BLASTX nr result

ID: Dioscorea21_contig00001878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001878
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321635.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
gb|AEI71779.1| JOKA2 [Nicotiana tabacum]                              187   2e-45
gb|ACN33320.1| unknown [Zea mays] gi|413937566|gb|AFW72117.1| hy...   175   1e-41
ref|XP_003550713.1| PREDICTED: uncharacterized protein LOC100816...   172   5e-41
ref|NP_001047302.1| Os02g0593700 [Oryza sativa Japonica Group] g...   171   2e-40

>ref|XP_002321635.1| predicted protein [Populus trichocarpa] gi|222868631|gb|EEF05762.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  191 bits (486), Expect = 1e-46
 Identities = 101/209 (48%), Positives = 121/209 (57%), Gaps = 1/209 (0%)
 Frame = -1

Query: 626 FIGGANPQFHPGTTSTTPVGLNPCPNRINIPSHGFLPSWLNPKAHPYRRGHSYIDSAFRT 447
           F  G      P T   +PV LNP P   N              +H  +R +S  +     
Sbjct: 214 FENGTKTAMSPHTAVPSPVNLNPNPQISN--------------SHVIKRNNSLNNPMVGM 259

Query: 446 FHRGVQCDNCGMHPIMGPRFKSNVKEDYDLCSICFAQIGNGADYTKIDR-VPYRSPRLFK 270
           FHRGVQCD CG+HPI GPR+KS VKEDYDLCSICFA++GN ADY K+DR +PYR+   FK
Sbjct: 260 FHRGVQCDGCGVHPITGPRYKSKVKEDYDLCSICFAEMGNEADYIKMDRPMPYRNRWSFK 319

Query: 269 ESYNPXXXXXXXXXXXXXXXXXXXXSKLDSRFIQDVTVLDGTIMSPSTPFTKIWRLRNNG 90
              +P                     KLDSRF+ DV V DGT+M   TPFTKIWR+RNNG
Sbjct: 320 GFNDPKSWAIPQPLSKGSYGVKGAQPKLDSRFVLDVNVSDGTMMPTCTPFTKIWRMRNNG 379

Query: 89  TIPWFVGTQLVWIGGDRLGNQTSVELEIP 3
           ++ W  G +LVWIGGDR  N  SVE+EIP
Sbjct: 380 SVAWPQGVRLVWIGGDRFFNTDSVEIEIP 408


>gb|AEI71779.1| JOKA2 [Nicotiana tabacum]
          Length = 843

 Score =  187 bits (476), Expect = 2e-45
 Identities = 111/251 (44%), Positives = 140/251 (55%), Gaps = 4/251 (1%)
 Frame = -1

Query: 746  SAGGSQPAIPAARILEPTSSSDRLRTLEPSLQPANVASTGFIGGANPQFHPGTTSTTPVG 567
            S G  +  I  +R  + + SS ++ TL     PAN           PQ     +    V 
Sbjct: 335  SFGKLKKCIWDSRNADSSGSSIKMPTLRLVPVPANECPF-------PQVPKNASRLVQVP 387

Query: 566  LNPCPNRINIPSHGFLPSWLNPKAHPYRRGHSYIDSAFRTFHRGVQCDNCGMHPIMGPRF 387
             N CP    +P+    P    P   P +R H++ D     FHRGV+CD CG+HPI GPRF
Sbjct: 388  ANECPFS-GVPNDPVPP----PLEVPLKRSHNHSDGTGTIFHRGVRCDGCGVHPITGPRF 442

Query: 386  KSNVKEDYDLCSICFAQIGNGADYTKIDR-VPYRSPRLFK---ESYNPXXXXXXXXXXXX 219
             S V+E+YDLCSICFA++GN ADY ++DR + YR P  FK   + +              
Sbjct: 443  ISKVQENYDLCSICFAEMGNDADYIRMDRPLTYRHPLSFKGLHDLHAARFRIPTVPHVSR 502

Query: 218  XXXXXXXXSKLDSRFIQDVTVLDGTIMSPSTPFTKIWRLRNNGTIPWFVGTQLVWIGGDR 39
                     KLDSRFIQDV +LDGTIM+P T FTKIWR+RNNG + W  GTQLVWIGGDR
Sbjct: 503  GYGVKPGRPKLDSRFIQDVNILDGTIMAPLTRFTKIWRMRNNGNLVWPQGTQLVWIGGDR 562

Query: 38   LGNQTSVELEI 6
            L ++ SVELEI
Sbjct: 563  LSDKFSVELEI 573


>gb|ACN33320.1| unknown [Zea mays] gi|413937566|gb|AFW72117.1| hypothetical protein
           ZEAMMB73_748913 [Zea mays]
          Length = 842

 Score =  175 bits (443), Expect = 1e-41
 Identities = 95/194 (48%), Positives = 123/194 (63%), Gaps = 15/194 (7%)
 Frame = -1

Query: 539 IPSHGFLPSWLNPKAHPYR---RGHSYID-------SAFRTFHRGVQCDNCGMHPIMGPR 390
           +P  G++PS   P  +P R    GH Y D       SA  + HR +QCD CG  PI+GPR
Sbjct: 361 VPPPGYVPSPHFP--YPGRLLSSGHPYGDLAGNMENSAPHSLHRWIQCDGCGAQPIVGPR 418

Query: 389 FKSNVKEDYDLCSICFAQIGNGADYTKIDR--VPYR---SPRLFKESYNPXXXXXXXXXX 225
           +KSNVKEDYDLC  CF ++GN  +YTKID+  +P+R    P ++++ ++P          
Sbjct: 419 YKSNVKEDYDLCDSCFQRMGNEMEYTKIDKPILPHRFLRDPHVYRKVHHPRVLMKSRRE- 477

Query: 224 XXXXXXXXXXSKLDSRFIQDVTVLDGTIMSPSTPFTKIWRLRNNGTIPWFVGTQLVWIGG 45
                      KL+SRFI DVTVLDGT+M+PSTPFTKIWR+ NNG++ W  GTQLVW+GG
Sbjct: 478 -----------KLESRFILDVTVLDGTLMTPSTPFTKIWRMHNNGSVVWPRGTQLVWVGG 526

Query: 44  DRLGNQTSVELEIP 3
           D+   QTSV LEIP
Sbjct: 527 DQFALQTSVPLEIP 540


>ref|XP_003550713.1| PREDICTED: uncharacterized protein LOC100816395 [Glycine max]
          Length = 847

 Score =  172 bits (437), Expect = 5e-41
 Identities = 92/203 (45%), Positives = 119/203 (58%), Gaps = 7/203 (3%)
 Frame = -1

Query: 590 TTSTTPVGLNPCPNRINIPSHGFLPSWLNP-----KAHPYRRGHSYIDSAFRTFHRGVQC 426
           TTS T      CP        G   SW  P     K  P++R HS+ D+    FH+GV+C
Sbjct: 392 TTSLTSGAFIDCP--------GSYYSWPPPLPGNYKMPPFKRSHSHTDAMSGMFHKGVRC 443

Query: 425 DNCGMHPIMGPRFKSNVKEDYDLCSICFAQIGNGADYTKIDR-VPYRSPRLFKESYN-PX 252
           D CG++PI GPRFKS VKE+YDLC+ICF ++GNG DY ++D     R PR     ++   
Sbjct: 444 DGCGVYPITGPRFKSKVKENYDLCNICFNEMGNGTDYIRMDHPASARGPRCVYGPFSFML 503

Query: 251 XXXXXXXXXXXXXXXXXXXSKLDSRFIQDVTVLDGTIMSPSTPFTKIWRLRNNGTIPWFV 72
                               +LDSRFI DV V+DGT+M+PST FTKIWR+RNNG+I W  
Sbjct: 504 QPTLPPHILKKGAILKHARPRLDSRFILDVNVIDGTMMAPSTAFTKIWRIRNNGSIVWPK 563

Query: 71  GTQLVWIGGDRLGNQTSVELEIP 3
           GTQLVWIGGD+  +   V+L++P
Sbjct: 564 GTQLVWIGGDKFSDFHLVDLQVP 586


>ref|NP_001047302.1| Os02g0593700 [Oryza sativa Japonica Group]
           gi|46805023|dbj|BAD16888.1| putative
           ubiquitin-associated (UBA) protein [Oryza sativa
           Japonica Group] gi|50726486|dbj|BAD34095.1| putative
           ubiquitin-associated (UBA) protein [Oryza sativa
           Japonica Group] gi|113536833|dbj|BAF09216.1|
           Os02g0593700 [Oryza sativa Japonica Group]
           gi|125540111|gb|EAY86506.1| hypothetical protein
           OsI_07886 [Oryza sativa Indica Group]
           gi|125582716|gb|EAZ23647.1| hypothetical protein
           OsJ_07348 [Oryza sativa Japonica Group]
           gi|215704627|dbj|BAG94255.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 845

 Score =  171 bits (432), Expect = 2e-40
 Identities = 92/205 (44%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
 Frame = -1

Query: 614 ANPQFHPGTTSTTPVGLNPCPNRINIPSHGFLPSWLNPKAHPYRR-GHSYIDSAFRTFHR 438
           A   F P    + P    P P       H   P  L    H +   G++  +S  RTFHR
Sbjct: 367 AGHPFQPHAPLSRPPPPMPAPMSYGPSPHFPYPGRLLSSGHLHGDLGNNIENSPARTFHR 426

Query: 437 GVQCDNCGMHPIMGPRFKSNVKEDYDLCSICFAQIGNGADYTKIDRVPYRSPRLFKESYN 258
            +QCD CG+ PI+GPR+KS  KEDYDLC  CF ++GN  +YT+ID+ P    RL ++   
Sbjct: 427 WIQCDGCGVQPIVGPRYKSKTKEDYDLCDACFHRMGNEVEYTRIDK-PLLPQRLLRDP-- 483

Query: 257 PXXXXXXXXXXXXXXXXXXXXSKLDSRFIQDVTVLDGTIMSPSTPFTKIWRLRNNGTIPW 78
                                 KL+SRFI DVTVLDGT+M+PSTPFTKIWR+ NNG+I W
Sbjct: 484 -----TLCRKIHSRAAMKSKREKLESRFILDVTVLDGTLMAPSTPFTKIWRMHNNGSIMW 538

Query: 77  FVGTQLVWIGGDRLGNQTSVELEIP 3
            +GTQL+W+GGD+   QT V LEIP
Sbjct: 539 PLGTQLIWVGGDQFALQTYVPLEIP 563


Top