BLASTX nr result

ID: Dioscorea21_contig00001832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001832
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vi...   126   4e-27
gb|AEV43357.1| auxin-response factor [Citrus sinensis]                121   2e-25
gb|AAP06759.1| auxin response factor-like protein [Mangifera ind...   116   5e-24
ref|XP_002511100.1| Auxin response factor, putative [Ricinus com...   115   1e-23
ref|XP_002322300.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21

>ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
            gi|297734502|emb|CBI15749.3| unnamed protein product
            [Vitis vinifera]
          Length = 862

 Score =  126 bits (317), Expect = 4e-27
 Identities = 93/262 (35%), Positives = 126/262 (48%), Gaps = 10/262 (3%)
 Frame = -3

Query: 757  RHEPVLTDILSFETPRGSLKGGL--FLNQTTSEINSSRNCFKDQEGEFNFLPGSWSLMPS 584
            RHEP  TD+LS    R     G   F++Q     N+ +    + E +FN L G WS+MPS
Sbjct: 502  RHEPTCTDLLSGFGARTDSSHGFSSFVDQNDVAANTMKKHL-EHESKFNLLAGPWSMMPS 560

Query: 583  NSYLPMNDSSLRIAAQTSESPYHKPGNATYSGFGCNPASQALGVEKXXXXXXXXXXXPNS 404
               L + +SS+++  Q S+ PY   G+A + GF   P      VE              S
Sbjct: 561  GLSLNLLESSIKVPVQGSDMPYQTRGDARFGGFSEYPTLHGHRVE-LQQGNWLMPPPAQS 619

Query: 403  ETEAASHPRFVRPQSLTPIHQESATTKASGNCMLFGFHLNSTPAVPGQALSHMNAIQESE 224
              E  +H R + P+ +    QE+   K  GNC LFG  L   P +   A+S+ +   E  
Sbjct: 620  HFENFAHSRELMPKPILVQKQEAVKPK-DGNCKLFGIPLIGNPVISEPAMSYRSMTNEPA 678

Query: 223  PDVHPDVTLGQLHPP--EAEACSLQSKGTKSVDSSHTGSEQD------LNPAKDVHSKHY 68
              +H       L P   +++  S QSKG KS D+    SEQ+      L  ++DV  K  
Sbjct: 679  GHLH-------LAPSAFDSDQKSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQ 731

Query: 67   GGSVRSCTKVHKQGIALGRSVD 2
              S RSCTKVHKQGIALGRSVD
Sbjct: 732  SVSTRSCTKVHKQGIALGRSVD 753


>gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score =  121 bits (303), Expect = 2e-25
 Identities = 91/261 (34%), Positives = 120/261 (45%), Gaps = 6/261 (2%)
 Frame = -3

Query: 766  PMPRHEPVLTDILSFETPRGSLKGGLFLNQTTSEINSSRNCFKDQEGEFNFLPGSWSLMP 587
            P  RHEPV TD+LS          G   +   ++    R    DQEG+FN +   WSLMP
Sbjct: 489  PPGRHEPVYTDLLSGFGANADPSHGF--SSPFADAVPVRKSVLDQEGKFNLVARPWSLMP 546

Query: 586  SNSYLPMNDSSLRIAAQTSESPYHKPGNATYSGFGCNPASQALGVEKXXXXXXXXXXXPN 407
            S   L M +S+ ++  Q  +  Y   GN  Y GFG  P      VE            P 
Sbjct: 547  SGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPP- 605

Query: 406  SETEAASHPRFVRPQSLTPIHQESATTKASGNCMLFGFHLNSTPAVPGQALSHMNAIQES 227
            S  E ++H R + P+S     QE+  +K   +C LFG  L S   +P   +SH N + E 
Sbjct: 606  SNFENSAHSRELMPKSAMVQDQEAGKSK---DCKLFGIPLFSNHVMPEPVVSHRNTMNEP 662

Query: 226  EPDVHPDVTLGQLHPPEAEACSLQSKGTKSVDSSHTGSEQD------LNPAKDVHSKHYG 65
              ++       Q    E++  S  SK +K  D +   +E +          KDV SK   
Sbjct: 663  AGNLDQ-----QFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQC 717

Query: 64   GSVRSCTKVHKQGIALGRSVD 2
            GS RSCTKV KQGIALGRSVD
Sbjct: 718  GSTRSCTKVQKQGIALGRSVD 738


>gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
          Length = 840

 Score =  116 bits (291), Expect = 5e-24
 Identities = 96/264 (36%), Positives = 128/264 (48%), Gaps = 9/264 (3%)
 Frame = -3

Query: 766  PMPRHEPVLTDILS-FETPRGSLKG-GLFLNQTTSEINSSRNCFKDQEGEFNFLPGSWSL 593
            P  R EP+ TD+LS   T   S+ G    ++Q+ +     R     QEG+FN L   WSL
Sbjct: 477  PAGRSEPMCTDLLSGLGTNSDSVHGYSPSIDQSLASAVPVRKSLLSQEGKFNMLGSPWSL 536

Query: 592  MPSNSYLPMNDSSLRIAAQTSESPYHKPGNATYSGFGCNPASQALGVEKXXXXXXXXXXX 413
            MPS+  L M +++ ++  Q  +  Y   GNA Y G    P  Q+  V             
Sbjct: 537  MPSSLSLKMPETNAKVQVQGGDINYLVQGNARYGGLSDYPTLQSHRVGPSNGNWFMPPLV 596

Query: 412  PNSETEAASHPRFVRPQSLTPIHQESATTKASGNCMLFGFHLNSTPAV-PGQALSHMNAI 236
             +S  E     R +  + ++  H E+  TK   +C LFG  L S+  V P   L H N++
Sbjct: 597  -SSHFENLVPSRELMEKPISVQHHEAGKTK---DCKLFGIPLVSSSCVTPEPILLHQNSM 652

Query: 235  QESEPDVHPDVTLGQLHPPEAEACSLQSKGTKSVDSSHTGSEQDLNP------AKDVHSK 74
              +EP  H +  LG L   E++  S QSK     + S+  SEQ           KDVHSK
Sbjct: 653  --NEPVGHMNHQLGVL---ESDPKSEQSKSPTLANDSNCVSEQGKPSQTCQPHVKDVHSK 707

Query: 73   HYGGSVRSCTKVHKQGIALGRSVD 2
               GS RSCTKVHKQGIALGRSVD
Sbjct: 708  PQSGSSRSCTKVHKQGIALGRSVD 731


>ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
            gi|223550215|gb|EEF51702.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 844

 Score =  115 bits (287), Expect = 1e-23
 Identities = 90/260 (34%), Positives = 120/260 (46%), Gaps = 8/260 (3%)
 Frame = -3

Query: 757  RHEPVLTDILS-FETPRGSLKG--GLFLNQTTSEINSSRNCFKDQEGEFNFLPGSWSLMP 587
            R EP  TD+LS F +   S  G    F++Q  +   +SR    DQEG+FN L   WSLM 
Sbjct: 488  RPEPTYTDLLSGFGSNADSSHGFTSSFVDQAATA--ASRKLVLDQEGKFNLLANPWSLMS 545

Query: 586  SNSYLPMNDSSLRIAAQTSESPYHKPGNATYSGFGCNPASQALGVEKXXXXXXXXXXXPN 407
            S   L +++S+ +++ Q  + PY   GN   S F   P      V++           P 
Sbjct: 546  SGLSLKLSESNTKVSVQGRDIPYQARGNIRCSAFSEYPILHGHRVDQSHGNWLMPPPPP- 604

Query: 406  SETEAASHPRFVRPQSLTPIHQESATTKASGNCMLFGFHLNSTPAVPGQALSHMNAIQES 227
            S  +  +H R   P S  P+ +        GNC LFG  L S P  P  A SH N + E 
Sbjct: 605  SHFDNLAHAR--EPVS-KPLQEHDIGKSTDGNCKLFGIPLFSNPVAPEPATSHRNMVNE- 660

Query: 226  EPDVHPDVTLGQLHPP---EAEACSLQSKGTKSVDSSHTGSEQDLN--PAKDVHSKHYGG 62
                 P     Q H P   E++  S Q + +K  D +    +        +D+  K   G
Sbjct: 661  -----PTTAHPQSHQPRALESDQRSEQPRVSKMADDNEHEKQFQSGHLHTRDIQGKTQTG 715

Query: 61   SVRSCTKVHKQGIALGRSVD 2
            S RSCTKVHKQGIALGRSVD
Sbjct: 716  STRSCTKVHKQGIALGRSVD 735


>ref|XP_002322300.1| predicted protein [Populus trichocarpa] gi|222869296|gb|EEF06427.1|
            predicted protein [Populus trichocarpa]
          Length = 852

 Score =  108 bits (270), Expect = 1e-21
 Identities = 90/258 (34%), Positives = 118/258 (45%), Gaps = 6/258 (2%)
 Frame = -3

Query: 757  RHEPVLTDILS-FETPRGSLKG--GLFLNQTTSEINSSRNCFKDQEGEFNFLPGSWSLMP 587
            RHEP  TD+LS F T   S  G    F++QT    N ++    DQ G+FN L   WS+M 
Sbjct: 497  RHEPTCTDLLSGFGTNSDSFHGFGAPFVDQTAVAANPTKKHLSDQ-GQFNLLASPWSIMS 555

Query: 586  SNSYLPMNDSSLRIAAQTSESPYHKPGNATYSGFGCNPASQALGVEKXXXXXXXXXXXPN 407
            S   L +++S+ ++  Q S+  Y    N     F   P  Q   VE+            +
Sbjct: 556  SGLLLKLSESNTKVPVQGSDVTYQARANV----FSEYPVLQGHRVEQSHKNWMMHPPPSH 611

Query: 406  SETEAASHPRFVRPQSLTPIHQESATTKA-SGNCMLFGFHLNSTPAVPGQALSHMNAIQE 230
             +  A S     +P  +    QE  + K+  GNC LFG  L  +  V  +A      I  
Sbjct: 612  FDNHANSRELMPKPVLM----QEHDSGKSLEGNCKLFGIPLKISKPVAPEAAG--TTITM 665

Query: 229  SEPDVHPDVTLGQLHPPEAEACSLQSKGTKSVDSSHTGSEQDLNP--AKDVHSKHYGGSV 56
            +EP  H      QL   E++  S QSKG+K  D +             KD H K   GS 
Sbjct: 666  NEPLSHIQPVSHQL-TFESDQKSEQSKGSKMTDENENEKPFQAGHLRTKDNHGKAQNGST 724

Query: 55   RSCTKVHKQGIALGRSVD 2
            RSCTKVHKQGIALGRSVD
Sbjct: 725  RSCTKVHKQGIALGRSVD 742


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