLLACFWVLSTCSLLLDASSDGLLRINLNKKRLDKEALTAAKLAKKESNLRRSVGADQY 65

Query: 187  LLNSDADIIPLKNYLDAQYYGEIGIGSPPQNFTVVFDTGSSNLWVPSSKCYFSLPCYFHP 366
            L  S  DI+PL NYLD QY+G+I IG+PPQNFTV+FDTGSSNLWVPSSKCYFS+ CY H 
Sbjct: 66   LSASTDDIVPLDNYLDTQYFGQISIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYLHH 125

Query: 367  XXXXXXXXXXXANGKTCKITYGSGSISGYFSEDNVLVGDLVVKDQVFIEATRESALAFLL 546
                        NG++C ITYGSG I+G+FSEDNVLVG+LVV++Q FIE TRE++  F++
Sbjct: 126  RYKSTKSKTYTKNGESCTITYGSGQIAGFFSEDNVLVGNLVVQNQKFIETTRETSPTFII 185

Query: 547  AKFDGILGLGFQEISVGNFPPIWSTMADQNLIDEKIFSFWLNRNAD-DEDGGELVFGGVV 723
             KFDGILGLGF EISVG  PPIW +M  Q L+ + +FSFWLNR+ D    GGE VFGGV 
Sbjct: 186  GKFDGILGLGFPEISVGGAPPIWQSMKQQKLVAKDVFSFWLNRDPDASSGGGEPVFGGVD 245

Query: 724  PQHFKGNHSYVPISRKGYWQFDMGDILVGGYSTGYCAGGCAAIADSGTSLLAGPTTIVTE 903
            P+H+KG+H+YVP++RKGYWQFDMGD+++GG+STG+CAGGCAAI DSGTSLLAGPTTIV +
Sbjct: 246  PKHYKGDHTYVPVTRKGYWQFDMGDLIIGGHSTGFCAGGCAAIVDSGTSLLAGPTTIVAQ 305

Query: 904  INHAIGAQGVISAECKEVVEEYGDIIIEMLIAQTRPDKICSQIGLCLFDGSQYVGTGIES 1083
            +NHAIGA+G+IS ECKEVV EYG++I+E+LI+QT P K+C+QIGLC+FDG+  V   IES
Sbjct: 306  VNHAIGAEGIISTECKEVVSEYGEMILELLISQTSPQKVCTQIGLCVFDGAHSVSNPIES 365

Query: 1084 VVGKPEKEQSSANSDIFCTACEMAVVWMQNQLRMNETKELILKYANQLCEKLPSPMGEST 1263
            VV     E+    SD+FCTACEMAVVW+QNQLR N+TKELIL YANQLCE+LPSP GEST
Sbjct: 366  VV-----EKQKRGSDLFCTACEMAVVWIQNQLRENKTKELILNYANQLCERLPSPNGEST 420

Query: 1264 VDCDKIAEMPEISYTIGSKTFVLTPEQYVLKVEELGVTQCLSGFMAFDVPPPRGPLWVLG 1443
            VDC +I++MP +++TI +KTF LTPEQY++K+E+ G T C+SGFMAFDVPPPRGPLW+LG
Sbjct: 421  VDCHQISKMPNLAFTIANKTFTLTPEQYIVKLEQAGQTICISGFMAFDVPPPRGPLWILG 480

Query: 1444 DVFMGAYHT 1470
            DVFMGAYHT
Sbjct: 481  DVFMGAYHT 489