BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001964
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872037.1| HCF136 [Arabidopsis lyrata subsp. lyrata] gi...   145   3e-33
ref|NP_197703.1| photosystem II stability/assembly factor HCF136...   144   6e-33
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   143   1e-32
ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   143   1e-32
gb|AFW75693.1| plastid high chlorophyll fluorescence 136 Precurs...   142   4e-32

>ref|XP_002872037.1| HCF136 [Arabidopsis lyrata subsp. lyrata]
           gi|297317874|gb|EFH48296.1| HCF136 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 393

 Score =  145 bits (366), Expect = 3e-33
 Identities = 68/84 (80%), Positives = 71/84 (84%)
 Frame = -3

Query: 253 DGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXLSKG 74
           DGRYVAVSSRGNF+LTWEPGQPYWQPHNRA+ARRIQNMGWRAD             LSKG
Sbjct: 247 DGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKG 306

Query: 73  TGITEDFEEVPVQSRGFGILDVGY 2
           TG+TEDFEEVPVQSRGFGILDVGY
Sbjct: 307 TGLTEDFEEVPVQSRGFGILDVGY 330


>ref|NP_197703.1| photosystem II stability/assembly factor HCF136 [Arabidopsis
           thaliana] gi|6016183|sp|O82660.1|P2SAF_ARATH RecName:
           Full=Photosystem II stability/assembly factor HCF136,
           chloroplastic; Flags: Precursor
           gi|3559807|emb|CAA75723.1| HCF136 protein [Arabidopsis
           thaliana] gi|9759370|dbj|BAB09829.1| photosystem II
           stability/assembly factor HCF136 [Arabidopsis thaliana]
           gi|15010780|gb|AAK74049.1| AT5g23120/MYJ24_11
           [Arabidopsis thaliana] gi|28416529|gb|AAO42795.1|
           At5g23120/MYJ24_11 [Arabidopsis thaliana]
           gi|332005741|gb|AED93124.1| photosystem II
           stability/assembly factor HCF136 [Arabidopsis thaliana]
          Length = 403

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/84 (80%), Positives = 71/84 (84%)
 Frame = -3

Query: 253 DGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXLSKG 74
           DGRYVAVSSRGNF+LTWEPGQPYWQPHNRA+ARRIQNMGWRAD             LSKG
Sbjct: 257 DGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKG 316

Query: 73  TGITEDFEEVPVQSRGFGILDVGY 2
           TGITE+FEEVPVQSRGFGILDVGY
Sbjct: 317 TGITEEFEEVPVQSRGFGILDVGY 340


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic-like [Cucumis sativus]
           gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
           II stability/assembly factor HCF136, chloroplastic-like
           [Cucumis sativus]
          Length = 406

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/84 (80%), Positives = 71/84 (84%)
 Frame = -3

Query: 253 DGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXLSKG 74
           DGRYVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWRAD             LSKG
Sbjct: 260 DGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKG 319

Query: 73  TGITEDFEEVPVQSRGFGILDVGY 2
           TGI+E+FEEVPVQSRGFGILDVGY
Sbjct: 320 TGISEEFEEVPVQSRGFGILDVGY 343


>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Vitis vinifera]
           gi|297737938|emb|CBI27139.3| unnamed protein product
           [Vitis vinifera]
          Length = 404

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/84 (79%), Positives = 70/84 (83%)
 Frame = -3

Query: 253 DGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXLSKG 74
           DG YVAVSSRGNFYLTWEPGQPYWQPHNRA+ARRIQNMGWRAD             LSKG
Sbjct: 258 DGSYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKG 317

Query: 73  TGITEDFEEVPVQSRGFGILDVGY 2
           TGI+EDFEE+PVQSRGFGILDVGY
Sbjct: 318 TGISEDFEEIPVQSRGFGILDVGY 341


>gb|AFW75693.1| plastid high chlorophyll fluorescence 136 Precursor [Zea mays]
          Length = 394

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/84 (79%), Positives = 70/84 (83%)
 Frame = -3

Query: 253 DGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRADXXXXXXXXXXXXXLSKG 74
           DGRYVAVSSRGNFYLTWEPGQP+WQPHNRA+ARRIQNMGWRAD             LS+G
Sbjct: 248 DGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSRG 307

Query: 73  TGITEDFEEVPVQSRGFGILDVGY 2
           TGITEDFEEV VQSRGFGILDVGY
Sbjct: 308 TGITEDFEEVQVQSRGFGILDVGY 331