BLASTX nr result
ID: Dioscorea21_contig00001865
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00001865 (221 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAY99384.1| hypothetical protein OsI_21352 [Oryza sativa Indi... 104 7e-21 ref|NP_001056594.2| Os06g0112400 [Oryza sativa Japonica Group] g... 103 1e-20 ref|XP_003557247.1| PREDICTED: protein vip1-like [Brachypodium d... 102 4e-20 gb|ACN26306.1| unknown [Zea mays] gi|413942592|gb|AFW75241.1| pu... 101 7e-20 gb|ACR37674.1| unknown [Zea mays] 100 1e-19 >gb|EAY99384.1| hypothetical protein OsI_21352 [Oryza sativa Indica Group] gi|125595806|gb|EAZ35586.1| hypothetical protein OsJ_19872 [Oryza sativa Japonica Group] Length = 272 Score = 104 bits (260), Expect = 7e-21 Identities = 52/71 (73%), Positives = 62/71 (87%) Frame = +2 Query: 8 SLASLNFSQMSARTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKD 187 +LA L + RTVKVTNVSLSA+ +D++EFFSFSGDIE+VEMQS DEWSQ+A+VTFKD Sbjct: 6 ALAVLRKFFSAVRTVKVTNVSLSATVQDIKEFFSFSGDIEHVEMQSGDEWSQVAYVTFKD 65 Query: 188 PQGADTALLLS 220 PQGA+TALLLS Sbjct: 66 PQGAETALLLS 76 >ref|NP_001056594.2| Os06g0112400 [Oryza sativa Japonica Group] gi|55295911|dbj|BAD67779.1| putative RNA recognition motif (RRM)-containing protein [Oryza sativa Japonica Group] gi|215692537|dbj|BAG87957.1| unnamed protein product [Oryza sativa Japonica Group] gi|215704336|dbj|BAG93770.1| unnamed protein product [Oryza sativa Japonica Group] gi|215708750|dbj|BAG94019.1| unnamed protein product [Oryza sativa Japonica Group] gi|215737453|dbj|BAG96583.1| unnamed protein product [Oryza sativa Japonica Group] gi|255676652|dbj|BAF18508.2| Os06g0112400 [Oryza sativa Japonica Group] Length = 261 Score = 103 bits (257), Expect = 1e-20 Identities = 49/59 (83%), Positives = 57/59 (96%) Frame = +2 Query: 44 RTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKDPQGADTALLLS 220 RTVKVTNVSLSA+ +D++EFFSFSGDIE+VEMQS DEWSQ+A+VTFKDPQGA+TALLLS Sbjct: 7 RTVKVTNVSLSATVQDIKEFFSFSGDIEHVEMQSGDEWSQVAYVTFKDPQGAETALLLS 65 >ref|XP_003557247.1| PREDICTED: protein vip1-like [Brachypodium distachyon] Length = 268 Score = 102 bits (253), Expect = 4e-20 Identities = 48/59 (81%), Positives = 57/59 (96%) Frame = +2 Query: 44 RTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKDPQGADTALLLS 220 +TVKVTNVSLSA+E+D++EFFSFSGDIE+VEMQS DEWSQ+A+VTFKD QGA+TALLLS Sbjct: 17 KTVKVTNVSLSATEQDIKEFFSFSGDIEHVEMQSGDEWSQVAYVTFKDAQGAETALLLS 75 >gb|ACN26306.1| unknown [Zea mays] gi|413942592|gb|AFW75241.1| putative RNA recognition motif containing family protein [Zea mays] Length = 268 Score = 101 bits (251), Expect = 7e-20 Identities = 49/62 (79%), Positives = 57/62 (91%) Frame = +2 Query: 35 MSARTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKDPQGADTALL 214 + RTVKVTNVSLSA+ +D++EFFSFSGDIE+VEMQS DEWSQIA+VTFKD QGA+TALL Sbjct: 10 LQPRTVKVTNVSLSATVQDIKEFFSFSGDIEHVEMQSGDEWSQIAYVTFKDAQGAETALL 69 Query: 215 LS 220 LS Sbjct: 70 LS 71 >gb|ACR37674.1| unknown [Zea mays] Length = 261 Score = 100 bits (250), Expect = 1e-19 Identities = 49/59 (83%), Positives = 56/59 (94%) Frame = +2 Query: 44 RTVKVTNVSLSASEKDVREFFSFSGDIEYVEMQSADEWSQIAHVTFKDPQGADTALLLS 220 RTVKVTNVSLSA+ +D++EFFSFSGDIE+VEMQS DEWSQIA+VTFKD QGA+TALLLS Sbjct: 6 RTVKVTNVSLSATVQDIKEFFSFSGDIEHVEMQSGDEWSQIAYVTFKDAQGAETALLLS 64