BLASTX nr result

ID: Dioscorea21_contig00001875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001875
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA62561.1| TPA: putative mitochondrial transcription termin...    57   2e-06
emb|CBI18428.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|NP_001169565.1| uncharacterized protein LOC100383444 [Zea ma...    57   2e-06
ref|XP_002267835.1| PREDICTED: uncharacterized protein LOC100244...    57   2e-06

>tpg|DAA62561.1| TPA: putative mitochondrial transcription termination factor family
           protein [Zea mays]
          Length = 264

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +2

Query: 125 LPIKFRSG-CAALPIRASAGGDHGPDPSALDGEVEIGEARAAVMELLLESGASAEDAFQI 301
           LP + R G  AALP   S+  +    P+      ++ EA AAV +LL E GASA+DA  I
Sbjct: 46  LPRRRRGGPIAALPNTTSSSTNASASPT-----YDVREAEAAVADLLREGGASADDAAAI 100

Query: 302 AVKAPKYVGMLVDSVREL 355
           A +AP Y  ML D VREL
Sbjct: 101 AARAPAYAAMLADGVREL 118


>emb|CBI18428.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +2

Query: 212 DGEVEIGEARAAVMELLLESGASAEDAFQIAVKAPKYVGMLVDSVREL 355
           D + E G+ARAAV E+L ESG S E++ +IA+ +PKYV MLVD VR+L
Sbjct: 69  DEDEEEGQARAAVSEILRESGVSEEESVEIALNSPKYVKMLVDGVRDL 116


>ref|NP_001169565.1| uncharacterized protein LOC100383444 [Zea mays]
           gi|224030121|gb|ACN34136.1| unknown [Zea mays]
           gi|414886548|tpg|DAA62562.1| TPA: putative mitochondrial
           transcription termination factor family protein [Zea
           mays]
          Length = 612

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +2

Query: 125 LPIKFRSG-CAALPIRASAGGDHGPDPSALDGEVEIGEARAAVMELLLESGASAEDAFQI 301
           LP + R G  AALP   S+  +    P+      ++ EA AAV +LL E GASA+DA  I
Sbjct: 46  LPRRRRGGPIAALPNTTSSSTNASASPT-----YDVREAEAAVADLLREGGASADDAAAI 100

Query: 302 AVKAPKYVGMLVDSVREL 355
           A +AP Y  ML D VREL
Sbjct: 101 AARAPAYAAMLADGVREL 118


>ref|XP_002267835.1| PREDICTED: uncharacterized protein LOC100244378 [Vitis vinifera]
          Length = 601

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +2

Query: 212 DGEVEIGEARAAVMELLLESGASAEDAFQIAVKAPKYVGMLVDSVREL 355
           D + E G+ARAAV E+L ESG S E++ +IA+ +PKYV MLVD VR+L
Sbjct: 69  DEDEEEGQARAAVSEILRESGVSEEESVEIALNSPKYVKMLVDGVRDL 116


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