BLASTX nr result

ID: Dioscorea21_contig00001831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001831
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Gly...    77   1e-12
ref|XP_002511100.1| Auxin response factor, putative [Ricinus com...    76   2e-12
gb|AAP06759.1| auxin response factor-like protein [Mangifera ind...    74   1e-11
tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea m...    73   3e-11
tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea m...    73   3e-11

>ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/117 (43%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
 Frame = -3

Query: 334 ATTKASGNCMLFGFHLNSTPAVPDQALSHMNAIQESEPDVHPDATLGQLHPPEAEACSLQ 155
           A     G+C LFGF L S P VP+ +LS  N    SEP      T  Q    E +  S  
Sbjct: 618 AVKPKDGDCKLFGFSLISGPIVPEPSLSQRNV---SEPAGQMHLTAHQQRTSENDEKSDH 674

Query: 154 SKGTKSVDSSHTGSEHDF------NPAKDVHSKHYGGSVRSCTKVHKQGMALGRSVD 2
           SKG++ VD      +HD       +  KDV +K   GS RSCTKVHK+G+ALGRSVD
Sbjct: 675 SKGSRPVDDLVV-DDHDRPLQTSQSHTKDVQAKPLSGSARSCTKVHKKGIALGRSVD 730


>ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
           gi|223550215|gb|EEF51702.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 844

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/122 (38%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
 Frame = -3

Query: 352 PIHQESATTKASGNCMLFGFHLNSTPAVPDQALSHMNAIQESEPDVHPDATLGQLHPP-- 179
           P+ +        GNC LFG  L S P  P+ A SH N + E     HP     Q H P  
Sbjct: 620 PLQEHDIGKSTDGNCKLFGIPLFSNPVAPEPATSHRNMVNEPTT-AHP-----QSHQPRA 673

Query: 178 -EAEACSLQSKGTKSVDSSHTGSEHDFNP--AKDVHSKHYGGSVRSCTKVHKQGMALGRS 8
            E++  S Q + +K  D +    +        +D+  K   GS RSCTKVHKQG+ALGRS
Sbjct: 674 LESDQRSEQPRVSKMADDNEHEKQFQSGHLHTRDIQGKTQTGSTRSCTKVHKQGIALGRS 733

Query: 7   VD 2
           VD
Sbjct: 734 VD 735


>gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
          Length = 840

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 55/123 (44%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
 Frame = -3

Query: 346 HQESATTKASGNCMLFGFHLNSTPAV-PDQALSHMNAIQESEPDVHPDATLGQLHPPEAE 170
           H E+  TK   +C LFG  L S+  V P+  L H N++  +EP  H +  LG L   E++
Sbjct: 618 HHEAGKTK---DCKLFGIPLVSSSCVTPEPILLHQNSM--NEPVGHMNHQLGVL---ESD 669

Query: 169 ACSLQSKGTKSVDSSHTGSEHDFNPA-------KDVHSKHYGGSVRSCTKVHKQGMALGR 11
             S QSK     + S+  SE    P+       KDVHSK   GS RSCTKVHKQG+ALGR
Sbjct: 670 PKSEQSKSPTLANDSNCVSEQG-KPSQTCQPHVKDVHSKPQSGSSRSCTKVHKQGIALGR 728

Query: 10  SVD 2
           SVD
Sbjct: 729 SVD 731


>tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 805

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/109 (38%), Positives = 57/109 (52%)
 Frame = -3

Query: 328 TKASGNCMLFGFHLNSTPAVPDQALSHMNAIQESEPDVHPDATLGQLHPPEAEACSLQSK 149
           T+      +FGF +++T   P Q  S + AIQE      P A + +L P + E     S 
Sbjct: 601 TREGSGFKIFGFQVDTTSPSPVQLSSPLPAIQEHVLQTRPSAPVNELQPVQIECLPEGSV 660

Query: 148 GTKSVDSSHTGSEHDFNPAKDVHSKHYGGSVRSCTKVHKQGMALGRSVD 2
            T    + +   +     +KD+ SK  G S RSCTKVHKQG+ALGRSVD
Sbjct: 661 STAGTATENI--QQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVD 707


>tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 822

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/109 (38%), Positives = 57/109 (52%)
 Frame = -3

Query: 328 TKASGNCMLFGFHLNSTPAVPDQALSHMNAIQESEPDVHPDATLGQLHPPEAEACSLQSK 149
           T+      +FGF +++T   P Q  S + AIQE      P A + +L P + E     S 
Sbjct: 601 TREGSGFKIFGFQVDTTSPSPVQLSSPLPAIQEHVLQTRPSAPVNELQPVQIECLPEGSV 660

Query: 148 GTKSVDSSHTGSEHDFNPAKDVHSKHYGGSVRSCTKVHKQGMALGRSVD 2
            T    + +   +     +KD+ SK  G S RSCTKVHKQG+ALGRSVD
Sbjct: 661 STAGTATENI--QQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVD 707


Top