BLASTX nr result

ID: Dioscorea21_contig00001871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001871
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173618.1| PREDICTED: probable polygalacturonase non-ca...    66   3e-09
ref|XP_004142981.1| PREDICTED: probable polygalacturonase non-ca...    66   3e-09
dbj|BAK05386.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   3e-08
ref|XP_002444270.1| hypothetical protein SORBIDRAFT_07g019310 [S...    63   3e-08
ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit be...    61   1e-07

>ref|XP_004173618.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like, partial [Cucumis sativus]
          Length = 612

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -3

Query: 211 VDFKTYGHDYKTGEDHFKNYGENANNPEISFKTYKGIPTDFKSYAKTGVVFKDYQNTTTP 32
           V+F +YG  +  G D F  YG+N N   + FKTY G+ T FK YAK G+ F  Y N ++ 
Sbjct: 319 VNFASYGKSFNEGTDKFSGYGQNGNGQSVGFKTY-GVNTTFKDYAKQGINFAKYSNVSSG 377

Query: 31  SAKVESSG 8
            AK+  SG
Sbjct: 378 GAKMSVSG 385


>ref|XP_004142981.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Cucumis sativus]
          Length = 623

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -3

Query: 211 VDFKTYGHDYKTGEDHFKNYGENANNPEISFKTYKGIPTDFKSYAKTGVVFKDYQNTTTP 32
           V+F +YG  +  G D F  YG+N N   + FKTY G+ T FK YAK G+ F  Y N ++ 
Sbjct: 330 VNFASYGKSFNEGTDKFSGYGQNGNGQSVGFKTY-GVNTTFKDYAKQGINFAKYSNVSSG 388

Query: 31  SAKVESSG 8
            AK+  SG
Sbjct: 389 GAKMSVSG 396


>dbj|BAK05386.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 625

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -3

Query: 208 DFKTYGHDYKTGEDHFKNYGENAN-NPEISFKTYKGIPTDFKSYAKTGVVFKDYQNTTTP 32
           +F++YG     G   FK YG+  N N EI FK Y G  T FK+YAKTGV FK+Y NT+  
Sbjct: 328 EFESYGGSANAGSVGFKGYGQGTNRNHEIGFKAYAGDNTTFKAYAKTGVDFKEYHNTSAA 387

Query: 31  SAKVESS 11
           +    +S
Sbjct: 388 ATTASTS 394


>ref|XP_002444270.1| hypothetical protein SORBIDRAFT_07g019310 [Sorghum bicolor]
           gi|241940620|gb|EES13765.1| hypothetical protein
           SORBIDRAFT_07g019310 [Sorghum bicolor]
          Length = 658

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = -3

Query: 208 DFKTYGHDYKTGEDHFKNYGENAN-NPEISFKTYKGIPTDFKSYAKTGVVFKDYQNTTTP 32
           +F++YG+    G   FK YGE +N N  I FK Y G    FK YAKTGV FK+Y NT++ 
Sbjct: 346 EFQSYGNSANPGSTTFKGYGEGSNPNHHIGFKEYAGENNTFKGYAKTGVSFKEYHNTSSS 405

Query: 31  SAKVESSGK 5
           +A +  S +
Sbjct: 406 TAALTVSAE 414


>ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative
           [Ricinus communis] gi|223535346|gb|EEF37021.1|
           Polygalacturonase-1 non-catalytic subunit beta
           precursor, putative [Ricinus communis]
          Length = 631

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = -3

Query: 211 VDFKTYGHDYKTGEDHFKNYGENANNPEISFKTYKGIPTDFKSYAKTGVVFKDYQN-TTT 35
           V+F  YG  +  G D FK YG+ AN  +I FK Y G+   FK YAK GV F  Y N T T
Sbjct: 334 VNFNNYGKSFNEGTDTFKGYGQGANAHKIGFKMY-GVNNTFKEYAKLGVSFAKYTNITAT 392

Query: 34  PSAK 23
           PSA+
Sbjct: 393 PSAE 396


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