BLASTX nr result

ID: Dioscorea21_contig00001896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001896
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523871.1| conserved hypothetical protein [Ricinus comm...   168   2e-39
ref|XP_002313488.1| predicted protein [Populus trichocarpa] gi|2...   168   2e-39
emb|CAN79940.1| hypothetical protein VITISV_027779 [Vitis vinifera]   168   2e-39
ref|XP_002270691.1| PREDICTED: uncharacterized protein LOC100246...   168   3e-39
ref|NP_001141118.1| uncharacterized protein LOC100273203 [Zea ma...   168   3e-39

>ref|XP_002523871.1| conserved hypothetical protein [Ricinus communis]
           gi|223536959|gb|EEF38597.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 210

 Score =  168 bits (426), Expect = 2e-39
 Identities = 77/149 (51%), Positives = 110/149 (73%), Gaps = 8/149 (5%)
 Frame = +3

Query: 378 SNTNFLTSTLQVTLYSHNPNDRIGIYYDRLDTFITYKGQQITLATALPNGYQGHHDVSIW 557
           S TNFLTS +QVTL + NPN+RIGIYY++LD + +Y+ QQ+TL T LP  YQGH D++IW
Sbjct: 61  SGTNFLTSNIQVTLSTKNPNERIGIYYEKLDIYASYRNQQMTLGTQLPRSYQGHKDITIW 120

Query: 558 SPYLYGTDVPLAPFLMVALEQDENAGFLLLYVQVNGKLRWRVGSWMSGQYHITVSCPAFF 737
           SP+LYG  VP++P+L  AL +D +AG +L+ ++V+G L+W+VGSW+SG+Y I V+CPA+ 
Sbjct: 121 SPFLYGNSVPMSPYLASALNEDLDAGAVLVNIKVDGYLKWKVGSWISGRYRINVNCPAYM 180

Query: 738 TF--------DGLKSSFRFHQPTSCTVDV 800
           TF        DG+   ++F Q   C+V+V
Sbjct: 181 TFGNRNHGIADGVGIKYQFVQ--GCSVEV 207


>ref|XP_002313488.1| predicted protein [Populus trichocarpa] gi|222849896|gb|EEE87443.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  168 bits (426), Expect = 2e-39
 Identities = 76/147 (51%), Positives = 107/147 (72%), Gaps = 6/147 (4%)
 Frame = +3

Query: 378 SNTNFLTSTLQVTLYSHNPNDRIGIYYDRLDTFITYKGQQITLATALPNGYQGHHDVSIW 557
           S+ NFL+S +QVT+ + NPND+IGIYY++LD + +Y  QQITLAT LP  YQGH+DVS+W
Sbjct: 63  SDPNFLSSNMQVTISTKNPNDKIGIYYEKLDIYASYHNQQITLATELPPTYQGHNDVSVW 122

Query: 558 SPYLYGTDVPLAPFLMVALEQDENAGFLLLYVQVNGKLRWRVGSWMSGQYHITVSCPAFF 737
           SP+LYG  VP++P+L V++ QD NAG LL  +++NGKL+W+VGSW+SG+Y I V+CPA+ 
Sbjct: 123 SPFLYGDAVPVSPYLAVSINQDVNAGVLLFNIKINGKLKWKVGSWLSGRYRIFVNCPAYI 182

Query: 738 TFD------GLKSSFRFHQPTSCTVDV 800
           T         + +  ++     C VDV
Sbjct: 183 TLGSRSNGINVGTGIKYQIVQHCHVDV 209


>emb|CAN79940.1| hypothetical protein VITISV_027779 [Vitis vinifera]
          Length = 208

 Score =  168 bits (426), Expect = 2e-39
 Identities = 78/153 (50%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
 Frame = +3

Query: 360 IQLNFSSNTNFLTSTLQVTLYSHNPNDRIGIYYDRLDTFITYKGQQITLATALPNGYQGH 539
           + LN SS   FLT+ +QVT++S NPN RIG+YY+ LD F TY+ QQITL   LP  YQGH
Sbjct: 56  LALNTSSAPGFLTTNIQVTVFSRNPNGRIGVYYENLDIFATYRSQQITLPALLPTTYQGH 115

Query: 540 HDVSIWSPYLYGTDVPLAPFLMVALEQDENAGFLLLYVQVNGKLRWRVGSWMSGQYHITV 719
            DV +WSP+LYG  VPLAP+L   L QD   G +LL V+++G+++W+VG+W+SG YHI V
Sbjct: 116 KDVIVWSPFLYGNSVPLAPYLCDMLNQDLMTGMVLLNVKIDGRVKWKVGTWISGSYHIHV 175

Query: 720 SCPAFFTF------DGLKSSFRFHQPTSCTVDV 800
           +CPA+ +F       G   + ++    SCTVDV
Sbjct: 176 NCPAYISFCERKDCIGFGPTVKYQLVKSCTVDV 208


>ref|XP_002270691.1| PREDICTED: uncharacterized protein LOC100246840 [Vitis vinifera]
           gi|296084854|emb|CBI28263.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score =  168 bits (425), Expect = 3e-39
 Identities = 78/153 (50%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
 Frame = +3

Query: 360 IQLNFSSNTNFLTSTLQVTLYSHNPNDRIGIYYDRLDTFITYKGQQITLATALPNGYQGH 539
           + LN SS   FLT+ +QVT++S NPN RIG+YY+ LD F TY+ QQITL   LP  YQGH
Sbjct: 56  LALNTSSAPGFLTTNVQVTVFSRNPNGRIGVYYENLDIFATYRSQQITLPALLPTTYQGH 115

Query: 540 HDVSIWSPYLYGTDVPLAPFLMVALEQDENAGFLLLYVQVNGKLRWRVGSWMSGQYHITV 719
            DV +WSP+LYG  VPLAP+L   L QD   G +LL V+++G+++W+VG+W+SG YHI V
Sbjct: 116 KDVIVWSPFLYGNSVPLAPYLCDMLNQDLMTGMVLLNVKIDGRVKWKVGTWISGSYHIHV 175

Query: 720 SCPAFFTF------DGLKSSFRFHQPTSCTVDV 800
           +CPA+ +F       G   + ++    SCTVDV
Sbjct: 176 NCPAYISFCERKDCIGFGPTVKYQLVKSCTVDV 208


>ref|NP_001141118.1| uncharacterized protein LOC100273203 [Zea mays]
           gi|194702708|gb|ACF85438.1| unknown [Zea mays]
           gi|413916172|gb|AFW56104.1| VAMP protein SEC22 [Zea
           mays]
          Length = 213

 Score =  168 bits (425), Expect = 3e-39
 Identities = 83/155 (53%), Positives = 109/155 (70%), Gaps = 9/155 (5%)
 Frame = +3

Query: 363 QLNFSSNT----NFLTSTLQVTLYSHNPNDRIGIYYDRLDTFITYKGQQITLATALPNGY 530
           QL+ S++T    + L++TLQVTL S NPN+R+G+YYDRLD + +YK QQ+T+A ALP  Y
Sbjct: 59  QLDLSNSTTPSSSLLSTTLQVTLASRNPNERVGVYYDRLDVYASYKYQQVTVAAALPAVY 118

Query: 531 QGHHDVSIWSPYLYGTDVPLAPFLMVALEQDENAGFLLLYVQVNGKLRWRVGSWMSGQYH 710
           QGH DV +WSP L G  VP AP+L  AL QD  AG+L+L V+V+G++RW+VGSW+SG YH
Sbjct: 119 QGHGDVDVWSPVLSGPGVPFAPYLADALRQDCQAGYLVLQVKVDGRVRWKVGSWISGHYH 178

Query: 711 ITVSCPAFFTFDGLK-----SSFRFHQPTSCTVDV 800
           + V+CPAF    G       S FRF   T C V+V
Sbjct: 179 LFVTCPAFLVTAGGNGAPGASGFRFQTTTYCHVEV 213


Top