BLASTX nr result
ID: Dioscorea21_contig00001911
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00001911
(1630 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming]... 320 e-167
ref|XP_002320625.1| predicted protein [Populus trichocarpa] gi|2... 314 e-164
ref|NP_001047463.1| Os02g0621700 [Oryza sativa Japonica Group] g... 310 e-164
ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming]... 308 e-163
gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [So... 311 e-163
>ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Vitis vinifera]
gi|147782941|emb|CAN72294.1| hypothetical protein
VITISV_037293 [Vitis vinifera]
gi|297744178|emb|CBI37148.3| unnamed protein product
[Vitis vinifera]
Length = 423
Score = 320 bits (821), Expect(3) = e-167
Identities = 160/170 (94%), Positives = 166/170 (97%)
Frame = +3
Query: 360 VNEMYFAITLDRTSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFKGITDEDAAKVV 539
VNEMYFAITLDR+SAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVF+GITDEDAAKVV
Sbjct: 140 VNEMYFAITLDRSSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFQGITDEDAAKVV 199
Query: 540 DGLAPKVADRNTAIEQVKKLYKLFCESDCTLLEINPIAETADNQLVAADAKLNFDDNGAF 719
DGLAPKVADRN +IEQVKKLYKLFCE DCTLLEINPIAET+DNQLVAADAKLNFDDN AF
Sbjct: 200 DGLAPKVADRNASIEQVKKLYKLFCECDCTLLEINPIAETSDNQLVAADAKLNFDDNAAF 259
Query: 720 RQKEIFALRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD 869
RQK IFALRD++QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD
Sbjct: 260 RQKHIFALRDATQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD 309
Score = 168 bits (426), Expect(3) = e-167
Identities = 87/93 (93%), Positives = 91/93 (97%)
Frame = +2
Query: 986 ASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVSLKVPVIVRLEGT 1165
ASE QVVEAFKILT+DDKVKAILVNIFGGIMKCD+IASGIVNAAK+VSLKVPV+VRLEGT
Sbjct: 328 ASESQVVEAFKILTADDKVKAILVNIFGGIMKCDIIASGIVNAAKEVSLKVPVVVRLEGT 387
Query: 1166 NVDQGKRILKESGMTLITAEDLDDAAEKAVKAS 1264
NVDQGKRILKESGM LITAEDLDDAAEKAVKAS
Sbjct: 388 NVDQGKRILKESGMALITAEDLDDAAEKAVKAS 420
Score = 150 bits (380), Expect(3) = e-167
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +2
Query: 2 QGAELMGKYGINVPKGVAVASVEEVRKAVKDVFPNEKEVVVKSQILAGGRGLGTFKSGLK 181
QGAELM KYGINVPKGVAV S+EEVRK ++DVFP E E+VVKSQILAGGRGLGTFKSGLK
Sbjct: 34 QGAELMSKYGINVPKGVAVGSIEEVRKTIQDVFPKENELVVKSQILAGGRGLGTFKSGLK 93
Query: 182 GGVHIVKAEEVEDLAGNMLGQILVTKQT 265
GGVHIVK ++VE+LAG MLGQILVTKQT
Sbjct: 94 GGVHIVKTDQVEELAGKMLGQILVTKQT 121
>ref|XP_002320625.1| predicted protein [Populus trichocarpa] gi|222861398|gb|EEE98940.1|
predicted protein [Populus trichocarpa]
Length = 421
Score = 314 bits (805), Expect(3) = e-164
Identities = 156/170 (91%), Positives = 163/170 (95%)
Frame = +3
Query: 360 VNEMYFAITLDRTSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFKGITDEDAAKVV 539
VNEMYFAI LDRTSAGP+IIAC+KGGTSIEDLAEKFPD+I+KVPIDVFKGITDEDAAKVV
Sbjct: 139 VNEMYFAIMLDRTSAGPLIIACKKGGTSIEDLAEKFPDLIIKVPIDVFKGITDEDAAKVV 198
Query: 540 DGLAPKVADRNTAIEQVKKLYKLFCESDCTLLEINPIAETADNQLVAADAKLNFDDNGAF 719
DGLAPKVADRN +IEQVKKLYKLFCE DCTLLEINPIAET+D QLVAADAKLNFDDN AF
Sbjct: 199 DGLAPKVADRNNSIEQVKKLYKLFCECDCTLLEINPIAETSDKQLVAADAKLNFDDNAAF 258
Query: 720 RQKEIFALRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD 869
RQKEIFALRD +QEDPREVAAA ADLNYIGLDGEIGCMVNGAGLAMATMD
Sbjct: 259 RQKEIFALRDPTQEDPREVAAAMADLNYIGLDGEIGCMVNGAGLAMATMD 308
Score = 171 bits (433), Expect(3) = e-164
Identities = 89/94 (94%), Positives = 93/94 (98%)
Frame = +2
Query: 986 ASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVSLKVPVIVRLEGT 1165
ASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQV+LKVPV+VRLEGT
Sbjct: 327 ASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGT 386
Query: 1166 NVDQGKRILKESGMTLITAEDLDDAAEKAVKASS 1267
NVDQGKRILKESGM LITAEDLDDAA+KAVKAS+
Sbjct: 387 NVDQGKRILKESGMALITAEDLDDAAKKAVKASA 420
Score = 143 bits (361), Expect(3) = e-164
Identities = 67/88 (76%), Positives = 82/88 (93%)
Frame = +2
Query: 2 QGAELMGKYGINVPKGVAVASVEEVRKAVKDVFPNEKEVVVKSQILAGGRGLGTFKSGLK 181
QGAELMGKYG+NVPKGVAV+S++EV+KA++DVFP E E+VVKSQ+LAGGRGLG FK+G +
Sbjct: 33 QGAELMGKYGVNVPKGVAVSSLDEVKKAIQDVFPGESELVVKSQVLAGGRGLGKFKNGFQ 92
Query: 182 GGVHIVKAEEVEDLAGNMLGQILVTKQT 265
GGVHIVKA+++E+ AG MLGQILVTKQT
Sbjct: 93 GGVHIVKADKIEETAGKMLGQILVTKQT 120
>ref|NP_001047463.1| Os02g0621700 [Oryza sativa Japonica Group]
gi|75261432|sp|Q6K9N6.1|SUCB_ORYSJ RecName:
Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=Succinyl-CoA synthetase
beta chain; Short=SCS-beta; Flags: Precursor
gi|47847769|dbj|BAD21546.1| putative succinyl-CoA ligase
(GDP-forming) beta-chain, mitochondrial precursor [Oryza
sativa Japonica Group] gi|113536994|dbj|BAF09377.1|
Os02g0621700 [Oryza sativa Japonica Group]
gi|125540340|gb|EAY86735.1| hypothetical protein
OsI_08117 [Oryza sativa Indica Group]
gi|125582922|gb|EAZ23853.1| hypothetical protein
OsJ_07569 [Oryza sativa Japonica Group]
gi|215704850|dbj|BAG94878.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 422
Score = 310 bits (793), Expect(3) = e-164
Identities = 150/170 (88%), Positives = 165/170 (97%)
Frame = +3
Query: 360 VNEMYFAITLDRTSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFKGITDEDAAKVV 539
VNEMYFAITLDR +AGP+IIAC KGGTSIEDLAEK+PDMI+KVPIDVFKGITD+DAAKVV
Sbjct: 140 VNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDAAKVV 199
Query: 540 DGLAPKVADRNTAIEQVKKLYKLFCESDCTLLEINPIAETADNQLVAADAKLNFDDNGAF 719
DGLAPK ADR ++IEQ+KKLY+LFC+SDCTLLEINP+AETADN+LVAADAKLNFDDN AF
Sbjct: 200 DGLAPKTADRQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAF 259
Query: 720 RQKEIFALRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD 869
RQKEIFA+RD++QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD
Sbjct: 260 RQKEIFAMRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD 309
Score = 172 bits (437), Expect(3) = e-164
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = +2
Query: 986 ASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVSLKVPVIVRLEGT 1165
ASEGQVVEAFKILTSDD+VKAILVNIFGGIMKCDVIASGIVNAAKQV LKVPV+VRLEGT
Sbjct: 328 ASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLEGT 387
Query: 1166 NVDQGKRILKESGMTLITAEDLDDAAEKAVKAS 1264
NVDQGKRILKESGMTLITAEDLDDAAEKAVKAS
Sbjct: 388 NVDQGKRILKESGMTLITAEDLDDAAEKAVKAS 420
Score = 145 bits (367), Expect(3) = e-164
Identities = 72/88 (81%), Positives = 79/88 (89%)
Frame = +2
Query: 2 QGAELMGKYGINVPKGVAVASVEEVRKAVKDVFPNEKEVVVKSQILAGGRGLGTFKSGLK 181
QGAELMGKYGINVP+G A SVEEV+ +K+VFP+EKE+VVKSQILAGGRGLGTFKSGL+
Sbjct: 34 QGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQILAGGRGLGTFKSGLQ 93
Query: 182 GGVHIVKAEEVEDLAGNMLGQILVTKQT 265
GGVHIVKAEE E LA MLGQILVTKQT
Sbjct: 94 GGVHIVKAEEAESLAAKMLGQILVTKQT 121
>ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Glycine max]
Length = 422
Score = 308 bits (789), Expect(3) = e-163
Identities = 154/170 (90%), Positives = 162/170 (95%)
Frame = +3
Query: 360 VNEMYFAITLDRTSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFKGITDEDAAKVV 539
VNEMYFAITLDRTSAGPIIIAC KGGTSIEDLAEKFPDMI+KVP+DVF+GITDEDAAKVV
Sbjct: 140 VNEMYFAITLDRTSAGPIIIACSKGGTSIEDLAEKFPDMIIKVPVDVFEGITDEDAAKVV 199
Query: 540 DGLAPKVADRNTAIEQVKKLYKLFCESDCTLLEINPIAETADNQLVAADAKLNFDDNGAF 719
DGLA KVADRN +IEQVK LYKLF + DCTLLEINPIAETADNQLVAADAKLNFDDN A+
Sbjct: 200 DGLALKVADRNKSIEQVKNLYKLFVDCDCTLLEINPIAETADNQLVAADAKLNFDDNAAY 259
Query: 720 RQKEIFALRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD 869
RQKEIFALRD++QEDPREV AAKADLNYIGLDGEIGCMVNGAGLAMATMD
Sbjct: 260 RQKEIFALRDTTQEDPREVTAAKADLNYIGLDGEIGCMVNGAGLAMATMD 309
Score = 166 bits (419), Expect(3) = e-163
Identities = 85/93 (91%), Positives = 91/93 (97%)
Frame = +2
Query: 986 ASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVSLKVPVIVRLEGT 1165
ASEGQVVEAFKILT+DDKVKAILVNIFGGIMKCDVIASGIVNAAK+V+LKVPV+VRLEGT
Sbjct: 328 ASEGQVVEAFKILTADDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGT 387
Query: 1166 NVDQGKRILKESGMTLITAEDLDDAAEKAVKAS 1264
NVD GKRILKESGM LITAEDLDDAA+KAVKA+
Sbjct: 388 NVDHGKRILKESGMALITAEDLDDAAQKAVKAA 420
Score = 153 bits (386), Expect(3) = e-163
Identities = 74/88 (84%), Positives = 84/88 (95%)
Frame = +2
Query: 2 QGAELMGKYGINVPKGVAVASVEEVRKAVKDVFPNEKEVVVKSQILAGGRGLGTFKSGLK 181
QGAELM K+G+NVP+GVAV+SVEEVRKA+KD+FPNE E+VVKSQILAGGRGLGTFKSGLK
Sbjct: 34 QGAELMSKHGVNVPRGVAVSSVEEVRKAIKDLFPNENELVVKSQILAGGRGLGTFKSGLK 93
Query: 182 GGVHIVKAEEVEDLAGNMLGQILVTKQT 265
GGVHIVK ++VED+AG MLGQILVTKQT
Sbjct: 94 GGVHIVKTDQVEDIAGKMLGQILVTKQT 121
>gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
Length = 421
Score = 311 bits (798), Expect(3) = e-163
Identities = 152/170 (89%), Positives = 165/170 (97%)
Frame = +3
Query: 360 VNEMYFAITLDRTSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFKGITDEDAAKVV 539
VNEMYF+I LDR +AGP+IIACRKGGTSIEDLAEKFPDMI+KVPIDVFKGI+DEDAAKVV
Sbjct: 140 VNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGISDEDAAKVV 199
Query: 540 DGLAPKVADRNTAIEQVKKLYKLFCESDCTLLEINPIAETADNQLVAADAKLNFDDNGAF 719
DGLAPKVADRN +IEQVKKLY LFCE+DCT+LEINP+AET+DN+LVAADAKLNFDDN A+
Sbjct: 200 DGLAPKVADRNDSIEQVKKLYNLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNAAY 259
Query: 720 RQKEIFALRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD 869
RQKEIF+LRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD
Sbjct: 260 RQKEIFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMD 309
Score = 165 bits (417), Expect(3) = e-163
Identities = 86/92 (93%), Positives = 90/92 (97%)
Frame = +2
Query: 986 ASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVSLKVPVIVRLEGT 1165
A+EGQVVEAFKILT+D+KVKAILVNIFGGIMKCDVIASGIVNAAKQV LKVPVIVRLEGT
Sbjct: 328 ATEGQVVEAFKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVIVRLEGT 387
Query: 1166 NVDQGKRILKESGMTLITAEDLDDAAEKAVKA 1261
NV+QGKRILKESGM LITAEDLDDAAEKAVKA
Sbjct: 388 NVEQGKRILKESGMKLITAEDLDDAAEKAVKA 419
Score = 147 bits (372), Expect(3) = e-163
Identities = 70/88 (79%), Positives = 83/88 (94%)
Frame = +2
Query: 2 QGAELMGKYGINVPKGVAVASVEEVRKAVKDVFPNEKEVVVKSQILAGGRGLGTFKSGLK 181
QGAELMGKYGINVPKGVAVAS++EV+KA++DVFPN+ EVVVKSQ+LAGGRGLGTFK+G +
Sbjct: 34 QGAELMGKYGINVPKGVAVASLDEVKKAIQDVFPNQSEVVVKSQVLAGGRGLGTFKNGFQ 93
Query: 182 GGVHIVKAEEVEDLAGNMLGQILVTKQT 265
GGVHIVKA++ E++A MLGQILVTKQT
Sbjct: 94 GGVHIVKADQAEEIASKMLGQILVTKQT 121