BLASTX nr result

ID: Dioscorea21_contig00001972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001972
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ41166.1| chloroplast protein 12 precursor [Cynara cardunc...   120   1e-25
ref|XP_004163144.1| PREDICTED: calvin cycle protein CP12-1, chlo...   118   6e-25
ref|XP_004135995.1| PREDICTED: calvin cycle protein CP12-1, chlo...   118   6e-25
dbj|BAK03023.1| predicted protein [Hordeum vulgare subsp. vulgar...   115   5e-24
ref|XP_002515284.1| conserved hypothetical protein [Ricinus comm...   113   1e-23

>emb|CAJ41166.1| chloroplast protein 12 precursor [Cynara cardunculus var. scolymus]
          Length = 149

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/109 (55%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
 Frame = -1

Query: 470 PDIISEKVKASIEAAKETCKENAESGECAAAWDEVEELSAAASHARDRLMTTDPLETFCN 291
           P+ +SEK+ +SIE+AKE+C E+  SGEC AAWDEVEELSAA+SHARD+   TDPLET+C 
Sbjct: 21  PEGLSEKIASSIESAKESCAEDLASGECVAAWDEVEELSAASSHARDKAKDTDPLETYCK 80

Query: 290 DNPETEECRTYED*FLNFQSF-----WGFLVILLWIIISYHMLWVYDCN 159
           DNPET+ECRTYED       F     +  +  L +III+  ++ +YD N
Sbjct: 81  DNPETDECRTYEDLIDAIHVFSVLLRYCLVDYLFYIIIAELLVVMYDTN 129


>ref|XP_004163144.1| PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis
           sativus]
          Length = 142

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/73 (78%), Positives = 61/73 (83%)
 Frame = -1

Query: 470 PDIISEKVKASIEAAKETCKENAESGECAAAWDEVEELSAAASHARDRLMTTDPLETFCN 291
           PD ISEKV  SI+ A+ TC E+  SGECAAAWDEVEELSAAASHARDRL  +DPLE FC 
Sbjct: 70  PDRISEKVVESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCK 129

Query: 290 DNPETEECRTYED 252
           DNPETEECRTYED
Sbjct: 130 DNPETEECRTYED 142


>ref|XP_004135995.1| PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis
           sativus]
          Length = 125

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/73 (78%), Positives = 61/73 (83%)
 Frame = -1

Query: 470 PDIISEKVKASIEAAKETCKENAESGECAAAWDEVEELSAAASHARDRLMTTDPLETFCN 291
           PD ISEKV  SI+ A+ TC E+  SGECAAAWDEVEELSAAASHARDRL  +DPLE FC 
Sbjct: 53  PDRISEKVVESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCK 112

Query: 290 DNPETEECRTYED 252
           DNPETEECRTYED
Sbjct: 113 DNPETEECRTYED 125


>dbj|BAK03023.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326531248|dbj|BAK04975.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 129

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/75 (69%), Positives = 63/75 (84%)
 Frame = -1

Query: 479 PSKPDIISEKVKASIEAAKETCKENAESGECAAAWDEVEELSAAASHARDRLMTTDPLET 300
           PS P  IS+K+  SI+ A+ETC E+A SGECAAAWDEVEELSAAASHARD+L  +DPLE 
Sbjct: 54  PSTPSGISDKMSESIKEAQETCSEDAASGECAAAWDEVEELSAAASHARDKLKDSDPLEN 113

Query: 299 FCNDNPETEECRTYE 255
           +C +NPET+ECRTY+
Sbjct: 114 YCKENPETDECRTYD 128


>ref|XP_002515284.1| conserved hypothetical protein [Ricinus communis]
           gi|223545764|gb|EEF47268.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/73 (69%), Positives = 61/73 (83%)
 Frame = -1

Query: 470 PDIISEKVKASIEAAKETCKENAESGECAAAWDEVEELSAAASHARDRLMTTDPLETFCN 291
           PD ISEKV+ SI+ AK+ C+++  SGEC AAWD VEELSAAASHARD+   +DPLET+C 
Sbjct: 56  PDSISEKVEESIKDAKQACEDDPASGECVAAWDTVEELSAAASHARDKAKDSDPLETYCK 115

Query: 290 DNPETEECRTYED 252
           DNPET+ECRTYED
Sbjct: 116 DNPETDECRTYED 128


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