BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001955
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus ...   261   1e-90
ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   259   5e-90
ref|XP_002308530.1| predicted protein [Populus trichocarpa] gi|1...   258   9e-90
ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   258   2e-89
gb|ACF06499.1| ribosomal protein [Elaeis guineensis]                  256   3e-89

>ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
           gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3,
           putative [Ricinus communis]
          Length = 233

 Score =  261 bits (668), Expect(2) = 1e-90
 Identities = 131/140 (93%), Positives = 136/140 (97%)
 Frame = +3

Query: 258 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 437
           GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD
Sbjct: 96  GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 155

Query: 438 GYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPMPDLVTIHAPK 617
           GYMISSGQPV +YIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTP+PDLVTIH+PK
Sbjct: 156 GYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHSPK 215

Query: 618 DEEEFARPPVMATEVEVPVA 677
           +EE   RPPV+ATEVEVPVA
Sbjct: 216 EEE--LRPPVLATEVEVPVA 233



 Score = 98.6 bits (244), Expect(2) = 1e-90
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 150
           NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 23  NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 72


>ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297738588|emb|CBI27833.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  259 bits (662), Expect(2) = 5e-90
 Identities = 126/140 (90%), Positives = 133/140 (95%)
 Frame = +3

Query: 258 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 437
           GLCA+AQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD
Sbjct: 95  GLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 154

Query: 438 GYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPMPDLVTIHAPK 617
           GYMISSGQPV EYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP TP+PDLVTIH PK
Sbjct: 155 GYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPK 214

Query: 618 DEEEFARPPVMATEVEVPVA 677
           +EEE+ RP  +AT++EVP A
Sbjct: 215 EEEEYIRPEKLATDIEVPTA 234



 Score = 98.6 bits (244), Expect(2) = 5e-90
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 150
           NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 22  NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71


>ref|XP_002308530.1| predicted protein [Populus trichocarpa] gi|118483836|gb|ABK93809.1|
           unknown [Populus trichocarpa]
           gi|118485378|gb|ABK94546.1| unknown [Populus
           trichocarpa] gi|222854506|gb|EEE92053.1| predicted
           protein [Populus trichocarpa]
          Length = 236

 Score =  258 bits (660), Expect(2) = 9e-90
 Identities = 125/140 (89%), Positives = 132/140 (94%)
 Frame = +3

Query: 258 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 437
           GLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKD
Sbjct: 95  GLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKD 154

Query: 438 GYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPMPDLVTIHAPK 617
           GYMISSGQPV EYID+AVRHVLLRQGVLGIKVKIMLDWDPKGK GP TP+PDLVTIH PK
Sbjct: 155 GYMISSGQPVKEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPK 214

Query: 618 DEEEFARPPVMATEVEVPVA 677
           +EEE+  PPVM T +E+PVA
Sbjct: 215 EEEEYVAPPVMTTNIEIPVA 234



 Score = 98.6 bits (244), Expect(2) = 9e-90
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 150
           NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 22  NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71


>ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297743020|emb|CBI35887.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  258 bits (658), Expect(2) = 2e-89
 Identities = 125/140 (89%), Positives = 132/140 (94%)
 Frame = +3

Query: 258 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 437
           GLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKD
Sbjct: 95  GLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKD 154

Query: 438 GYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPMPDLVTIHAPK 617
           GYMISSGQPV EYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP TP+PDLVTIH PK
Sbjct: 155 GYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPK 214

Query: 618 DEEEFARPPVMATEVEVPVA 677
           +EEE+ RPP+ A ++EV  A
Sbjct: 215 EEEEYLRPPIPAADIEVAAA 234



 Score = 98.6 bits (244), Expect(2) = 2e-89
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 150
           NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 22  NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71


>gb|ACF06499.1| ribosomal protein [Elaeis guineensis]
          Length = 235

 Score =  256 bits (655), Expect(2) = 3e-89
 Identities = 127/141 (90%), Positives = 133/141 (94%), Gaps = 1/141 (0%)
 Frame = +3

Query: 258 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 437
           GLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKD
Sbjct: 95  GLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKD 154

Query: 438 GYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPMPDLVTIHAPK 617
           GYMIS GQPV EYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP TP+PDL +IH PK
Sbjct: 155 GYMISCGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPATPLPDLASIHTPK 214

Query: 618 DEEEFARPPV-MATEVEVPVA 677
           DEEE+ RPP+ MA E+EVPVA
Sbjct: 215 DEEEYMRPPLTMAPELEVPVA 235



 Score = 98.6 bits (244), Expect(2) = 3e-89
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 150
           NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 22  NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71