BLASTX nr result

ID: Dioscorea21_contig00001803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00001803
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539856.1| PREDICTED: 50S ribosomal protein L1, chlorop...   422   e-116
ref|XP_003534390.1| PREDICTED: 50S ribosomal protein L1, chlorop...   422   e-116
ref|XP_002314057.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
gb|ABK95268.1| unknown [Populus trichocarpa]                          421   e-115
ref|XP_002298416.1| predicted protein [Populus trichocarpa] gi|2...   419   e-115

>ref|XP_003539856.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Glycine max]
          Length = 340

 Score =  422 bits (1086), Expect = e-116
 Identities = 205/241 (85%), Positives = 228/241 (94%)
 Frame = +1

Query: 349  LPLKRDRRRSKRFLEIQKLRENKKEYDVPTGIALVRQTANTKFVESVEAHFRLNLDPKYN 528
            LPLKRDR RSKRFLEIQ+LRE KKEYD+ T I+LV++TA TKFVE+VEAHFRLN+DPKYN
Sbjct: 99   LPLKRDRTRSKRFLEIQQLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYN 158

Query: 529  DQQLRATVNLPKGTGQKVKVAVLTQGEKIDEAKNAGADIVGGEELIQQIKDGFMEFDKLI 708
            DQQLRATVNLPKGTG+ VKVAVLTQGEK DEAKNAGAD+VGGE+LI+QIK GFMEFDKLI
Sbjct: 159  DQQLRATVNLPKGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAGFMEFDKLI 218

Query: 709  ASPDMMPKVASLGKLLGPRGLMPNPKAGTVATDIPQAIQEFKKGKVEFRVDKTGIVHLPF 888
            ASPDMMPKVASLGK+LGPRGLMPNPKAGTV  +IPQAI EFK+GKVE+R DKTGIVHLPF
Sbjct: 219  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPF 278

Query: 889  GKVNFPDEDLIVNLIAAVRSVEANKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDYKPP 1068
            GK +FP+EDL+VNL+AAV+SVEANKPSGAKGVYWKSAHICS+MGPSIRLNIREMLDY+PP
Sbjct: 279  GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSAHICSAMGPSIRLNIREMLDYRPP 338

Query: 1069 T 1071
            +
Sbjct: 339  S 339


>ref|XP_003534390.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Glycine max]
          Length = 345

 Score =  422 bits (1086), Expect = e-116
 Identities = 205/241 (85%), Positives = 228/241 (94%)
 Frame = +1

Query: 349  LPLKRDRRRSKRFLEIQKLRENKKEYDVPTGIALVRQTANTKFVESVEAHFRLNLDPKYN 528
            LPLKRDR RSKRFLEIQ+LRE KKEYD+ T I+LV++TA TKFVE+VEAHFRLN+DPKYN
Sbjct: 104  LPLKRDRTRSKRFLEIQQLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYN 163

Query: 529  DQQLRATVNLPKGTGQKVKVAVLTQGEKIDEAKNAGADIVGGEELIQQIKDGFMEFDKLI 708
            DQQLRATVNLPKGTG+ VKVAVLTQGEK DEAKNAGAD+VGGE+LI+QIK GFMEFDKLI
Sbjct: 164  DQQLRATVNLPKGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAGFMEFDKLI 223

Query: 709  ASPDMMPKVASLGKLLGPRGLMPNPKAGTVATDIPQAIQEFKKGKVEFRVDKTGIVHLPF 888
            ASPDMMPKVASLGK+LGPRGLMPNPKAGTV  +IPQAI EFK+GKVE+R DKTGIVHLPF
Sbjct: 224  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPF 283

Query: 889  GKVNFPDEDLIVNLIAAVRSVEANKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDYKPP 1068
            GK +FP+EDL+VNL+AAV+SVEANKPSGAKGVYWKSAHICS+MGPSIRLNIREMLDY+PP
Sbjct: 284  GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSAHICSAMGPSIRLNIREMLDYRPP 343

Query: 1069 T 1071
            +
Sbjct: 344  S 344


>ref|XP_002314057.1| predicted protein [Populus trichocarpa] gi|222850465|gb|EEE88012.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  421 bits (1082), Expect = e-115
 Identities = 205/241 (85%), Positives = 226/241 (93%)
 Frame = +1

Query: 349  LPLKRDRRRSKRFLEIQKLRENKKEYDVPTGIALVRQTANTKFVESVEAHFRLNLDPKYN 528
            LPLKRDR RSKRFLEIQKLRE KKEYD+ T I+++++TANTKFVESVEAHFRLN+DPKYN
Sbjct: 87   LPLKRDRTRSKRFLEIQKLRETKKEYDLGTAISMLKKTANTKFVESVEAHFRLNIDPKYN 146

Query: 529  DQQLRATVNLPKGTGQKVKVAVLTQGEKIDEAKNAGADIVGGEELIQQIKDGFMEFDKLI 708
            DQQLRATVNLPKGTGQ VKVAVLTQGEK DEAKNAGAD+VGGE+LIQQIK GFM+FDKLI
Sbjct: 147  DQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIQQIKGGFMQFDKLI 206

Query: 709  ASPDMMPKVASLGKLLGPRGLMPNPKAGTVATDIPQAIQEFKKGKVEFRVDKTGIVHLPF 888
            ASPDMMPKVASLGK+LGPRGLMPNPKAGTV TDIPQAI EFK+GKVE+R DKTGIVH+PF
Sbjct: 207  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTTDIPQAIAEFKRGKVEYRADKTGIVHIPF 266

Query: 889  GKVNFPDEDLIVNLIAAVRSVEANKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDYKPP 1068
            GK +F +EDL+VNL+AAV+S EANKPSGAKGVYWKSAHICSSMGPSIRLN REML+YK P
Sbjct: 267  GKADFSEEDLLVNLLAAVKSAEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLEYKLP 326

Query: 1069 T 1071
            +
Sbjct: 327  S 327


>gb|ABK95268.1| unknown [Populus trichocarpa]
          Length = 355

 Score =  421 bits (1082), Expect = e-115
 Identities = 205/241 (85%), Positives = 226/241 (93%)
 Frame = +1

Query: 349  LPLKRDRRRSKRFLEIQKLRENKKEYDVPTGIALVRQTANTKFVESVEAHFRLNLDPKYN 528
            LPLKRDR RSKRFLEIQKLRE KKEYD+ T I+++++TANTKFVESVEAHFRLN+DPKYN
Sbjct: 113  LPLKRDRTRSKRFLEIQKLRETKKEYDLGTAISMLKKTANTKFVESVEAHFRLNIDPKYN 172

Query: 529  DQQLRATVNLPKGTGQKVKVAVLTQGEKIDEAKNAGADIVGGEELIQQIKDGFMEFDKLI 708
            DQQLRATVNLPKGTGQ VKVAVLTQGEK DEAKNAGAD+VGGE+LIQQIK GFM+FDKLI
Sbjct: 173  DQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIQQIKGGFMQFDKLI 232

Query: 709  ASPDMMPKVASLGKLLGPRGLMPNPKAGTVATDIPQAIQEFKKGKVEFRVDKTGIVHLPF 888
            ASPDMMPKVASLGK+LGPRGLMPNPKAGTV TDIPQAI EFK+GKVE+R DKTGIVH+PF
Sbjct: 233  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTTDIPQAIAEFKRGKVEYRADKTGIVHIPF 292

Query: 889  GKVNFPDEDLIVNLIAAVRSVEANKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDYKPP 1068
            GK +F +EDL+VNL+AAV+S EANKPSGAKGVYWKSAHICSSMGPSIRLN REML+YK P
Sbjct: 293  GKADFSEEDLLVNLLAAVKSAEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLEYKLP 352

Query: 1069 T 1071
            +
Sbjct: 353  S 353


>ref|XP_002298416.1| predicted protein [Populus trichocarpa] gi|222845674|gb|EEE83221.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  419 bits (1078), Expect = e-115
 Identities = 206/241 (85%), Positives = 225/241 (93%)
 Frame = +1

Query: 349  LPLKRDRRRSKRFLEIQKLRENKKEYDVPTGIALVRQTANTKFVESVEAHFRLNLDPKYN 528
            LPLKRDR RSKRFLEIQKLRE KKEYD+   I+L+++TA+TKFVES EAHFRLN+DPKYN
Sbjct: 113  LPLKRDRTRSKRFLEIQKLREIKKEYDLGAAISLLKKTASTKFVESAEAHFRLNIDPKYN 172

Query: 529  DQQLRATVNLPKGTGQKVKVAVLTQGEKIDEAKNAGADIVGGEELIQQIKDGFMEFDKLI 708
            DQQLRATVNLPKGTGQ VKVAVLTQGEK DEAKNAGAD+VGGE+LIQQIK G+MEFDKLI
Sbjct: 173  DQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIQQIKGGYMEFDKLI 232

Query: 709  ASPDMMPKVASLGKLLGPRGLMPNPKAGTVATDIPQAIQEFKKGKVEFRVDKTGIVHLPF 888
            ASPDMMPKVASLGK+LGPRGLMPNPKAGTV TDIPQAI EFKKGKVE+R DKTGIVH+PF
Sbjct: 233  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHIPF 292

Query: 889  GKVNFPDEDLIVNLIAAVRSVEANKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDYKPP 1068
            GK +F +EDL+VNL+AAV+SVEANKPSGAKGVYWKSAHICSSMGPSIRLN REMLDYK P
Sbjct: 293  GKADFSEEDLLVNLLAAVKSVEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLDYKLP 352

Query: 1069 T 1071
            +
Sbjct: 353  S 353


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