BLASTX nr result

ID: Dioscorea21_contig00001933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001933
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285601.1| PREDICTED: uncharacterized protein LOC100255...   153   7e-35
gb|AFW73976.1| hypothetical protein ZEAMMB73_075412 [Zea mays]        120   9e-25
ref|XP_002453015.1| hypothetical protein SORBIDRAFT_04g036760 [S...   115   2e-23
gb|EAY87952.1| hypothetical protein OsI_09374 [Oryza sativa Indi...   113   8e-23
ref|NP_001167762.1| uncharacterized protein LOC100381453 [Zea ma...   113   1e-22

>ref|XP_002285601.1| PREDICTED: uncharacterized protein LOC100255721 [Vitis vinifera]
          Length = 462

 Score =  153 bits (387), Expect = 7e-35
 Identities = 121/328 (36%), Positives = 152/328 (46%), Gaps = 48/328 (14%)
 Frame = +1

Query: 1    KSDRQWFVDALNSVXXXXXXXXXXXXXXXES-PDYLFGLDKGFIPPPAIKVKDPSQEFAP 177
            KS+RQWFVDALNSV               E+ PD+LFGLDKG  PPP +K++DP+     
Sbjct: 152  KSERQWFVDALNSVQIQPLEGSSPQAAASETNPDFLFGLDKGLAPPPPVKLQDPT----- 206

Query: 178  PVEHAHPPPTRSEI----------PKNDDRAIGAE---QPVEVQRQIPELQRLQIAENQD 318
                  PPPT  ++          P ++DR +  +    P + QRQI ELQRLQIA +Q+
Sbjct: 207  ------PPPTVPDVLPKDYSVRSDPGSEDRHVVGDPVVSPADYQRQIQELQRLQIA-SQE 259

Query: 319  QPAFQRQASDENLSRVYPAEYYIPQRVQENTPPAP-------PPVYWQEHLGMAAGGRFA 477
            Q  FQR+ +DE+ +R YPAEYY  Q++ E   PAP       P  YW E      G   A
Sbjct: 260  QAMFQRK-NDESNTRAYPAEYY-AQKIPEKLAPAPQQMPVSIPATYWPERHMTTGGYPVA 317

Query: 478  SVAGGDRPVYFIPAGPGMYQQQGAVIHPQAG---QGYYAM---------APPPRMVPSPA 621
            +  G ++ VY I    G+YQ  G  + P  G   Q YY M          P       P 
Sbjct: 318  ASTGTEQSVYLIHTSAGVYQTPG--LRPMTGQLAQPYYGMQRVVSDVYREPQVYNAAPPH 375

Query: 622  QEMYRDXXXXXXXXXXXXXDGGAVRTQGHDAGFTAYDGAGRAVYYT---GAAPTYQTVT- 789
            Q+                  G  V  QG+      YD  GR VYYT   GAAP+YQ VT 
Sbjct: 376  QQQKVGAYGEGMGMMRPSASGVGVTEQGY--AQVTYDSTGRQVYYTTPGGAAPSYQAVTT 433

Query: 790  ----------NVAFNPDGKIV-KPSQVS 840
                       V  N DGK+V K SQ S
Sbjct: 434  AAAQGDVRQGGVTINQDGKVVAKTSQGS 461


>gb|AFW73976.1| hypothetical protein ZEAMMB73_075412 [Zea mays]
          Length = 548

 Score =  120 bits (300), Expect = 9e-25
 Identities = 100/292 (34%), Positives = 124/292 (42%), Gaps = 52/292 (17%)
 Frame = +1

Query: 94   PDYLFGLDKGFIPPPAIKVKDPSQEFAPPVEHAHPPPTRSEIP-----KNDDR------- 237
            PDYLFGLD GF+PPPA+KVKDP+ +         PP  R  +P     KNDDR       
Sbjct: 274  PDYLFGLDNGFVPPPAVKVKDPAGD---------PPTVRENVPVEIPAKNDDRHPNPAGD 324

Query: 238  ---AIGAEQPVEVQRQIPELQRLQIAEN-QDQP----------------AFQRQASDENL 357
                     P E QRQI EL++LQ+A+N   QP                A  R  SD++L
Sbjct: 325  HVAVSPVVSPAEYQRQIQELEKLQVADNATHQPPPPATAPAPTHGPVPAALPRNGSDDSL 384

Query: 358  SRVYP---------AEYYIPQRVQENTPP----APPPVYWQEHLGMAAGGRFASVAGGD- 495
            +R YP         AEYYIP+  ++   P    APPP  +     +   GR+ASVA G  
Sbjct: 385  ARAYPPVTATPTSNAEYYIPKFPEKPPVPPLSSAPPPTTY-----VQVQGRYASVAPGSG 439

Query: 496  ---RPVYFIPAGPGMY---QQQGAVIHPQAGQGYYAMAPPPRMVPSPAQEMYRDXXXXXX 657
                PV+FIPA  G +      GA  +P      YA+APP       A            
Sbjct: 440  ADHAPVFFIPAPHGYFAAAASPGATSYP----AVYAVAPPSATANGSAPSAVVSNATAY- 494

Query: 658  XXXXXXXDGGAVRTQGHDAGFTAYDGAGRAVYYTGAAPTYQTVTNVAFNPDG 813
                         TQ       AYD  GRA+YYT   P Y +  N    P G
Sbjct: 495  ---------APAPTQ------VAYDSNGRAIYYTSMLPQYPSAVNGMSAPGG 531


>ref|XP_002453015.1| hypothetical protein SORBIDRAFT_04g036760 [Sorghum bicolor]
           gi|241932846|gb|EES05991.1| hypothetical protein
           SORBIDRAFT_04g036760 [Sorghum bicolor]
          Length = 499

 Score =  115 bits (288), Expect = 2e-23
 Identities = 100/297 (33%), Positives = 125/297 (42%), Gaps = 63/297 (21%)
 Frame = +1

Query: 91  SPDYLFGLDKGFIPPPAIKVKDPSQEFAPPVEHAHPPPTRSEIP-----KNDDRAIGAE- 252
           SPDYLFGLD GF+PPPA+KVKDP+ +         PP  R  +P     KNDDR      
Sbjct: 214 SPDYLFGLDNGFVPPPAVKVKDPAGD---------PPTVRENVPVEIAAKNDDRHPNPNA 264

Query: 253 ----------QPVEVQRQIPELQRLQIAENQD-QP----------------------AFQ 333
                      P + QRQI EL++LQ+A+N   QP                      A  
Sbjct: 265 GDHVAVSPVVSPAKYQRQIQELEKLQVADNATHQPPPPAAAPAPAPAPSLVPVPVPAALP 324

Query: 334 RQASDENLSRVYP---------AEYYIPQRVQENTPPAPPPVYWQEHLG-MAAGGRFASV 483
           R  SD++L+R YP         AEYY+P+  ++  PP PPP         +   GR+ASV
Sbjct: 325 RNGSDDSLTRAYPPATATPTANAEYYLPKFPEK--PPVPPPSSAPPATAYLQVQGRYASV 382

Query: 484 AGGDR----PVYFIPAGPGMYQ---QQGAVIHPQAGQGYYAMAPPPRMV-------PSPA 621
           A G      PV+FIPA  G +      GA  +P      YA+APP           PSPA
Sbjct: 383 APGSGADHGPVFFIPAPHGYFAATASPGATSYPAV----YAVAPPSATPTANGSAPPSPA 438

Query: 622 QEMYRDXXXXXXXXXXXXXDGGAVRTQGHDAGFTAYDGAGRAVYYTGAAPTYQTVTN 792
                                    TQ       AYD  GRA+YYT   P Y +  N
Sbjct: 439 VSSATAY--------------APAPTQ------VAYDSNGRAIYYTSMLPQYPSAVN 475


>gb|EAY87952.1| hypothetical protein OsI_09374 [Oryza sativa Indica Group]
          Length = 507

 Score =  113 bits (283), Expect = 8e-23
 Identities = 103/334 (30%), Positives = 128/334 (38%), Gaps = 70/334 (20%)
 Frame = +1

Query: 1    KSDRQWFVDALNSVXXXXXXXXXXXXXXXES-----------------------PDYLFG 111
            +  RQWFVDALNSV                S                       PDYLFG
Sbjct: 176  QEQRQWFVDALNSVHQPPPPSPPQPKQESVSVQSPPPAVVPMPQPPPVLTAPTGPDYLFG 235

Query: 112  LDKGFIPPPAIKVKDPSQEFAPPVEHAHPPPTRSEIP-KNDDR-----------AIGAEQ 255
            LD GF+PPPA+KVKDP+ +  PP    + P    EIP KNDDR                 
Sbjct: 236  LDNGFVPPPAVKVKDPAGD--PPTVKDNVP---VEIPAKNDDRHTTNPVSDHVVVSPVVS 290

Query: 256  PVEVQRQIPELQRLQIAENQDQ---------------PAFQRQASDENLSRVYP------ 372
            P E QRQI  L++LQ A+   Q                A  R  SD++L+R YP      
Sbjct: 291  PGEFQRQIQGLEKLQFADTAAQQPPPPPAPATAAPPPAALPRNGSDDSLTRAYPPATVTP 350

Query: 373  ------AEYYIPQRVQENTPP----APPPVYWQEHLGMAAGGRFASVAGGD----RPVYF 510
                   EYY+P+  ++   P    APPP  +     +   GR+ SVA G      PV+F
Sbjct: 351  TPPTATPEYYLPKYQEKPAAPPPSSAPPPTAF-----LPVPGRYTSVAPGSGADHAPVFF 405

Query: 511  IPAGPGMYQQQGAVIHPQAGQGYYAMAPPPRMVPSPAQEMYRDXXXXXXXXXXXXXDGGA 690
            IPA P                GY+  A  P     PA                      A
Sbjct: 406  IPAPP---------------HGYFTTAAGPGATSFPAVYAVAQHNGNANASGNGPSPAAA 450

Query: 691  VRTQGHDAGFTAYDGAGRAVYYTGAAPTYQTVTN 792
               Q + A   AYD  GRA+YYT   P Y +  +
Sbjct: 451  SNAQAY-APQVAYDSNGRAIYYTSVLPQYASAVS 483


>ref|NP_001167762.1| uncharacterized protein LOC100381453 [Zea mays]
            gi|223943829|gb|ACN25998.1| unknown [Zea mays]
            gi|224034085|gb|ACN36118.1| unknown [Zea mays]
            gi|413924105|gb|AFW64037.1| hypothetical protein
            ZEAMMB73_108732 [Zea mays]
          Length = 538

 Score =  113 bits (282), Expect = 1e-22
 Identities = 100/291 (34%), Positives = 124/291 (42%), Gaps = 57/291 (19%)
 Frame = +1

Query: 91   SPDYLFGLDKGFIPPPAIKVKDPSQEFAPPVEHAHPPPTRSEIP-----KNDDR-----A 240
            SPDYLFGLD GF+ PPA+KVKDP+ +         PP  R  +P     KN+DR      
Sbjct: 259  SPDYLFGLDNGFVHPPAVKVKDPAGD---------PPAVRESVPVELPAKNEDRHPIPNP 309

Query: 241  IG---AEQPVEVQRQIPELQRLQIAEN-QDQP--------------------AFQRQASD 348
             G   A  P E QRQIP L++LQ+A+N   QP                    A  R  SD
Sbjct: 310  AGDNVAVSPAEYQRQIPGLEKLQVADNAAHQPPPPAPAPAPAPSLAPTPVPAALPRNGSD 369

Query: 349  ENLSRVYP---------AEYYIPQRVQENTPP-------APPPVYWQEHLGMAAGGRFAS 480
            ++L+R YP         AEYY+P+  ++   P        PPP Y Q        GR+ S
Sbjct: 370  DSLTRGYPLATPTPNSSAEYYLPKFPEKPPVPPPPQSSAPPPPTYLQ------VQGRYTS 423

Query: 481  VA---GGDR-PVYFIPAGPGMY---QQQGAVIHPQAGQGYYAMAPPPRMVPSPAQEMYRD 639
            VA   G DR PV+FIPA  G +      GA  +P      YA+APP       A      
Sbjct: 424  VAPGSGADRGPVFFIPAPHGYFAATASPGATSYP----AVYAVAPPSTAANGSAASPAAS 479

Query: 640  XXXXXXXXXXXXXDGGAVRTQGHDAGFTAYDGAGRAVYYTGAAPTYQTVTN 792
                               TQ       AYD  GRA+YYT   P Y +  N
Sbjct: 480  NATAY----------SPAPTQ------VAYDSNGRAIYYTSMLPQYPSAVN 514


Top