BLASTX nr result

ID: Dioscorea21_contig00001968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001968
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001758070.1| predicted protein [Physcomitrella patens sub...   118   5e-25
gb|ABK22479.1| unknown [Picea sitchensis] gi|116790077|gb|ABK254...   118   7e-25
sp|O65071.1|RL31_PICMA RecName: Full=60S ribosomal protein L31 g...   117   9e-25
sp|Q9MAV7.1|RL31_PANGI RecName: Full=60S ribosomal protein L31 g...   116   3e-24
ref|XP_001763016.1| predicted protein [Physcomitrella patens sub...   115   3e-24

>ref|XP_001758070.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162690947|gb|EDQ77312.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 120

 Score =  118 bits (296), Expect = 5e-25
 Identities = 55/67 (82%), Positives = 63/67 (94%)
 Frame = +3

Query: 60  MVEKGGVKRRDVVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVKL 239
           MVEKG  ++ +VVTREYTINLHKRLHGCTFKKMAP A+KEI+KFAQKAMGT+DVR+DVKL
Sbjct: 1   MVEKGKSRKDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKAMGTSDVRLDVKL 60

Query: 240 NKNIWSR 260
           NK+IWSR
Sbjct: 61  NKHIWSR 67


>gb|ABK22479.1| unknown [Picea sitchensis] gi|116790077|gb|ABK25493.1| unknown
           [Picea sitchensis] gi|116792523|gb|ABK26401.1| unknown
           [Picea sitchensis] gi|224284854|gb|ACN40157.1| unknown
           [Picea sitchensis] gi|224285867|gb|ACN40647.1| unknown
           [Picea sitchensis] gi|224286864|gb|ACN41135.1| unknown
           [Picea sitchensis]
          Length = 120

 Score =  118 bits (295), Expect = 7e-25
 Identities = 55/67 (82%), Positives = 61/67 (91%)
 Frame = +3

Query: 60  MVEKGGVKRRDVVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVKL 239
           MVEKG  +R +VVTREYTINLHKRLHGCTFKKMAP A+KEI+KFAQK MGTTDVR+DVKL
Sbjct: 1   MVEKGKSRRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTTDVRLDVKL 60

Query: 240 NKNIWSR 260
           NK +WSR
Sbjct: 61  NKAVWSR 67


>sp|O65071.1|RL31_PICMA RecName: Full=60S ribosomal protein L31 gi|2982295|gb|AAC32133.1|
           probable 60S ribosomal protein L31 [Picea mariana]
          Length = 120

 Score =  117 bits (294), Expect = 9e-25
 Identities = 54/67 (80%), Positives = 61/67 (91%)
 Frame = +3

Query: 60  MVEKGGVKRRDVVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVKL 239
           MVEKG  +R +V TREYTINLH+RLHGCTFKKMAP A+KEI+KFAQKAMGTTDVR+DVKL
Sbjct: 1   MVEKGKSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKL 60

Query: 240 NKNIWSR 260
           NK +WSR
Sbjct: 61  NKAVWSR 67


>sp|Q9MAV7.1|RL31_PANGI RecName: Full=60S ribosomal protein L31 gi|8131703|dbj|BAA96368.1|
           ribosomal protein L31 [Panax ginseng]
          Length = 121

 Score =  116 bits (290), Expect = 3e-24
 Identities = 56/67 (83%), Positives = 60/67 (89%)
 Frame = +3

Query: 60  MVEKGGVKRRDVVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVKL 239
           MVEK   ++ +VVTREYTINLHKRLHGCTFKK APNAIKEI+KFAQKAMGT DVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 240 NKNIWSR 260
           NK IWSR
Sbjct: 61  NKQIWSR 67


>ref|XP_001763016.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162685828|gb|EDQ72221.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 120

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/67 (79%), Positives = 62/67 (92%)
 Frame = +3

Query: 60  MVEKGGVKRRDVVTREYTINLHKRLHGCTFKKMAPNAIKEIKKFAQKAMGTTDVRVDVKL 239
           MVEK  +++ +VVTREYTINLHKRLHGCTFKKMAP A+KEI+KFAQK MGT+DVR+DVKL
Sbjct: 1   MVEKTKIRKDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKTMGTSDVRLDVKL 60

Query: 240 NKNIWSR 260
           NK+IWSR
Sbjct: 61  NKHIWSR 67


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