BLASTX nr result

ID: Dioscorea21_contig00001865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001865
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY99384.1| hypothetical protein OsI_21352 [Oryza sativa Indi...   104   7e-21
ref|NP_001056594.2| Os06g0112400 [Oryza sativa Japonica Group] g...   103   1e-20
ref|XP_003557247.1| PREDICTED: protein vip1-like [Brachypodium d...   102   4e-20
gb|ACN26306.1| unknown [Zea mays] gi|413942592|gb|AFW75241.1| pu...   101   7e-20
gb|ACR37674.1| unknown [Zea mays]                                     100   1e-19

>gb|EAY99384.1| hypothetical protein OsI_21352 [Oryza sativa Indica Group]
           gi|125595806|gb|EAZ35586.1| hypothetical protein
           OsJ_19872 [Oryza sativa Japonica Group]
          Length = 272

 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/71 (73%), Positives = 62/71 (87%)
 Frame = +2

Query: 8   SLASLNFSQMSARTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKD 187
           +LA L     + RTVKVTNVSLSA+ +D++EFFSFSGDIE+VEMQS DEWSQ+A+VTFKD
Sbjct: 6   ALAVLRKFFSAVRTVKVTNVSLSATVQDIKEFFSFSGDIEHVEMQSGDEWSQVAYVTFKD 65

Query: 188 PQGADTALLLS 220
           PQGA+TALLLS
Sbjct: 66  PQGAETALLLS 76


>ref|NP_001056594.2| Os06g0112400 [Oryza sativa Japonica Group]
           gi|55295911|dbj|BAD67779.1| putative RNA recognition
           motif (RRM)-containing protein [Oryza sativa Japonica
           Group] gi|215692537|dbj|BAG87957.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215704336|dbj|BAG93770.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215708750|dbj|BAG94019.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737453|dbj|BAG96583.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255676652|dbj|BAF18508.2| Os06g0112400 [Oryza sativa
           Japonica Group]
          Length = 261

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = +2

Query: 44  RTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKDPQGADTALLLS 220
           RTVKVTNVSLSA+ +D++EFFSFSGDIE+VEMQS DEWSQ+A+VTFKDPQGA+TALLLS
Sbjct: 7   RTVKVTNVSLSATVQDIKEFFSFSGDIEHVEMQSGDEWSQVAYVTFKDPQGAETALLLS 65


>ref|XP_003557247.1| PREDICTED: protein vip1-like [Brachypodium distachyon]
          Length = 268

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/59 (81%), Positives = 57/59 (96%)
 Frame = +2

Query: 44  RTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKDPQGADTALLLS 220
           +TVKVTNVSLSA+E+D++EFFSFSGDIE+VEMQS DEWSQ+A+VTFKD QGA+TALLLS
Sbjct: 17  KTVKVTNVSLSATEQDIKEFFSFSGDIEHVEMQSGDEWSQVAYVTFKDAQGAETALLLS 75


>gb|ACN26306.1| unknown [Zea mays] gi|413942592|gb|AFW75241.1| putative RNA
           recognition motif containing family protein [Zea mays]
          Length = 268

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = +2

Query: 35  MSARTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKDPQGADTALL 214
           +  RTVKVTNVSLSA+ +D++EFFSFSGDIE+VEMQS DEWSQIA+VTFKD QGA+TALL
Sbjct: 10  LQPRTVKVTNVSLSATVQDIKEFFSFSGDIEHVEMQSGDEWSQIAYVTFKDAQGAETALL 69

Query: 215 LS 220
           LS
Sbjct: 70  LS 71


>gb|ACR37674.1| unknown [Zea mays]
          Length = 261

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = +2

Query: 44  RTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKDPQGADTALLLS 220
           RTVKVTNVSLSA+ +D++EFFSFSGDIE+VEMQS DEWSQIA+VTFKD QGA+TALLLS
Sbjct: 6   RTVKVTNVSLSATVQDIKEFFSFSGDIEHVEMQSGDEWSQIAYVTFKDAQGAETALLLS 64


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