BLASTX nr result

ID: Dioscorea21_contig00001815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001815
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ri...   167   2e-39
ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar...   163   2e-38
ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange f...   158   7e-37
ref|XP_002894369.1| dynein light chain type 1 family protein [Ar...   157   2e-36

>ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|222840721|gb|EEE78268.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score =  167 bits (424), Expect = 1e-39
 Identities = 78/93 (83%), Positives = 87/93 (93%)
 Frame = +3

Query: 60  MLEGKALIQDTDMPVKMQLQAMSSASQALDLYDVSDCRSIATHIKKVFDMVYGPGWQCVV 239
           MLEGKALI+DTDMP+KMQ+QAM+SASQALDLYDV DC+S+A+HIKK FD+ YG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPLKMQIQAMASASQALDLYDVLDCKSVASHIKKEFDLRYGGGWQCVV 60

Query: 240 GSNFGCFFTHCKGTFIYFCLETLNFLIFKGAAS 338
           GSNFGCFFTH KGTFIYF LETLNFLIFKGA+S
Sbjct: 61  GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASS 93


>ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ricinus communis]
           gi|223544936|gb|EEF46451.1| cytoplasmic dynein light
           chain, putative [Ricinus communis]
          Length = 112

 Score =  167 bits (422), Expect = 2e-39
 Identities = 79/93 (84%), Positives = 85/93 (91%)
 Frame = +3

Query: 60  MLEGKALIQDTDMPVKMQLQAMSSASQALDLYDVSDCRSIATHIKKVFDMVYGPGWQCVV 239
           MLEGKALI+DTDMPVKMQ+QAM+ ASQALDLYDV DC+SIA HIKK FDM YG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPVKMQIQAMACASQALDLYDVLDCKSIAAHIKKEFDMKYGGGWQCVV 60

Query: 240 GSNFGCFFTHCKGTFIYFCLETLNFLIFKGAAS 338
           GSNFGCFFTH KG+FIYF LETLNFLIFKGA+S
Sbjct: 61  GSNFGCFFTHSKGSFIYFTLETLNFLIFKGASS 93


>ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar outer arm [Vitis
           vinifera] gi|297743256|emb|CBI36123.3| unnamed protein
           product [Vitis vinifera]
          Length = 95

 Score =  163 bits (413), Expect = 2e-38
 Identities = 77/93 (82%), Positives = 85/93 (91%)
 Frame = +3

Query: 60  MLEGKALIQDTDMPVKMQLQAMSSASQALDLYDVSDCRSIATHIKKVFDMVYGPGWQCVV 239
           MLEGKALI+DTDMPVKMQ+QAM+ ASQALD+YDV D +SIA +IKK FDM+YG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPVKMQIQAMACASQALDIYDVLDYKSIAAYIKKEFDMIYGTGWQCVV 60

Query: 240 GSNFGCFFTHCKGTFIYFCLETLNFLIFKGAAS 338
           GSNFGCFFTH KGTFIYF LETLNFLIFKGA+S
Sbjct: 61  GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASS 93


>ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 676

 Score =  158 bits (400), Expect = 7e-37
 Identities = 75/93 (80%), Positives = 81/93 (87%)
 Frame = +3

Query: 60  MLEGKALIQDTDMPVKMQLQAMSSASQALDLYDVSDCRSIATHIKKVFDMVYGPGWQCVV 239
           MLEGKAL+QDTDMP KMQ+QAM +AS+ALDLYDV DC+SIA HIKK FD  YG GWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 240 GSNFGCFFTHCKGTFIYFCLETLNFLIFKGAAS 338
           GSNFGCFFTH KG+FIYF LETLNFLIFKG  S
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS 93


>ref|XP_002894369.1| dynein light chain type 1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297340211|gb|EFH70628.1| dynein light chain
           type 1 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 94

 Score =  157 bits (397), Expect = 2e-36
 Identities = 74/93 (79%), Positives = 83/93 (89%)
 Frame = +3

Query: 60  MLEGKALIQDTDMPVKMQLQAMSSASQALDLYDVSDCRSIATHIKKVFDMVYGPGWQCVV 239
           MLEGKA+++D+DMPVKMQ+QAMS ASQALDL+DV DC+SIA HIKK FD  YG GWQCVV
Sbjct: 1   MLEGKAMVEDSDMPVKMQMQAMSFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 240 GSNFGCFFTHCKGTFIYFCLETLNFLIFKGAAS 338
           GSNFGCFFTH KGTFIYF LETL FLIFKGA++
Sbjct: 61  GSNFGCFFTHSKGTFIYFQLETLKFLIFKGAST 93


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