BLASTX nr result

ID: Dioscorea21_contig00001842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001842
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285378.1| PREDICTED: biotin carboxyl carrier protein o...   244   2e-62
ref|XP_003543673.1| PREDICTED: biotin carboxyl carrier protein o...   239   1e-60
emb|CAN68457.1| hypothetical protein VITISV_031448 [Vitis vinifera]   238   2e-60
ref|XP_003546124.1| PREDICTED: biotin carboxyl carrier protein o...   238   3e-60
ref|XP_002299605.1| predicted protein [Populus trichocarpa] gi|2...   237   5e-60

>ref|XP_002285378.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase [Vitis vinifera]
           gi|297743403|emb|CBI36270.3| unnamed protein product
           [Vitis vinifera]
          Length = 274

 Score =  244 bits (624), Expect = 2e-62
 Identities = 159/300 (53%), Positives = 186/300 (62%), Gaps = 15/300 (5%)
 Frame = +1

Query: 49  MASCSLGASTNTTLPNLLSGFKKIKCSRLDITFKVNSIGVQTSLGLRGIQLSPDRVHGTK 228
           MASC LGA +             IK S LD+        V+T LG+   + S      T 
Sbjct: 1   MASCGLGAPS-------------IKISNLDL--------VRTRLGVLQSRFSIR----TS 35

Query: 229 FSWKSL---------RSANPIVVNCGISSAKN---DIEVGALEEEKST--RDQLIPFSPE 366
            +W  L         RS   I++  G SS      ++E G+ EE KS+    QL P + E
Sbjct: 36  TAWTPLNNSGLVISQRSQKAIILCRGSSSEAESAVNLEDGS-EETKSSGLTSQLTPNAYE 94

Query: 367 VESLLNVICDTTSIAEFGLNLSGFRLYVKRDINDEMLNLXXXXXXXXXXXXNELLDQ-NG 543
           VESLL+ ICDTTSIAEF L L GFRLY+ RD+  ++               N+   + NG
Sbjct: 95  VESLLSEICDTTSIAEFELKLGGFRLYMMRDLAGKIEPTPPPSSTPVTVSLNDEAPKLNG 154

Query: 544 FVSTTSLTLSKPKPSSGSFQQILDSSHDEGLMILQSPKVGFFRRSRTIKGKKAPPSCKEK 723
             S +SL +SK     G  Q +LD + DEGLMILQSPKVGFFRRSRTIKGK+APPSCKEK
Sbjct: 155 SASMSSLPISKSALLLGQSQTLLDRAADEGLMILQSPKVGFFRRSRTIKGKRAPPSCKEK 214

Query: 724 QQVKEGQVICYVEQLGGEIPIESDVSGEVIKIFRRDGEPVGYGDALIAILPSFPGIKKLQ 903
           Q VKEGQV+CY+EQLGGEIPIESDVSGEVIKI R DGEPVGYGDALIAILPSFPGIKKLQ
Sbjct: 215 QIVKEGQVLCYIEQLGGEIPIESDVSGEVIKILREDGEPVGYGDALIAILPSFPGIKKLQ 274


>ref|XP_003543673.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 1, chloroplastic-like [Glycine max]
          Length = 298

 Score =  239 bits (610), Expect = 1e-60
 Identities = 148/293 (50%), Positives = 182/293 (62%), Gaps = 7/293 (2%)
 Frame = +1

Query: 46  SMASCSLGASTNTTLPNLLSGFKKIKCSRLDITFKVNSIGVQTSLGLRGIQ---LSPDRV 216
           SMASCS+G + N  + NL  G KK+  SR   T    S    TSL +       L+    
Sbjct: 25  SMASCSIG-TPNIKVLNLHFGGKKVGLSRQFGTRSWISRLQYTSLVMSRQTVRFLASSNG 83

Query: 217 HGTKFSWKSLRSANPIVVNCGISSAKNDIEVGALEEEKSTRDQLIPFSPEVESLLNVICD 396
             T+  + +    +  + + G++S                  +LIP   EVE LL  +CD
Sbjct: 84  PSTEIQFAARSEGSEEIRSSGLTS------------------ELIPNINEVEFLLTKLCD 125

Query: 397 TTSIAEFGLNLSGFRLYVKRDINDEMLNLXXXXXXXXXXXX-NELLDQNGFVSTTSLTLS 573
           T+SI E  L L+GF L+V RD+ ++   L              E    NG V TTSL +S
Sbjct: 126 TSSIGELDLKLAGFHLHVVRDLTEKTKTLPPLIPASVSIINVTETPKTNGSVPTTSLAVS 185

Query: 574 KPK---PSSGSFQQILDSSHDEGLMILQSPKVGFFRRSRTIKGKKAPPSCKEKQQVKEGQ 744
           KP    PSSGS Q+ LD + DEGL+I+QSPKVGFFRRSRTIKGK+APPSCKEKQ V+EGQ
Sbjct: 186 KPVDPVPSSGSIQRFLDKAADEGLVIIQSPKVGFFRRSRTIKGKRAPPSCKEKQNVEEGQ 245

Query: 745 VICYVEQLGGEIPIESDVSGEVIKIFRRDGEPVGYGDALIAILPSFPGIKKLQ 903
           VICY+EQLGGE+PIESDVSGEVIKI R+DG+PVGYGDAL+AILPSFPGIKKLQ
Sbjct: 246 VICYIEQLGGELPIESDVSGEVIKILRQDGDPVGYGDALVAILPSFPGIKKLQ 298


>emb|CAN68457.1| hypothetical protein VITISV_031448 [Vitis vinifera]
          Length = 252

 Score =  238 bits (608), Expect = 2e-60
 Identities = 136/211 (64%), Positives = 155/211 (73%), Gaps = 3/211 (1%)
 Frame = +1

Query: 280 ISSAKNDIEVGALEEEKST--RDQLIPFSPEVESLLNVICDTTSIAEFGLNLSGFRLYVK 453
           + SA N +E G+ EE KS+    QL P + EVESLL+ ICDTTSIAEF L L GFRLY+ 
Sbjct: 44  VGSAVN-LEDGS-EETKSSGLTSQLTPNAYEVESLLSEICDTTSIAEFELKLGGFRLYMM 101

Query: 454 RDINDEMLNLXXXXXXXXXXXXNELLDQ-NGFVSTTSLTLSKPKPSSGSFQQILDSSHDE 630
           RD+  ++               N+   + NG  S +SL +SK     G  Q +LD + DE
Sbjct: 102 RDLAGKIEPTPPPSSTPVTVSLNDEAPKLNGSASMSSLPISKSALLLGQSQTLLDRAADE 161

Query: 631 GLMILQSPKVGFFRRSRTIKGKKAPPSCKEKQQVKEGQVICYVEQLGGEIPIESDVSGEV 810
           GLMILQSPKVGFFRRSRTIKGK+APPSCKEKQ VKEGQV+CY+EQLGGEIPIESDVSGEV
Sbjct: 162 GLMILQSPKVGFFRRSRTIKGKRAPPSCKEKQIVKEGQVLCYIEQLGGEIPIESDVSGEV 221

Query: 811 IKIFRRDGEPVGYGDALIAILPSFPGIKKLQ 903
           IKI R DGEPVGYGDALIAILPSFPGIKKLQ
Sbjct: 222 IKILREDGEPVGYGDALIAILPSFPGIKKLQ 252


>ref|XP_003546124.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 1, chloroplastic-like [Glycine max]
          Length = 269

 Score =  238 bits (606), Expect = 3e-60
 Identities = 145/291 (49%), Positives = 183/291 (62%), Gaps = 6/291 (2%)
 Frame = +1

Query: 49  MASCSLGASTNTTLPNLLSGFKKIKCSRLDITFKVNSIGVQTSLGLRGIQLSPDRVH--G 222
           MASCS+G + N    NL  G KK+  S+    F   S   + SL    + +S  +V    
Sbjct: 1   MASCSIG-TPNIKALNLHFGGKKVGLSQ---QFGTRSWISKQSLQYTSLVMSRQKVRFSP 56

Query: 223 TKFSWKSLRSANPIVVNCGISSAKNDIEVGALEEEKSTRDQLIPFSPEVESLLNVICDTT 402
           T+  + +    +  V + G++S                  +LIP   EVE LL  +CDT+
Sbjct: 57  TEIQFVTRSEGSEEVKSSGLTS------------------ELIPNLIEVEFLLTKLCDTS 98

Query: 403 SIAEFGLNLSGFRLYVKRDINDEMLNLXXXXXXXXXXXX-NELLDQNGFVSTTSLTLSKP 579
           SI E  L L+GF L+V RD+ ++   L              E    NG VSTTSL +SKP
Sbjct: 99  SIGELDLKLAGFHLHVVRDLTEKTKTLPPPIPASESIINVTETPKTNGSVSTTSLAVSKP 158

Query: 580 K---PSSGSFQQILDSSHDEGLMILQSPKVGFFRRSRTIKGKKAPPSCKEKQQVKEGQVI 750
               PSSGS Q+ L+ + DEGL+I+QSPKVGFFRRSRTIKG++APPSCKEKQ V+EGQVI
Sbjct: 159 VDPIPSSGSIQRFLNKAADEGLVIIQSPKVGFFRRSRTIKGRRAPPSCKEKQNVEEGQVI 218

Query: 751 CYVEQLGGEIPIESDVSGEVIKIFRRDGEPVGYGDALIAILPSFPGIKKLQ 903
           CY+EQLGGE+PIESDVSGEVIKI ++DG+PVGYGDAL+AILPSFPGIKKLQ
Sbjct: 219 CYIEQLGGELPIESDVSGEVIKILQKDGDPVGYGDALVAILPSFPGIKKLQ 269


>ref|XP_002299605.1| predicted protein [Populus trichocarpa] gi|222846863|gb|EEE84410.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  237 bits (604), Expect = 5e-60
 Identities = 127/203 (62%), Positives = 150/203 (73%), Gaps = 8/203 (3%)
 Frame = +1

Query: 319 EEEKST--RDQLIPFSPEVESLLNVICDTTSIAEFGLNLSGFRLYVKRDIND------EM 474
           +E KS+    QLIP S E+ESL+  IC+TTS+AE  L L GFRLYV+RD+ +      + 
Sbjct: 5   KETKSSGLTSQLIPNSSEIESLVTEICNTTSVAELELKLGGFRLYVRRDLTEKNKDTHQP 64

Query: 475 LNLXXXXXXXXXXXXNELLDQNGFVSTTSLTLSKPKPSSGSFQQILDSSHDEGLMILQSP 654
           L               +  D NG VST SL +SK +PSSG     LD + DEGLMILQSP
Sbjct: 65  LPAPPASLAVTVKTTTDASDLNGSVST-SLAISKQEPSSGGIISFLDRAADEGLMILQSP 123

Query: 655 KVGFFRRSRTIKGKKAPPSCKEKQQVKEGQVICYVEQLGGEIPIESDVSGEVIKIFRRDG 834
           +VGFFRRSRTIKGK+APPSCKEKQ VKEGQV+C++EQLGGE+PIE+D+SGEVI+I R DG
Sbjct: 124 RVGFFRRSRTIKGKRAPPSCKEKQIVKEGQVLCFIEQLGGELPIETDISGEVIRILREDG 183

Query: 835 EPVGYGDALIAILPSFPGIKKLQ 903
           EPVGYGDALIAILPSFPGIKKLQ
Sbjct: 184 EPVGYGDALIAILPSFPGIKKLQ 206


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