BLASTX nr result

ID: Dioscorea21_contig00001866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001866
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containin...   318   1e-84
ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containin...   318   1e-84
ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14,...   308   1e-81
tpg|DAA63277.1| TPA: gamma response I protein [Zea mays]              306   4e-81
gb|ACN25849.1| unknown [Zea mays] gi|414887261|tpg|DAA63275.1| T...   306   4e-81

>ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like isoform 1 [Vitis vinifera]
          Length = 459

 Score =  318 bits (814), Expect = 1e-84
 Identities = 162/258 (62%), Positives = 188/258 (72%), Gaps = 6/258 (2%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXXT-PRASNSHRSPVQQPSNYQTPASALY 178
           DYKYYE RL EEE+ L+Q +D            + P++++  +  VQQ SNYQ P SALY
Sbjct: 204 DYKYYEYRLAEEEKTLSQTRDSQTSQSGGGTSTSAPKSTSGSQRSVQQRSNYQIPTSALY 263

Query: 179 ECNNDPVSSHAS-----AGKSSIYDGESSGRSPSDRIAMMEFYMNKAAQEERKRQPRQSK 343
           E   D  +S +S     AG++    GESS  + +D IAMMEFYM KAAQEER+RQP+QSK
Sbjct: 264 EATEDTRASGSSVQAALAGRAGY--GESSAPTGADPIAMMEFYMKKAAQEERRRQPKQSK 321

Query: 344 DEMPPPASLLGPMKKGHHMGDYIPQDELEKFMANCNDXXXXXXXXXXXXXXXXXXDNVGH 523
           DEMPPPASL  P KKGHHMGDYIPQ+ELEKF++ CND                  DNVGH
Sbjct: 322 DEMPPPASLQTPGKKGHHMGDYIPQEELEKFLSTCNDAAAQKAAREAAERAKIQADNVGH 381

Query: 524 KLLSKMGWKEGEGLGSDKHGRADPVMAGNVKLNNLGIGAQHPGEVTEEDDIYEQYKKRMM 703
           KLLSKMGWKEGEGLGS ++G ADP+MAGNVKL+NLG+GAQ PGEVT +DDIYEQYKKRMM
Sbjct: 382 KLLSKMGWKEGEGLGSSRNGIADPIMAGNVKLDNLGVGAQQPGEVTADDDIYEQYKKRMM 441

Query: 704 LGYRYRPNPLNNPRKAYY 757
           LGYRYRPNPLNNPRKAYY
Sbjct: 442 LGYRYRPNPLNNPRKAYY 459


>ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like isoform 2 [Vitis vinifera]
           gi|297736220|emb|CBI24858.3| unnamed protein product
           [Vitis vinifera]
          Length = 444

 Score =  318 bits (814), Expect = 1e-84
 Identities = 162/258 (62%), Positives = 188/258 (72%), Gaps = 6/258 (2%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXXT-PRASNSHRSPVQQPSNYQTPASALY 178
           DYKYYE RL EEE+ L+Q +D            + P++++  +  VQQ SNYQ P SALY
Sbjct: 189 DYKYYEYRLAEEEKTLSQTRDSQTSQSGGGTSTSAPKSTSGSQRSVQQRSNYQIPTSALY 248

Query: 179 ECNNDPVSSHAS-----AGKSSIYDGESSGRSPSDRIAMMEFYMNKAAQEERKRQPRQSK 343
           E   D  +S +S     AG++    GESS  + +D IAMMEFYM KAAQEER+RQP+QSK
Sbjct: 249 EATEDTRASGSSVQAALAGRAGY--GESSAPTGADPIAMMEFYMKKAAQEERRRQPKQSK 306

Query: 344 DEMPPPASLLGPMKKGHHMGDYIPQDELEKFMANCNDXXXXXXXXXXXXXXXXXXDNVGH 523
           DEMPPPASL  P KKGHHMGDYIPQ+ELEKF++ CND                  DNVGH
Sbjct: 307 DEMPPPASLQTPGKKGHHMGDYIPQEELEKFLSTCNDAAAQKAAREAAERAKIQADNVGH 366

Query: 524 KLLSKMGWKEGEGLGSDKHGRADPVMAGNVKLNNLGIGAQHPGEVTEEDDIYEQYKKRMM 703
           KLLSKMGWKEGEGLGS ++G ADP+MAGNVKL+NLG+GAQ PGEVT +DDIYEQYKKRMM
Sbjct: 367 KLLSKMGWKEGEGLGSSRNGIADPIMAGNVKLDNLGVGAQQPGEVTADDDIYEQYKKRMM 426

Query: 704 LGYRYRPNPLNNPRKAYY 757
           LGYRYRPNPLNNPRKAYY
Sbjct: 427 LGYRYRPNPLNNPRKAYY 444


>ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14, putative [Ricinus
           communis] gi|223547687|gb|EEF49180.1| arginine/serine
           rich splicing factor sf4/14, putative [Ricinus communis]
          Length = 441

 Score =  308 bits (788), Expect = 1e-81
 Identities = 162/256 (63%), Positives = 180/256 (70%), Gaps = 4/256 (1%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXXTPR-ASNSHRSPVQQPSNYQTPASALY 178
           DYKYYE RL EEER L+Q  D              + +S S RS  QQP NYQ PASALY
Sbjct: 189 DYKYYEFRLAEEERALSQTGDSENSPSGATSPSASKFSSGSQRSHQQQP-NYQIPASALY 247

Query: 179 ECNNDPVSSHASAGKSSIYDGESSGRSPSDRIAMMEFYMNKAAQEERKRQPRQSKDEMPP 358
           +  ++P  S  SA  +S+  G +   S +D IAMMEFYM KAAQEER+RQP+QSKDEMPP
Sbjct: 248 DATDEPGGSLTSAQIASV--GRAGDSSGTDPIAMMEFYMKKAAQEERRRQPKQSKDEMPP 305

Query: 359 PASLLGP---MKKGHHMGDYIPQDELEKFMANCNDXXXXXXXXXXXXXXXXXXDNVGHKL 529
           P SL GP    K+GHHMGDYIPQ+ELEKF+A CND                  DNVGHKL
Sbjct: 306 PPSLQGPGASSKRGHHMGDYIPQEELEKFLATCNDAAAQRAAKESAERSKIQADNVGHKL 365

Query: 530 LSKMGWKEGEGLGSDKHGRADPVMAGNVKLNNLGIGAQHPGEVTEEDDIYEQYKKRMMLG 709
           LSKMGWKEGEGLGS + G ADP+ AGNVK NNLG+GA  PGEVT EDDIYEQYKKRMMLG
Sbjct: 366 LSKMGWKEGEGLGSARSGIADPIKAGNVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLG 425

Query: 710 YRYRPNPLNNPRKAYY 757
           YRYRPNPLNNPRKAYY
Sbjct: 426 YRYRPNPLNNPRKAYY 441


>tpg|DAA63277.1| TPA: gamma response I protein [Zea mays]
          Length = 410

 Score =  306 bits (783), Expect = 4e-81
 Identities = 155/252 (61%), Positives = 177/252 (70%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXXTPRASNSHRSPVQQPSNYQTPASALYE 181
           DYKYYE +L EEER LAQ+K+                  ++RS  +Q SNYQTPASALY 
Sbjct: 165 DYKYYEFQLAEEERALAQSKEAEASKANSGTASFKAPGGTYRSSFEQKSNYQTPASALYG 224

Query: 182 CNNDPVSSHASAGKSSIYDGESSGRSPSDRIAMMEFYMNKAAQEERKRQPRQSKDEMPPP 361
                    +S G SS Y   ++   PSD +A+MEFY  KAA EERKR PRQSKDEMPPP
Sbjct: 225 A----YEGSSSQGSSSSYGDHTA--PPSDPVALMEFYAKKAALEERKRPPRQSKDEMPPP 278

Query: 362 ASLLGPMKKGHHMGDYIPQDELEKFMANCNDXXXXXXXXXXXXXXXXXXDNVGHKLLSKM 541
            SL GP KKGHHMGD+IPQ+ELEKFMA CND                  DN+GHKLLSKM
Sbjct: 279 PSLQGPPKKGHHMGDFIPQEELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKM 338

Query: 542 GWKEGEGLGSDKHGRADPVMAGNVKLNNLGIGAQHPGEVTEEDDIYEQYKKRMMLGYRYR 721
           GW+EGEGLGS++ GRADPVMAG+VK ++LG+GA  PGEVT EDDIYEQYKKRMMLGYRYR
Sbjct: 339 GWREGEGLGSERRGRADPVMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYR 398

Query: 722 PNPLNNPRKAYY 757
           PNPLNNPRK+YY
Sbjct: 399 PNPLNNPRKSYY 410


>gb|ACN25849.1| unknown [Zea mays] gi|414887261|tpg|DAA63275.1| TPA: gamma response
           I protein isoform 1 [Zea mays]
           gi|414887262|tpg|DAA63276.1| TPA: gamma response I
           protein isoform 2 [Zea mays]
          Length = 419

 Score =  306 bits (783), Expect = 4e-81
 Identities = 155/252 (61%), Positives = 177/252 (70%)
 Frame = +2

Query: 2   DYKYYEQRLLEEERILAQAKDXXXXXXXXXXXXTPRASNSHRSPVQQPSNYQTPASALYE 181
           DYKYYE +L EEER LAQ+K+                  ++RS  +Q SNYQTPASALY 
Sbjct: 174 DYKYYEFQLAEEERALAQSKEAEASKANSGTASFKAPGGTYRSSFEQKSNYQTPASALYG 233

Query: 182 CNNDPVSSHASAGKSSIYDGESSGRSPSDRIAMMEFYMNKAAQEERKRQPRQSKDEMPPP 361
                    +S G SS Y   ++   PSD +A+MEFY  KAA EERKR PRQSKDEMPPP
Sbjct: 234 A----YEGSSSQGSSSSYGDHTA--PPSDPVALMEFYAKKAALEERKRPPRQSKDEMPPP 287

Query: 362 ASLLGPMKKGHHMGDYIPQDELEKFMANCNDXXXXXXXXXXXXXXXXXXDNVGHKLLSKM 541
            SL GP KKGHHMGD+IPQ+ELEKFMA CND                  DN+GHKLLSKM
Sbjct: 288 PSLQGPPKKGHHMGDFIPQEELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKM 347

Query: 542 GWKEGEGLGSDKHGRADPVMAGNVKLNNLGIGAQHPGEVTEEDDIYEQYKKRMMLGYRYR 721
           GW+EGEGLGS++ GRADPVMAG+VK ++LG+GA  PGEVT EDDIYEQYKKRMMLGYRYR
Sbjct: 348 GWREGEGLGSERRGRADPVMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYR 407

Query: 722 PNPLNNPRKAYY 757
           PNPLNNPRK+YY
Sbjct: 408 PNPLNNPRKSYY 419


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