BLASTX nr result

ID: Dioscorea21_contig00001912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001912
         (1935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28700.3| unnamed protein product [Vitis vinifera]              525   e-146
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]   510   e-142
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm...   481   e-133
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...   441   e-121
ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2...   420   e-115

>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  525 bits (1353), Expect = e-146
 Identities = 263/404 (65%), Positives = 319/404 (78%), Gaps = 2/404 (0%)
 Frame = -2

Query: 1742 RLIDSTPRELDKELLVEAALEVGXXXXXXXXXXXXXXXXSHNAAAWPLPPDLTVKVFSML 1563
            +L+DS   + D+ LL++ AL +G                 HN+  W LPPDLT+KVFSML
Sbjct: 64   KLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSML 123

Query: 1562 DTRSLCHAAATCSMFNKCAVDPLCYANIDLTAVVPKVNNTVVSTMIQRAGRNLQSLKLGI 1383
            DT+SLC+ AATCSMF+KCA+DPLCYANIDLT VVPKVNN VVSTMIQRAG+ LQSL+LGI
Sbjct: 124  DTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGI 183

Query: 1382 WPSPS-SAEISQSMSYSSRNSIDTSGPSWNEKKPRQGRESSVLSRSCLLALSVDGGAAGA 1206
             P P+ S   SQ + Y+ RNS+D +G SWN+K+ RQG+ESS+LSRSCL ALS D GAAGA
Sbjct: 184  VPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGDSGAAGA 243

Query: 1205 LLKRLHLYNIDKIDGPALCTALSACQSLVDLEVIGLHIELRRTLDAVSTYCHSMKRLFLE 1026
            LLKRLHLYNI+++D  ALC ALSAC SL+DLE++GLH+ELR+TL +VST CH ++RLF E
Sbjct: 244  LLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFE 303

Query: 1025 SSETGRDDSLKSTTCLDLVTGCPNLISLALRGFKLQDHKVKILVKGLHYLKVVDFSTSYS 846
            SS+TGRDDSLKS TC+DLV  CP+L SLALRGFKL D+KV+ILVKG H LK VDFSTSYS
Sbjct: 304  SSKTGRDDSLKSPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKGFHKLKYVDFSTSYS 363

Query: 845  ITGIFLRNLVNGANAPALEVLILRDCLHLKEVEIARFLSAVLGGDCQLLKYLDISNKDGL 666
            ITG FLRNL +      LEVL+LRDC+HLKEVE+A+FLSA++ GD +LL+ LDISN++GL
Sbjct: 364  ITGTFLRNLGSSTGGNLLEVLLLRDCMHLKEVEVAKFLSAIIAGDFRLLRLLDISNREGL 423

Query: 665  SAEEDWNNRCYN-PRIPIMQVLEARPDICLVAEFPQEASFVDIE 537
            ++E DW  RCYN   IPI QV E RPDICL+AEFP E S ++IE
Sbjct: 424  ASEGDWYYRCYNSSMIPIKQVSEERPDICLLAEFPSEGSIIEIE 467


>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
          Length = 603

 Score =  510 bits (1313), Expect = e-142
 Identities = 263/433 (60%), Positives = 319/433 (73%), Gaps = 31/433 (7%)
 Frame = -2

Query: 1742 RLIDSTPRELDKELLVEAALEVGXXXXXXXXXXXXXXXXSHNAAAWPLPPDLTVKVFSML 1563
            +L+DS   + D+ LL++ AL +G                 HN+  W LPPDLT+KVFSML
Sbjct: 64   KLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSML 123

Query: 1562 DTRSLCHAAATCSMFNKCAVDPLCYANIDLTAVVPKVNNTVVSTMIQRAGRNLQSLKLGI 1383
            DT+SLC+ AATCSMF+KCA+DPLCYANIDLT VVPKVNN VVSTMIQRAG+ LQSL+LGI
Sbjct: 124  DTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGI 183

Query: 1382 WPSPS-SAEISQSMSYSSRNSIDTSGPSWNEKKPRQGRESSVLSRSCLLALSVDGGAAGA 1206
             P P+ S   SQ + Y+ RNS+D +G SWN+K+ RQG+ESS+LSRSCL ALS D GAAGA
Sbjct: 184  VPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGDSGAAGA 243

Query: 1205 LLKRLHLYNIDKIDGPALCTALSACQSLVDLEVIGLHIELRRTLDAVSTYCHSMKRLFLE 1026
            LLKRLHLYNI+++D  ALC ALSAC SL+DLE++GLH+ELR+TL +VST CH ++RLF E
Sbjct: 244  LLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFE 303

Query: 1025 SSETGRDDSLKSTTCLDLVTGCPNLISLALRGFKLQDHKVKILVK--------------- 891
            SS+TGRDDSLKS TC+DLV  CP+L SLALRGFKL D+KV+ILVK               
Sbjct: 304  SSKTGRDDSLKSPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKVVVHNFLIGRIVGLR 363

Query: 890  --------------GLHYLKVVDFSTSYSITGIFLRNLVNGANAPALEVLILRDCLHLKE 753
                          G H LK VDFSTSYSITG FLRNL +      LEVL+LRDC+HLKE
Sbjct: 364  HRGEFLIVSALVCMGFHKLKYVDFSTSYSITGTFLRNLGSSTGGNLLEVLLLRDCMHLKE 423

Query: 752  VEIARFLSAVLGGDCQLLKYLDISNKDGLSAEEDWNNRCYN-PRIPIMQVLEARPDICLV 576
            VE+A+FLSA++ GD +LL+ LDISN++GL++E DW  RCYN   IPI QV E RPDICL+
Sbjct: 424  VEVAKFLSAIIAGDFRLLRLLDISNREGLASEGDWYYRCYNSSMIPIKQVSEERPDICLL 483

Query: 575  AEFPQEASFVDIE 537
            AEFP E S ++IE
Sbjct: 484  AEFPSEGSIIEIE 496


>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
            gi|223540114|gb|EEF41691.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 515

 Score =  481 bits (1237), Expect = e-133
 Identities = 244/403 (60%), Positives = 312/403 (77%), Gaps = 2/403 (0%)
 Frame = -2

Query: 1739 LIDSTPRELDKELLVEAALEVGXXXXXXXXXXXXXXXXSHNAAAWPLPPDLTVKVFSMLD 1560
            L++S+P + D+ +L++ AL++G                 HN+  W LPPDLT+KVFSMLD
Sbjct: 59   LLESSPCDSDQSVLIDRALKLGSILLEAGNRSSRKRSSKHNSLTWVLPPDLTIKVFSMLD 118

Query: 1559 TRSLCHAAATCSMFNKCAVDPLCYANIDLTAVVPKVNNTVVSTMIQRAGRNLQSLKLGIW 1380
            T+SLC+AAATCSMF+KCA+DPLCYANIDLT VVPKVNN VVSTMIQRAG++LQSLKLGI 
Sbjct: 119  TQSLCYAAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKSLQSLKLGIV 178

Query: 1379 PSPSSAEIS-QSMSYSSRNSIDTSGPSWNEKKPRQGRESSVLSRSCLLALSVDGGAAGAL 1203
            P P+S+  S +++ YS RNS+D S  SWN+K+ RQG+ESS+L+RSCL +L+ D GAAG L
Sbjct: 179  PGPTSSPGSCETLVYSIRNSVDVSNISWNDKRTRQGKESSILTRSCLYSLTGDSGAAGTL 238

Query: 1202 LKRLHLYNIDKIDGPALCTALSACQSLVDLEVIGLHIELRRTLDAVSTYCHSMKRLFLES 1023
            LKRLHLYNI+++D  +L  ALSAC SL+DLE++GLH+ELR+TL +VS  C  ++RLF ES
Sbjct: 239  LKRLHLYNIERMDNTSLYGALSACPSLLDLEIVGLHVELRQTLVSVSMNCPLIERLFFES 298

Query: 1022 SETGRDDSLKSTTCLDLVTGCPNLISLALRGFKLQDHKVKILVKGLHYLKVVDFSTSYSI 843
            S+TGRD+SLKS TC+DLVT CPNL SLALRGFKL D KV+ILVKG   LK VDFSTSYSI
Sbjct: 299  SKTGRDESLKSPTCVDLVTNCPNLTSLALRGFKLHDCKVRILVKGFRKLKYVDFSTSYSI 358

Query: 842  TGIFLRNLVNGANAPALEVLILRDCLHLKEVEIARFLSAVLGGDCQLLKYLDISNKDGLS 663
            TG FLRNL   +              +L EVE+AR L+AVL GD + L++LD+SN++GL+
Sbjct: 359  TGHFLRNLGGSSGG------------NLLEVEVARLLTAVLTGDFKSLRHLDVSNREGLA 406

Query: 662  AEEDWNNRCYNPR-IPIMQVLEARPDICLVAEFPQEASFVDIE 537
            +E DW +RCY+ R IP+ QVLEARPD+CL+A+FP + SF+D+E
Sbjct: 407  SESDWYHRCYSLRTIPVKQVLEARPDMCLLADFPPDGSFIDVE 449


>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score =  441 bits (1135), Expect = e-121
 Identities = 231/404 (57%), Positives = 284/404 (70%), Gaps = 2/404 (0%)
 Frame = -2

Query: 1742 RLIDSTPRELDKELLVEAALEVGXXXXXXXXXXXXXXXXSHNAAAWPLPPDLTVKVFSML 1563
            +L+DS   + D+ LL++ AL +G                 HN+  W LPPDLT+KVFSML
Sbjct: 64   KLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSML 123

Query: 1562 DTRSLCHAAATCSMFNKCAVDPLCYANIDLTAVVPKVNNTVVSTMIQRAGRNLQSLKLGI 1383
            DT+SLC+ AATCSMF+KCA+DPLCYANIDLT VVPKVNN VVSTMIQRAG+ LQSL+LGI
Sbjct: 124  DTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGI 183

Query: 1382 WPSPS-SAEISQSMSYSSRNSIDTSGPSWNEKKPRQGRESSVLSRSCLLALSVDGGAAGA 1206
             P P+ S   SQ + Y+ RNS+D +G SWN+K+ RQG+ESS+LSRSCL ALS D GAAGA
Sbjct: 184  VPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGDSGAAGA 243

Query: 1205 LLKRLHLYNIDKIDGPALCTALSACQSLVDLEVIGLHIELRRTLDAVSTYCHSMKRLFLE 1026
            LLKRLHLYNI+++D  ALC ALSAC SL+DLE++GLH+ELR+TL +VST CH ++RLF E
Sbjct: 244  LLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFE 303

Query: 1025 SSETGRDDSLKSTTCLDLVTGCPNLISLALRGFKLQDHKVKILVKGLHYLKVVDFSTSYS 846
            SS+TGRDDSLKS TC+DLV  CP+L SLALRGFKL D+KV+ILVK               
Sbjct: 304  SSKTGRDDSLKSPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVK--------------- 348

Query: 845  ITGIFLRNLVNGANAPALEVLILRDCLHLKEVEIARFLSAVLGGDCQLLKYLDISNKDGL 666
                                           VE+A+FLSA++ GD +LL+ LDISN++GL
Sbjct: 349  -------------------------------VEVAKFLSAIIAGDFRLLRLLDISNREGL 377

Query: 665  SAEEDWNNRCYN-PRIPIMQVLEARPDICLVAEFPQEASFVDIE 537
            ++E DW  RCYN   IPI QV E RPDICL+AEFP E S ++IE
Sbjct: 378  ASEGDWYYRCYNSSMIPIKQVSEERPDICLLAEFPSEGSIIEIE 421


>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
            predicted protein [Populus trichocarpa]
          Length = 676

 Score =  420 bits (1080), Expect = e-115
 Identities = 227/403 (56%), Positives = 280/403 (69%), Gaps = 3/403 (0%)
 Frame = -2

Query: 1739 LIDSTPRELDKELLVEAALEVGXXXXXXXXXXXXXXXXSHNAAAWPLPPDLTVKVFSMLD 1560
            L+DS+P + D+ LL++ AL++G                 HN+  W LPPDLT+K+FSMLD
Sbjct: 64   LLDSSPCDADQSLLIDRALKLGSLLLEAGNRSARKRSSFHNSLTWALPPDLTIKLFSMLD 123

Query: 1559 TRSLCHAAATCSMFNKCAVDPLCYANIDLTAVVPKVNNTVVSTMIQRAGRNLQSLKLGIW 1380
             +SLC+AAATCSMF KCA+DPLCYANIDLT VVPKVNN VVSTMIQRAG+ L+SLKLGI 
Sbjct: 124  AQSLCYAAATCSMFYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALRSLKLGIV 183

Query: 1379 PSPSSAEIS-QSMSYSSRNSIDTSGPSWNEKKPRQGRESSVLSRSCLLALSVDGGAAGAL 1203
            P P+    S Q + Y  RN+++ S  SWN+KK RQG+ESS L+R CL  LS + GAAGA+
Sbjct: 184  PGPTLPHGSCQPLVYGIRNAVEVSNFSWNDKKTRQGKESSTLTRYCLTPLSGENGAAGAV 243

Query: 1202 LKRLHLYNIDKIDGPALCTALSACQSLVDLEVIGLHIELRRTLDAVSTYCHSMKRLFLES 1023
            L+ LHLYNI++ID  +LC ALSAC SL+DLE+IGLH++LR+TL +VS  C  ++RLF ES
Sbjct: 244  LRGLHLYNIERIDNTSLCGALSACPSLLDLEIIGLHVDLRQTLVSVSMNCPLIERLFFES 303

Query: 1022 SETGRDDSLKSTTCLDLVTGCPNLISLALRGFKLQDHKVKILVKGLHYLKVVDFSTSYSI 843
            S+TGRDDSLKS+TC+DLV  CPNL SLALRGFKL D+K++ILVKG   LK VDFSTSYSI
Sbjct: 304  SKTGRDDSLKSSTCVDLVNNCPNLTSLALRGFKLYDYKLRILVKGFCKLKYVDFSTSYSI 363

Query: 842  TGIFLRNLVNGANAPALEVLILRDCLHLKEVEIARFLSAVLGGDCQLLKYL-DISNKDGL 666
            TG FL                          ++  +L   L G       L DISN++GL
Sbjct: 364  TGSFL------------------------SWKLLDYLHQFLLGTLDFFDILWDISNREGL 399

Query: 665  SAEEDWNNRCYN-PRIPIMQVLEARPDICLVAEFPQEASFVDI 540
            +A  D   RCY+   IP  QVLE RPDICL+AEFP E SFVD+
Sbjct: 400  AAAGDSYGRCYSLSIIPTKQVLEERPDICLLAEFPSEGSFVDL 442


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