BLASTX nr result
ID: Dioscorea21_contig00001938
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00001938
(867 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004149702.1| PREDICTED: U-box domain-containing protein 4... 366 e-106
ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2... 361 e-106
ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ... 366 e-106
ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2... 361 e-105
dbj|BAJ92958.1| predicted protein [Hordeum vulgare subsp. vulgare] 358 e-104
>ref|XP_004149702.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
gi|449524872|ref|XP_004169445.1| PREDICTED: U-box
domain-containing protein 4-like [Cucumis sativus]
Length = 841
Score = 366 bits (939), Expect(2) = e-106
Identities = 194/210 (92%), Positives = 200/210 (95%)
Frame = +1
Query: 7 LVGLLQSTDQKIQENAVTALLNLSINDNNKTAIANAEAIDPLIHVLETGNAEAKENSAAT 186
LVGLL S D KIQENAVTALLNLSINDNNK+AIA A AI+PLIHVL+TG+ EAKENSAAT
Sbjct: 603 LVGLLLSEDSKIQENAVTALLNLSINDNNKSAIAQANAIEPLIHVLKTGSPEAKENSAAT 662
Query: 187 LFSLSVIEENKVKIGRSGAIRPLVELLGSGTPRGKKDAATALFNLSIFHENKARIVQAGA 366
LFSLSVIEENKVKIGRSGAI PLVELLG+GTPRGKKDAATALFNLSIFHENKARIVQAGA
Sbjct: 663 LFSLSVIEENKVKIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSIFHENKARIVQAGA 722
Query: 367 VRHLVELMDPAAGMVDKAVAVLANLATIPEGRTAIGHEGGIPVLVEVVELGSARGKENAA 546
VRHLVELMDPAAGMVDKAVAVLANLATIPEGR+AIG EGGIPVLVEVVELGSARGKENAA
Sbjct: 723 VRHLVELMDPAAGMVDKAVAVLANLATIPEGRSAIGQEGGIPVLVEVVELGSARGKENAA 782
Query: 547 AALLQLCTTSNRFCSQVLQEGAVPPLVALS 636
AALLQLCTTSNR CS VLQEGAVPPLVALS
Sbjct: 783 AALLQLCTTSNRHCSMVLQEGAVPPLVALS 812
Score = 47.8 bits (112), Expect(2) = e-106
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +3
Query: 717 TPRAKEKAQSLLTYFRSQRHGNAGRG 794
T RAKEKAQ+LL++FRSQRHGN+GRG
Sbjct: 816 TARAKEKAQALLSHFRSQRHGNSGRG 841
>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
predicted protein [Populus trichocarpa]
Length = 698
Score = 361 bits (927), Expect(2) = e-106
Identities = 188/211 (89%), Positives = 201/211 (95%)
Frame = +1
Query: 4 LLVGLLQSTDQKIQENAVTALLNLSINDNNKTAIANAEAIDPLIHVLETGNAEAKENSAA 183
LLV LL STD+KIQENAVTALLNLSINDNNKTAIANA+AI+PLIHVLETG+ EAKENSAA
Sbjct: 460 LLVNLLCSTDKKIQENAVTALLNLSINDNNKTAIANADAIEPLIHVLETGSPEAKENSAA 519
Query: 184 TLFSLSVIEENKVKIGRSGAIRPLVELLGSGTPRGKKDAATALFNLSIFHENKARIVQAG 363
TLFSLSVIE+NKV+IGRSGA+ PLV+LLG+GTPRGKKDAATALFNLSIFHENKARIV+AG
Sbjct: 520 TLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTPRGKKDAATALFNLSIFHENKARIVEAG 579
Query: 364 AVRHLVELMDPAAGMVDKAVAVLANLATIPEGRTAIGHEGGIPVLVEVVELGSARGKENA 543
AV+HLV+LMDPAAGMVDKAVAVLANLATIPEGR AIG EGGIPVLVEVVELGS RGKENA
Sbjct: 580 AVKHLVDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPVLVEVVELGSVRGKENA 639
Query: 544 AAALLQLCTTSNRFCSQVLQEGAVPPLVALS 636
AAALLQLCT S+RFC VLQEGAVPPLVALS
Sbjct: 640 AAALLQLCTNSSRFCHMVLQEGAVPPLVALS 670
Score = 51.6 bits (122), Expect(2) = e-106
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +3
Query: 717 TPRAKEKAQSLLTYFRSQRHGNAGR 791
TPRAKEKAQSLL+YFR+QRHGNAGR
Sbjct: 674 TPRAKEKAQSLLSYFRNQRHGNAGR 698
>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 799
Score = 366 bits (940), Expect(2) = e-106
Identities = 191/211 (90%), Positives = 202/211 (95%)
Frame = +1
Query: 4 LLVGLLQSTDQKIQENAVTALLNLSINDNNKTAIANAEAIDPLIHVLETGNAEAKENSAA 183
+LV LL+S D KIQENAVTALLNLSINDNNKTAIANA+AI PLIHVLETG+ EAKENSAA
Sbjct: 561 ILVNLLRSADAKIQENAVTALLNLSINDNNKTAIANADAIGPLIHVLETGSPEAKENSAA 620
Query: 184 TLFSLSVIEENKVKIGRSGAIRPLVELLGSGTPRGKKDAATALFNLSIFHENKARIVQAG 363
TLFSLSVIE+NKV+IGRSGA+ PLV+LLG+GTPRGKKDAATALFNLSIFHENKARIVQAG
Sbjct: 621 TLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTPRGKKDAATALFNLSIFHENKARIVQAG 680
Query: 364 AVRHLVELMDPAAGMVDKAVAVLANLATIPEGRTAIGHEGGIPVLVEVVELGSARGKENA 543
AV+HLVELMDPAAGMVDKAVAVLANLATIPEGRTAIG EGGIPVLVEVVELGSARGKENA
Sbjct: 681 AVKHLVELMDPAAGMVDKAVAVLANLATIPEGRTAIGQEGGIPVLVEVVELGSARGKENA 740
Query: 544 AAALLQLCTTSNRFCSQVLQEGAVPPLVALS 636
AAALLQLCT SNRFC+ VLQEGAVPPLVALS
Sbjct: 741 AAALLQLCTNSNRFCNTVLQEGAVPPLVALS 771
Score = 44.7 bits (104), Expect(2) = e-106
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +3
Query: 717 TPRAKEKAQSLLTYFRSQRHGNA 785
TPRAKEKAQ+LL++FR+QRHGNA
Sbjct: 775 TPRAKEKAQALLSFFRNQRHGNA 797
Score = 56.6 bits (135), Expect = 7e-06
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 ENAVTALLNLSINDNNKTAIANAEAIDPLIHVLETGNAEAKENSAATLFSLSVIEENKVK 225
+ AV L NL+ +TAI I L+ V+E G+A KEN+AA L L
Sbjct: 697 DKAVAVLANLATIPEGRTAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCN 756
Query: 226 -IGRSGAIRPLVELLGSGTPRGKKDAATAL 312
+ + GA+ PLV L SGTPR K+ A L
Sbjct: 757 TVLQEGAVPPLVALSQSGTPRAKEKAQALL 786
>ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1|
predicted protein [Populus trichocarpa]
Length = 822
Score = 361 bits (927), Expect(2) = e-105
Identities = 190/211 (90%), Positives = 200/211 (94%)
Frame = +1
Query: 4 LLVGLLQSTDQKIQENAVTALLNLSINDNNKTAIANAEAIDPLIHVLETGNAEAKENSAA 183
LLV LL+STD KIQENAVTALLNLSINDNNKTAI NA+AI+PLIHVLETG+ EAKENSAA
Sbjct: 583 LLVNLLRSTDIKIQENAVTALLNLSINDNNKTAIGNADAIEPLIHVLETGSPEAKENSAA 642
Query: 184 TLFSLSVIEENKVKIGRSGAIRPLVELLGSGTPRGKKDAATALFNLSIFHENKARIVQAG 363
TLFSLSVIE+NKV+IGRSGAI PLV+LLG+GTPRGKKDAATALFNLSIFHENK RIVQAG
Sbjct: 643 TLFSLSVIEDNKVRIGRSGAIVPLVDLLGNGTPRGKKDAATALFNLSIFHENKDRIVQAG 702
Query: 364 AVRHLVELMDPAAGMVDKAVAVLANLATIPEGRTAIGHEGGIPVLVEVVELGSARGKENA 543
AV+HLVELMDPAAGMVDKAVAVLANLATIPEGR AIG EGGIPVLVEVVELGSARGKENA
Sbjct: 703 AVKHLVELMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPVLVEVVELGSARGKENA 762
Query: 544 AAALLQLCTTSNRFCSQVLQEGAVPPLVALS 636
AAALLQLCT S+RFC VLQEGAVPPLVALS
Sbjct: 763 AAALLQLCTNSSRFCHMVLQEGAVPPLVALS 793
Score = 48.9 bits (115), Expect(2) = e-105
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = +3
Query: 717 TPRAKEKAQSLLTYFRSQRHGNAGR 791
TPRAKEKAQ+LL++FR+QRHGNAGR
Sbjct: 797 TPRAKEKAQALLSFFRNQRHGNAGR 821
>dbj|BAJ92958.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 831
Score = 358 bits (918), Expect(2) = e-104
Identities = 188/211 (89%), Positives = 198/211 (93%)
Frame = +1
Query: 4 LLVGLLQSTDQKIQENAVTALLNLSINDNNKTAIANAEAIDPLIHVLETGNAEAKENSAA 183
LLVGLL S+D KIQENAVTALLNLSINDNNK AIA+A+A+DPLIHVLETGN EAKENSAA
Sbjct: 592 LLVGLLHSSDAKIQENAVTALLNLSINDNNKIAIASADAVDPLIHVLETGNPEAKENSAA 651
Query: 184 TLFSLSVIEENKVKIGRSGAIRPLVELLGSGTPRGKKDAATALFNLSIFHENKARIVQAG 363
TLFSLSVIEENKV+IGRSGA++PLV+LLG+GTPRGKKDAATALFNLSI HENK RIVQA
Sbjct: 652 TLFSLSVIEENKVRIGRSGAVKPLVDLLGNGTPRGKKDAATALFNLSILHENKGRIVQAD 711
Query: 364 AVRHLVELMDPAAGMVDKAVAVLANLATIPEGRTAIGHEGGIPVLVEVVELGSARGKENA 543
AVR+LVELMDPAAGMVDKAVAVLANLATIPEGRTAIG GIP LVEVVELGSARGKENA
Sbjct: 712 AVRYLVELMDPAAGMVDKAVAVLANLATIPEGRTAIGQARGIPALVEVVELGSARGKENA 771
Query: 544 AAALLQLCTTSNRFCSQVLQEGAVPPLVALS 636
AAALLQLCT SNRFCS VLQEGAVPPLVALS
Sbjct: 772 AAALLQLCTNSNRFCSIVLQEGAVPPLVALS 802
Score = 47.0 bits (110), Expect(2) = e-104
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +3
Query: 717 TPRAKEKAQSLLTYFRSQRHGNAGR 791
TPRA+EKAQ+LL+YFRSQRHGN+ R
Sbjct: 806 TPRAREKAQALLSYFRSQRHGNSAR 830
Score = 61.2 bits (147), Expect = 3e-07
Identities = 41/103 (39%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +1
Query: 46 ENAVTALLNLSINDNNKTAIANAEAIDPLIHVLETGNAEAKENSAATLFSLSVIEENKVK 225
+ AV L NL+ +TAI A I L+ V+E G+A KEN+AA L L
Sbjct: 728 DKAVAVLANLATIPEGRTAIGQARGIPALVEVVELGSARGKENAAAALLQLCTNSNRFCS 787
Query: 226 IG-RSGAIRPLVELLGSGTPRGKKDAATAL-FNLSIFHENKAR 348
I + GA+ PLV L SGTPR ++ A L + S H N AR
Sbjct: 788 IVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRSQRHGNSAR 830